Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP009273	2004725	2004749	25	2 [1]	[1] 2	yedN	pseudogene, IpaH/YopM family

ACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTCCAGTGACACAATTGCGCCTAATTAATTACATTTAATATTTAATTATGAGTTCCTCA  >  CP009273/2004566‑2004728                                                                                                                                                               |     aCGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTCCAGTGACACAATTGCGCCTAATTAATTACATTTAATATTTAATTATGAGTTc      >  1:180316/1‑159 (MQ=255)     agcaCATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTCCAGTGACACAATTGCGCCTAATTAATTACATTTAATATTTAATTATGAGTTCCTCa  <  2:180312/159‑1 (MQ=255)                                                                                                                                                               |     ACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTCCAGTGACACAATTGCGCCTAATTAATTACATTTAATATTTAATTATGAGTTCCTCA  >  CP009273/2004566‑2004728

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑