New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 3824404	40 (1.170)	11 (0.340)	7/302	1.7	21.7%	coding (588/1710 nt)	yicH	putative inner membrane‑anchored periplasmic AsmA family protein
	?	CP009273	= 3824452	42 (1.310)					coding (636/1710 nt)	yicH	putative inner membrane‑anchored periplasmic AsmA family protein

TGCGTGATATGGCGTTTAATAGCCCGAATAGCGAATGGAAACTGAGCGCGCAGCGGGTAAATGGCGGCGTAGTTCCGTGGTCACCAAAAGCCGGTAAAGTGCTGGGTACGAAGGCGCAGATTCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGTCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAAGGCAAACTGTC  >  CP009273/3824193‑3824700                                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                         tGCGTTATTTTGCGTTTAATAGTCCGACTATCTAATGGAAACTGAGCGCGCAGCGGGTAAATGGCGGCTTAGTTCCGTGGTCACCAAAAGNCGGTAAAGTGCTGGGTACGAAGGCGCAGATTCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACTGTAACCGGAAACGTGCAGCGTAACGCCGa                                                                                                                                                                                                                                            <  1:494542/274‑1 (MQ=255)            gCGTTTAATAGCCCGAATAGCGAATGGAAACTGGGCGCGCAGCGGGTAAATGGCGGCGTAGTTCCGTGGTCACCAAAAGCCGGTAAAGGGCTGGGTACGAAGGCGCAGATTCAGTTTAGTGCCGGATCGCTTTAGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCa                                                                                                                                                                                                                                <  1:387024/275‑1 (MQ=255)                           aaTAGCGAATGGAAACTGAGCGCGCAGCGGGTAAATGGCGGCGTAGTTCCGTGGTCACCAAAAGCCGGTAAAGTGCTGGGTACGAAGGCGCAGATTCAGTTTAGTGCCGGATCGCTTTCGCTCCATGATGTTACTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATAGCGTTACGCTGACTAACCTGGGTGACGACATCGCCTGCGGGACATTAACCGGAAACGCGGAACGAAACCGAGACGGCAGGTGGCAAGTGGAAAACATgag                                                                                                                                                                                                                 >  1:208419/1‑273 (MQ=255)                           aaTAGCGAATGGAAACTGAGCGCGCAGCGGGTAAATGGCGGCGTAGTTCCGTGGTCACCAAAAGCCGGTAAAGTGCTGGGTACGAAGGCGCAGATTCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCCCAGCGTAAAGCCAACGGCAGCTAGCAAGTGAAAAACCGgcg                                                                                                                                                                                                                 >  1:302749/1‑275 (MQ=255)                                                                   gcgTAGTTCCGTGGTCACCAAAAGCCGGTAAAGTGCTGGGTACGAAGGCGCAGATTCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTACCGCCGACGGCAGCTGGAAAGTGCAAAACCCGCGCGTGGCGGCTATATGTCTCCAAAGAGaaaaaatgccaac                                                                                                                                                                          >  2:100123/1‑266 (MQ=255)                                                                              tGGTCACCAAAAGCCGGTAAAGTGCTGGGTACGAAGGCGCAGATTCAGTTTAGTGCCGGATAGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAAACGGAAACGCGCAGCGTAACGCCGACGGCAACTGGCAAGTGGAAAACCGGACCAGGGCGGATATGAGTCTACACAGCGAAAAAACGCCAAcctgtcgcttat                                                                                                                                                               >  2:279207/1‑264 (MQ=255)                                                                                                         ggTACGAAGGCGCAGATTCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACCTTAACCGGAAACGCGCAGCGTAACGCTGACGGCAGCTGGCAAGTGGAAACCCTGCGCCTGGCGGATATCCGTCTACAAAGCGCAAAATAGCTAACCGACTTCTTTGCGACATTACGCTCTGCACCGTCGTTGCa                                                                                                                                   >  1:347545/1‑275 (MQ=255)                                                                                                         ggTACGAAGGCGCAGATTCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACGAGAAACGCGCANCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGTCTACAAAGCGAAAAATCGCTAACCGACCTCTTTGAGCCAATAAGCTCTGTCCcgtacttgaa                                                                                                                                   >  1:592179/1‑268 (MQ=255)                                                                                                                   cgcAGATTCAGTTTAGTGCAGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGGTTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGTCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCACTTTCCCGTCGTTGCAGATTGGTCGc                                                                                                                         >  1:549318/1‑275 (MQ=255)                                                                                                                     cAGATTCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCAGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAACTGGCAAGTGGAAAACCTGCGCATGGCGGATATCCGGCTACAAAACGAACAATCGCTAAACGAACTCTTTGCGACAACAAGCTCTGTCAAGTCGTTGCAGATTGGACGccg                                                                                                                       >  1:194035/1‑274 (MQ=255)                                                                                                                         ttCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAAcgcg                                                                                                                                                                                                                                                          <  1:261249/140‑1 (MQ=255)                                                                                                                                   tGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACATGCGCATGGCg                                                                                                                                                                                                          >  2:425214/1‑178 (MQ=255)                                                                                                                                       ggATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGata                                                                                                                                                                                                      <  1:425219/178‑1 (MQ=255)                                                                                                                                             cTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCa                                                                                                                                                                                                               >  2:317954/1‑163 (MQ=255)                                                                                                                                                 cGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGc                                                                                                                                                                                                           <  1:317958/163‑1 (MQ=255)                                                                                                                                                            gTTCCTGCCACCAATTGACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGTCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTggg                                                                                 <  1:100124/274‑1 (MQ=255)                                                                                                                                                                        ggtGTACTGATTGTAGGCAGTATTGATACCGCGCGCGTTACGCTGACTGACCGTGGTGCCCGCATCGCCCGCGGGACATAAACCGGAACCGCGCAGCGTAACGCCGACGGCAGCGGGCAAGTGGAAATCCTGCGCATGGCGGATATACGTCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCTGTCGTTTCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCt                                                                    <  2:194033/273‑1 (MQ=255)                                                                                                                                                                                 aTTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGTCTACCAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGt                                                                                                                                               >  1:252398/1‑191 (MQ=255)                                                                                                                                                                                     aaGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGTCTACCAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCcg                                                                                                                                           <  2:252394/191‑1 (MQ=255)                                                                                                                                                                                      aGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCg                                                                                                                                                                                                          >  1:141443/1‑127 (MQ=255)                                                                                                                                                                                      aGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGTCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTTCAGACTGGTCTCCTGGAAGTGATCGATGCTCGt                                                                                                    >  2:472060/1‑229 (MQ=255)                                                                                                                                                                                          aGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACNTCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGTCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGAGCGCTTGGAAGTGATCGATGCTCGTTTGc                                                                                                <  1:472067/229‑1 (MQ=255)                                                                                                                                                                                          aGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGata                                                                                                                                                                                                      <  2:141442/127‑1 (MQ=255)                                                                                                                                                                                           gTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGTCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGt                                                                                                                                               >  2:11165/1‑181 (MQ=255)                                                                                                                                                                                            tATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGTCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGACGTGATCGAGGCTCGTTTGCAATGTCCGGACTGTACGTTGATCGCCCTCGATCTCAGCTTCCGAAACa                                                >  1:545085/1‑275 (MQ=255)                                                                                                                                                                                               tGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGTCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCcg                                                                                                                                           <  1:11166/181‑1 (MQ=255)                                                                                                                                                                                                   aaCGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGTCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGctct                                                                                                                                                 >  2:64989/1‑171 (MQ=255)                                                                                                                                                                                                      gATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGTCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCcg                                                                                                                                           >  2:849/1‑174 (MQ=255)                                                                                                                                                                                                      gATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGTCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGCAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGGCCTCGAGCTAAGGTTGCGCACCATGACCGTcc                                       >  2:148821/1‑273 (MQ=255)                                                                                                                                                                                                       aTCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGTCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTcc                                                                                                                                             <  1:64990/171‑1 (MQ=255)                                                                                                                                                                                                        tCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTgcg                                                                                                                                                                                                                 >  1:107907/1‑102 (MQ=255)                                                                                                                                                                                                          gcgTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGTCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCcgtcgt                                                                                                                                       <  1:849/174‑1 (MQ=255)                                                                                                                                                                                                            gTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATg                                                                                                                                                                                                             <  2:107906/102‑1 (MQ=255)                                                                                                                                                                                                                     aCTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCg                                                                                                                                                                                                          >  1:21128/1‑96 (MQ=255)                                                                                                                                                                                                                         aCCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGata                                                                                                                                                                                                      <  2:21127/96‑1 (MQ=255)                                                                                                                                                                                                                               gTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGcagcgtaacgcgatcgttatcaatactgccttcaatcagtacattgttggcaggaacatcattgagcgaaagcgatccg                                                                                                                                                                           <  1:460983‑M2/117‑80 (MQ=255)                                                                                                                                                                                                                               gTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGcagcgtaacgcgatcgttatcaatactgccttcaatcagtacattgttggcaggaacatcatt                                                                                                                                                                                           <  2:454942‑M2/101‑64 (MQ=255)                                                                                                                                                                                                                               gTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGcagcgtaacgc                                                                                                                                                                                                                                               <  1:592700‑M2/49‑12 (MQ=255)                                                                                                                                                                                                                               gTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGTCTACAAAGCGAAAAATCGCTAACCGAc                                                                                                                                                                      >  2:482247/1‑122 (MQ=255)                                                                                                                                                                                                                                   cGACATCGCCCGCGGGACATTAACCGGAAACGCGcagcgtaacgcgatcgttatcaatactgccttcaatcagtacattggtggcaggaacatcattgagcgaaagcgatccggcac                                                                                                                                                                       >  2:460977‑M2/1‑34 (MQ=255)                                                                                                                                                                                                                                   cGACATCGCCCGCGGGACATTAACCGGAAACGCGcagcgtaacgcgatcgttatcaatactgccttcaatcagtacattggtggcaggaacatcattgagc                                                                                                                                                                                       >  1:454947‑M2/1‑34 (MQ=255)                                                                                                                                                                                                                                   cGACATCGCCCGCGGGACATTAACCGGAAACGCGcagcgtaacgcgatc                                                                                                                                                                                                                                           >  2:592691‑M2/1‑34 (MQ=255)                                                                                                                                                                                                                                   cGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGTCTACAAAGCGAAAAATCGCTAACCGActtct                                                                                                                                                                  <  1:482254/122‑1 (MQ=255)                                                                                                                                                                                                                                         cGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTgcg                                                                                                                                                                                                                 >  1:140949/1‑69 (MQ=255)                                                                                                                                                                                                                                           cccGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGTCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACTCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGCCCCTCAGGAACGGTGACGTTCAGACACCGNAACGccttcctct  >  2:502895/1‑266 (MQ=255)                                                                                                                                                                                                                                             cgcgGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATg                                                                                                                                                                                                             <  2:140948/69‑1 (MQ=255)                                                                                                                                                                                                                                               cgGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGNCGGATATACGTCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGGTCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGa                     <  1:502902/251‑1 (MQ=255)                                                                                                                                                                                                                                                gggACATTAACCGGAAACGCGcagcgtaacgcgat                                                                                                                                                                                                                                            <  2:233299‑M2/35‑15 (MQ=255)                                                                                                                                                                                                                                                    cATTAACCGGAAACGCGcagcgtaacgcgatcgtt                                                                                                                                                                                                                                        >  1:233302‑M2/1‑17 (MQ=255)                                                                                                                                                                                                                                                               aaCGCGcagcgtaacgcgatcgttatcaatactgccttcaatcagtacattggtggcaggaacatcattgagcgaaagcgatccg                                                                                                                                                                           <  1:234322‑M2/85‑80 (MQ=255)                                                                                                                                                                                                                                                               aaCGCGcagcgtaacgcgatcgttatcaatactgccttcaatcagtacattggtggcaggaacatcattgagcgaaagcgatccg                                                                                                                                                                           <  2:530763‑M2/85‑80 (MQ=255)                                                                                                                                                                                                                                                                  gcgcAGCGTACAGTCGACGGTAGCGTGTAAGTGGAATACCTGCGCATGGCGGATATACTTCTACAAAGCGAAAAATCGCTAACCAACTTCGTTGCGCCATTACGCTCTGTTCCGTCGTTGCAGATTGGTCGCCTGGAAGTGAGCGATTCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGaca                   <  1:562633/234‑1 (MQ=255)                                                                                                                                                                                                                                                                   cgcagcgtaacgcgatcgttatcaatactgccttcaatcagtacattggtggcaggaacatcattgagcgaaagcgatccggcac                                                                                                                                                                       >  1:530771‑M2/1‑2 (MQ=255)                                                                                                                                                                                                                                                                   cgcagcgtaacgcgatcgttatcaatactgccttcaatcagtacattggtggcaggaacatcattgagcgaaagcgatccggcac                                                                                                                                                                       >  2:234319‑M2/1‑2 (MQ=255)                                                                                                                                                                                                                                                                   cgcAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGTCTACAAAGCGaaaaa                                                                                                                                                                                  >  1:528150/1‑74 (MQ=255)                                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                         TGCGTGATATGGCGTTTAATAGCCCGAATAGCGAATGGAAACTGAGCGCGCAGCGGGTAAATGGCGGCGTAGTTCCGTGGTCACCAAAAGCCGGTAAAGTGCTGGGTACGAAGGCGCAGATTCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGTCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAAGGCAAACTGTC  >  CP009273/3824193‑3824700

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.