New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 3615324	NA (NA)	4 (0.120)	4/306	2.4	100%	coding (2773/4236 nt)	rhsB	Rhs family putative polymorphic toxin, putative neighboring cell growth inhibitor
	?	CP009273	= 3615424	0 (0.000)					coding (2873/4236 nt)	rhsB	Rhs family putative polymorphic toxin, putative neighboring cell growth inhibitor

CGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACGATACAGAACGACAGGAGCCGCATCCAGACGATTT  >  CP009273/3615229‑3615693                                                                                                                                                                                                    |                                                                                                                                                                                                                                                                              ccaatcTCGATATCTGCATCCCGTATTCCACAGACCCGGCAGGTAACCGCCTGCCCGACCCGGAGCTGCCCCCGGACAGCACCCTCACCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGTCAGGCTGACAGAGAAAACCGACCTCATCCTGGAAGGGGTTATCCG                                                                                                                                                                                                                                                                               >  1:306333‑M2/3‑196 (MQ=255)         gATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCG                                                                                                                                                                                                                                                                               >  1:336035‑M2/1‑188 (MQ=255)                                                                                                                    tGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCG                                                                                                                                                                                                                                                                               >  1:523676‑M2/1‑81 (MQ=255)                                                                                                                                                                cAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGgccacatgctgagggtgctgtccgggtgcagctccgggtc                                                                                                                                                                                                                                       <  1:7928‑M2/77‑41 (MQ=255)                                                                                                                                                                    gaAAACCGACCTCATCCCGGAAGGGGTTATCCGgccacatgctgagggtgctgtccgggtgcagctccgggtcgggcaggcggtta                                                                                                                                                                                                                          >  2:23689‑M2/1‑33 (MQ=255)                                                                                                                                                                    gaAAACCGACCTCATCCCGGAAGGGGTTATCCGgccacatgctgagggtgctgtccgggtgcagctccgggtcgggc                                                                                                                                                                                                                                   >  2:7927‑M2/1‑33 (MQ=255)                                                                                                                                                                             cgtatcgcgggccggggttagcgggccgcttgctggggggcgtgtccgggtgctgctccgggtcgggcaggcggttacctgcggggtctggggcatgcgggatgcggatagccagattcgctgcggtggtgggaacgccggtcagcctgccggtggtgctgtagctgtaactccgggtctggcgcgggctgctgatgcggatgagttcgccgttgtcgttccaggtgtaatcgcggtcagacagcaggctgttcaggtgctggctctgtaactg                     >  2:141828‑M2/14‑24 (MQ=255)                                                                                                                                                                               gcgnggggcnnnnggtgatccggccgcaggcggatggtggtgtccgggtgccgctgcgggtcgggcaggctgtgtcttggcgggtttgtggcagacgggatgcggatatccggattcgctgcggtggtgtgagcgccggtcagcctgccggtggtgctgtagctgtaactccgggtctggcgcgggctgctgatgcggatgagttcgccgttgtcgttccaggtgtaatcgcggtcagacagcaggctgttcaggtgctggctctgtaactgcc                   >  2:63010‑M2/14‑22 (MQ=255)                                                                                                                                                                                            ggTTATCCGgccacatgctgagggtgctgtccgggtgcagctccgggtcggacaggcggttacctgccgggtctgtggtatacgggatgcggatatccagatt                                                                                                                                                                                 >  1:582954‑M2/1‑9 (MQ=255)                                                                                                                                                                                              ttATCCGgccacatgctgagggtgctgtccgggtgcagctccgggtcgggcaggcggttacctgccgggtctgtggcatacgggatgcggatatccagattcgctgcggtggtgtgaacgccggtcagcctgccggtggtgctgtagctgtaactccgggtctggcgcggg                                                                                                           <  1:63558‑M2/171‑165 (MQ=255)                                                                                                                                                                                               tATCCGgccacatgctgagggtgctgtccgggtgcagctccgggtcgggcaggcggttacctgccgggtctgtggcatacgggat                                                                                                                                                                                                <  1:217830‑M2/85‑80 (MQ=255)                                                                                                                                                                                                aTCCGgccgcatgttggtggtggtgtcctggggcagctccgggtcgggcaggcggttacctgcggggtctgtggcatacggggtgcggatatccagattcgctgcggtggtgtgaacgccggtcagcctgccggtggtgctgtagctgtaactccgggtctggcgcgggctgctgatgcggatgagttcgccgttgtcgttccaggtgtaatcgcggtcagacagcaggctgttcaggtgctggctctgtaactgcccggcaggggtataagcg  >  1:72954‑M2/1‑5 (MQ=255)                                                                                                                                                                                                 tCCGgccacatgctgagggtgctgtccgggtgcagctccgggtcgggcaggcggttacctgccgggtctgtggcatacgggatgcggatatccagattcgctgcggtggtgt                                                                                                                                                                   <  1:54429‑M2/112‑109 (MQ=255)                                                                                                                                                                                                 tCCGgccacatgctgagggtgctgtccgggtgcagctccgggtcgggcaggcggttacctgccgggtctgtggcatac                                                                                                                                                                                                     <  1:427566‑M2/78‑75 (MQ=255)                                                                                                                                                                                                  ccGgccacatgctgagggtgctgtccgggtgcagctccgggtcgggcaggcggttacctgccgggtctgtggcatacgggatgcggatatccagattcgctgcggtggtgtgaacgccggtcagcctgccggtggtgctgtagctgtaactccgggtctggcgcgggctgc                                                                                                       >  2:63557‑M2/1‑3 (MQ=255)                                                                                                                                                                                                   cGgccacatgctgagggtgctgtccgggtgcagctccgggtcgggcaggcggttacctgccgggtctgtggcatacgggatgcgg                                                                                                                                                                                            >  2:217828‑M2/1‑2 (MQ=255)                                                                                                                                                                                                   cGgccacatgctgagggtgctgtccgggtgcagctccgggtcgggcaggcggt                                                                                                                                                                                                                            <  1:440105‑M2/53‑52 (MQ=255)                                                                                                                                                                                                    |                                                                                                                                                                                                                                                                              CGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACGATACAGAACGACAGGAGCCGCATCCAGACGATTT  >  CP009273/3615229‑3615693

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.