New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 239496	35 (1.020)	7 (0.210)	6/310	1.9	14.8%	coding (295/2445 nt)	fadE	acyl coenzyme A dehydrogenase
	?	CP009273	= 239679	47 (1.430)					coding (112/2445 nt)	fadE	acyl coenzyme A dehydrogenase
Rejected: Frequency below/above cutoff threshold.

CGCTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGTGCCCGCATCAATCGCTTCTTTCTCAGTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGAAAAGCCCCTTACTTGTAGGAGGTCTGACCACTTGTGATGATATGGTTGTAGTGGATGTAAAAACATTTAGCAATATGTTTACAATATAATTACAACAAAGCTCACATTGTTGCTGTTTTTATCCGCACTTCAGGTCAAAAAGTCCT  >  CP009273/239413‑239941                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                       cGCTTGCTCTGTGGCGGTCAGGGGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGGCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCAGAGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGggcgg                                                                                                                                                                                                                                                                <  1:601638/275‑1 (MQ=255)                    aGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGTGCCCGCATCAATCGCTTCTTTCTCAGTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTACAGGCGAGCAAAAt                                                                                                                                                                                                                                             >  1:7259/1‑275 (MQ=255)                         cgccTGCGAATAGTTCTGCAGCTTTTTCCAGCCCGGCTTGCCCTGGAACAAGTCGCCCTCCCCCCAGGTGCTGCCCGCATCAATCGCTTCTTTCTCAGTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGAc                                                                                                                                                                                                                                        <  2:7258/272‑1 (MQ=255)                         cgGCTGCGGATATTTCTGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGTGCCCGCATCAATCGCTTCTTTCTCACTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGAc                                                                                                                                                                                                                                        <  1:356564/275‑1 (MQ=255)                           gCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGTGCCCGCATCAATCGCTTCTTTCTCAGTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGCCTTACGCATAGGCGCAAAGTAAAATGGCACGAGGATAATGGCCAGAGGAACCAGTACCCACGCCGACAACAGACCAGCAACGCCGAGGGCGGCTGTCAAGGCGAGCAAAATAAGActg                                                                                                                                                                                                                                      >  1:347855/1‑275 (MQ=255)                                      ttATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGTGCCCGCATCAATCGCTTCTTTCTCAGTGCGCGACCTCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGataaataa                                                                                                                                                                                                                           >  1:100036/1‑275 (MQ=255)                                               agtttCCAGTCCGGCTTGCCCTGGAACAAGACGCCCTCCCACCAGGTGGTGCCCGCATCAATCGCTTCGTTCTAGGTGCGCGACATCGGCGGCATCACCTTACGCAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACACCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCAcgc                                                                                                                                                                                                                   <  1:201599/272‑1 (MQ=255)                                                            gCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGTGCCCGCATCAATCGCTTCTTTCTCAGTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCCCGAGGATAATGGCCAGAGGCACCAGTACCCACACCGACCACAGACCAGCAACGCCGAGGGAGGCTGTCCAGGCGCGCAAAATCAGACCGCCGACAAATAAGCCCACCCGCGGCTAGaaacg                                                                                                                                                                                                      >  2:201597/1‑271 (MQ=255)                                                                                               gtgCCCGCATCAATCGCTTCTTTCTCTGTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGAGGCTNTCCAGGCGNGCAAAATCAGACTGCTGATAAATAAGCACACGCGCAGATAGAACAACGCGCCGAACAGGACAACCGTAGCAAGAAAACTCaa                                                                                                                                                                  >  1:444757/1‑275 (MQ=255)                                                                                               gtgCCCGCATCAATCGCTTCTTTCTCAGTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGTTAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACCGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAAGACAACCGTAGCGAGaactgact                                                                                                                                                                   >  1:306254/1‑268 (MQ=255)                                                                                                    cGCATCAATCGCTTCTTTCTCAGTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCCCACGCGGTGATAGAACAACGCGCGGAGCAGGACAAACGTAGCAAGAATACTCaaaaac                                                                                                                                                              >  1:158940/1‑272 (MQ=255)                                                                                                     gCATCAATCGCTTCTTTCTCAGTGCGCTACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCAGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAatcat                                                                                                                                                            <  1:318324/275‑1 (MQ=255)                                                                                                          aaTCGCTTCTTTCTCAGTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAAt                                                                                                                                                                                                                                             >  2:579638/1‑189 (MQ=255)                                                                                                              gCTTCTTTCTCAGTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGa                                                                                                                                                                                                                                         <  1:579647/189‑1 (MQ=255)                                                                                                                   tttctCAGTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAATATCAGACTGCTGATAAATAAGCTc                                                                                                                                                                                                                       >  1:301050/1‑202 (MQ=255)                                                                                                                     tctcAGTGCGAGACATCGGCGGCATCTCATTACGTAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGGTAAATGGCACGAGGATGATGGCAAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAAGCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGAAAAGcccc                                                                                                                                            <  1:103315/275‑1 (MQ=255)                                                                                                                     cgcgggcgcgcGACAGCAGGGGCATCACCTCAAGGAAAGCGAGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGAAAAGcccc                                                                                                                                            <  2:100035/268‑1 (MQ=255)                                                                                                                          gTGCGCGACATCGGCGGCATCACAGTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGACGACCAAAGACCAGCAACGACGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACAGCAGNTAAATAAGCCCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGAGAGAATACTCAAAACAATAAAAACGaaaaacaccataa                                                                                                                                        >  1:480081/1‑265 (MQ=255)                                                                                                                             cgcgACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATAATAACGAAAAGCCCCTAACTTg                                                                                                                                     >  1:21816/1‑274 (MQ=255)                                                                                                                                     cggcggCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACGAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAAAGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAAACATCATAACGAAAAGCCCATTACATGAaggaggac                                                                                                                            >  1:210350/1‑273 (MQ=255)                                                                                                                                            aTCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCCAGGGCGGCTGTCCACGCGCGCAAAATCACNCTACTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGa                                                                                                                                                                                              >  1:594444/1‑202 (MQ=255)                                                                                                                                               aacannnnaaaaCCGCGAANAACCGGCGCAGAAACGAGCAACGTACGCATAGGCGCAAAGTTAAATGGCACGAGCATAACGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCAGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGAAAAGCCCCTTACTTGTAGGAGGTCTGAc                                                                                                                        <  2:31053/260‑1 (MQ=255)                                                                                                                                                      ggAAACCGCGAAATACCGGCGAGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGAAAAGCCCCTTACTTGTAGGAGGTCTGACCACTTGtgatga                                                                                                            <  1:392059/274‑1 (MQ=255)                                                                                                                                                      ggAAACCGCGAAATACCGGAGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAAGGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGCCCACAGCCCAGCAACGCCGAGGGCTGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGAAAAGCCCCTTACTTGTAGGAGGTCTGACCACTTGtgatga                                                                                                            <  1:80493/274‑1 (MQ=255)                                                                                                                                                          aCCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCgagggcgacttgttccagggcaagccggactggaaaaagctgcataactatccgcagccgcgcctgaccgccgaagagcaagcgtttctcgacggcccggtagaagaagcctgccggatggcgcatgatttccagatcacccatgagatntgggatctgcg                                                                                                       <  2:73270‑M2/275‑162 (MQ=255)                                                                                                                                                          aCCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCgagggcgacttgttccagggcaagc                                                                                                                                                                                                                                               <  2:237102‑M2/139‑26 (MQ=255)                                                                                                                                                          aCCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGAGCAGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCAAAACGAAAAGCCCATTACTTGTACGAGGTc                                                                                                                            >  1:31054/1‑254 (MQ=255)                                                                                                                                                           ccGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCgagggcgacttgttccagggcaagccggactggaaaaagctgcataactatccgcagccgcgcctgaccgcagaagagcaagcgtttctcgacggcccggtagaagaagcctgccggatggcgaatgatttccagatccaccataagctggcggatctgacg                                                                                                      <  1:290598‑M2/275‑163 (MQ=255)                                                                                                                                                              cgAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCgagggcgacttgttccagggcaagccgga                                                                                                                                                                                                                                           >  1:237105‑M2/1‑110 (MQ=255)                                                                                                                                                              cgAAATACCGGCGCGGAAATCAGCGACTTACGCATAGGCGCAAAGTTAAAGGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCgagggcgacttgttccagggcaagccggactggaaaaagctgcataactatccgcagccgcgcctgaccgccgaagagcaagcgtttctcgacggcccggtagaagaagcctgccggatggcgaatgatttccagatcacccatgagctggcggatctgccgcc                                                                                                    >  1:73271‑M2/1‑110 (MQ=255)                                                                                                                                                                                        cTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCgagggcgacttgttccagggcaagccggactggaaaaagctgcataactatccgcagccgcgcctgaccgccgaagagcaagcgtttctcgacggcccggtagaagaagcctgccggagggcgaatgatttccagatcacccatgagctggcggatctgccgccggagttgtgggcgtccctgcaagag                                                                           <  2:102778‑M2/273‑190 (MQ=255)                                                                                                                                                                                                  ggCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCt                                                                                                                                                                                                                        >  2:213236/1‑122 (MQ=255)                                                                                                                                                                                                      cAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCAcg                                                                                                                                                                                                                    <  1:213238/122‑1 (MQ=255)                                                                                                                                                                                                                   cACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCga                                                                                                                                                                                                                                                                      <  2:436676‑M2/59‑3 (MQ=255)                                                                                                                                                                                                                   cACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGAAAAGCCCCTTACTTGTAGGAGGTc                                                                                                                            >  2:14414/1‑197 (MQ=255)                                                                                                                                                                                                                     cGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGTCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGa                                                                                                                                                    >  1:94908/1‑171 (MQ=255)                                                                                                                                                                                                                     cGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAAt                                                                                                                                                                                                                                             >  2:280076/1‑82 (MQ=255)                                                                                                                                                                                                                     cGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGAAAAGCCCCTTACTTGTAGGAGGTCTGACCACTTGTGATGATATGGTTGTATGGGATGTAAAAACAtt                                                                                 >  2:261438/1‑238 (MQ=255)                                                                                                                                                                                                                     cGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGAAAAGCCCCTTACTTGTAGGAGGCCTGACCACTTGTGATGATATGGTTGTAGTGGATGTAAAAACATTTAGAAATAAGATTACAATAGAATTACAAAAAAGccaa                                            >  1:17610/1‑272 (MQ=255)                                                                                                                                                                                                                      gAGGATAAGGGCACGGGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCgagggcgacttgttccagggcaagccggactggaaaaagctgcataactatccgcagccgcgcctgaccgccgaagagcaagcgtttctcgacggcccggtagaagaagcctgccggatggcgaatgatttccagatcacccatgagctggcggatctgccgccggagttgtgggcgtaccttaaagagcatcgtttcttcgcgatgatcatcaaaaaaga                                           >  1:102779‑M2/1‑54 (MQ=255)                                                                                                                                                                                                                       aGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCgagggc                                                                                                                                                                                                                                                                  >  1:436681‑M2/1‑53 (MQ=255)                                                                                                                                                                                                                       aGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGAAAAGCCCCTTACTTGTAGGAGGTCTGAc                                                                                                                        <  1:14415/197‑1 (MQ=255)                                                                                                                                                                                                                        ggATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGAAAAGCCCCTTACTTGTAGGAGGTCTGAACACTTGTGATGATAAGGTGGTAGTGGATGTAAAAACATTTAGCAATATGTTTAAAAAATAATTACAAAAAAgaacaaaa                                         >  1:151546/1‑268 (MQ=255)                                                                                                                                                                                                                         gagaaTGGCCAGAGGCACCAGTCCCCACGCCGACCACAGACCAGCAACGCCGAGGTCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGAAAAg                                                                                                                                                <  2:94907/168‑1 (MQ=255)                                                                                                                                                                                                                         gATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGa                                                                                                                                                                                                                                         <  1:280080/82‑1 (MQ=255)                                                                                                                                                                                                                                  cAGAGGCACCAGTACCCACCCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGAAAAGCCCCTTACTTGTAGGAGGTCTGACCACTTGTGATGATATGGTTGTAGTGGATGTAAAAACATTTAGCAATATGTTTACAATATAATTATAACAAAGCTCACATTGTTGCTGtt                               >  1:552443/1‑275 (MQ=255)                                                                                                                                                                                                                                               aCCCACGCCGACCACGGACCAGCTTCGCGGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCt                                                                                                                                                                                                                        >  1:486068/1‑77 (MQ=255)                                                                                                                                                                                                                                                   aCGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCAcg                                                                                                                                                                                                                    <  2:486061/77‑1 (MQ=255)                                                                                                                                                                                                                                                     gCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCAc                                                                                                                                                                                                                     >  1:302650/1‑74 (MQ=255)                                                                                                                                                                                                                                                        gACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGAAAAGCCCCTTACTTGTAGGAGGTCTGACCACTTGTGATGATATGGTTGTAGTGGATGTAAAAACATTTAGCAATATGTTTACAATATAATTACAACAAAGCTCACATTGTTGCTGTTTTTATCAGCACTTAAGGTCaaa         >  1:297990/1‑275 (MQ=255)                                                                                                                                                                                                                                                         aCCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCgg                                                                                                                                                                                                                 <  2:302646/74‑1 (MQ=255)                                                                                                                                                                                                                                                               acccAGCACCGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGAAAAGCCCCTTACTTGTAGGAGGTCTGACCACTTGTGATGATATGGTTGTAGTGGATGTAAAAACATTTAGCAATATGTTTACAATATAATTACAACAAAGCTCACATTGTTGCTGTTTTTATCCGCACTTCAGGTCAAAAAGTCCt  <  2:210348/273‑1 (MQ=255)                                                                                                                                                                                                                                                                   aGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTNATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGAAAAGCCCCTTACTTGTAGGAGGTCTGACCACTTGTGATGATATGGTTGTAGTGGATGTAGAAACATTTAGCAATACGTTTACAATATAATTACAACACAGCTca                                            <  1:511620/229‑1 (MQ=255)                                                                                                                                                                                                                                                                     cAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGc                                                                                                                                                                              >  1:418245/1‑97 (MQ=255)                                                                                                                                                                                                                                                                        cGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGAAAAg                                                                                                                                                >  1:213732/1‑124 (MQ=255)                                                                                                                                                                                                                                                                         gCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCgaga                                                                                                                                                                          <  2:418241/97‑1 (MQ=255)                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                       CGCTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGTGCCCGCATCAATCGCTTCTTTCTCAGTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGAAAAGCCCCTTACTTGTAGGAGGTCTGACCACTTGTGATGATATGGTTGTAGTGGATGTAAAAACATTTAGCAATATGTTTACAATATAATTACAACAAAGCTCACATTGTTGCTGTTTTTATCCGCACTTCAGGTCAAAAAGTCCT  >  CP009273/239413‑239941

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.