New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	4440863 =	47 (1.700)	4 (0.150)	3/262	NT	9.5%	intergenic (+128/‑12)	ytfQ/ytfR	galactofuranose binding proteint: periplasmic‑binding component of ABC superfamily/putative ABC superfamily sugar transporter ATP‑binding subunit
	?	CP009273	4440937 =	31 (1.170)					coding (63/1503 nt)	ytfR	putative ABC superfamily sugar transporter ATP‑binding subunit

AATATGGCAGGTCCCGCCTTCGACGCGCTGGAGAAATACAAAAAAGACGGCACCATGCCTGAAAAGCTGACGTTAACCAAATCCACCCTTTACCTGCCTGATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCAGGAGATCCTCCGCACCGAAGGATTAAGTAAATTTTTCCCCGGCGTCAAAGCGTTAGACAACGTTGATTTCAGCCTGCGCCGTGGCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCACCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCA  >  CP009273/4440589‑4441136                                                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                                                  aaTATGGCAGGTCCCGCCTTCGACGCGCTGGAGAAATACAAAAAAGACGGCACCATGCCTGAAAAGCTGACGTTAACCAAATNCACCCTTTNCCTGCCTGATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGTGTCTTATCATGCCTACTGGGAGCACGCTTTacac                                                                                                                                                                                                                                                                                   <  1:370610/275‑1 (MQ=255)           gTCCCGCCTTCGACGCGCTGGAGAAATACAAAAAAGACGGCACCATGCCTGAAAAGCTGACGTTAACCAAATCCACCCTTTACCTGCCTGATACCGCAAAAGAAGAATTAGAGAAGAAG‑AAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCCCTGAAACCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAAcc                                                                                                                                                                                                                                                                        >  1:158884/1‑275 (MQ=255)                        cgcgCTGGAGAAATACAAAAAAGACGTCGCCATGCCTGAAAAGCTTACTTTAACCAAATCCACCCTTTACCTGCCTGATACCGCAAAATAAGAATTAGAGAAGATGAAAAATATGGGTTATTGAGGGTTGCTATGCCTTATGCCGATTCGTATGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGAcgaccgac                                                                                                                                                                                                                                                            <  1:360265/275‑1 (MQ=255)                          cccTGGAAAAATAAAAAAAAGACGGCACCATGCCTGAAAAGTTAACGTTAACCAAATCCACCCTTTATCTGCCTGATACCGAAAAAGAAGAAATAGAGAAGAAG‑AAAAGATGGGGTATTGGGGGTTGCTATGCCTGATGCAGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCCTCCGGCGATGGTGCACTGAAGCCGGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACgaccgacc                                                                                                                                                                                                                                                           <  2:158883/271‑1 (MQ=255)                                                                             ccAAATCCACCCTTTACCTGCCTGATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCAGGAGATCCTCCGc                                                                                                                                                                                                                                       >  2:375554/1‑243 (MQ=255)                                                                                 aTCCACCCTTTACCTGCCTGATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCAGGAGATCCTCCGCACCg                                                                                                                                                                                                                                   <  1:375559/243‑1 (MQ=255)                                                                                                     aTACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGAcgaccga                                                                                                                                                                                                                                                             >  2:533938/1‑197 (MQ=255)                                                                                                         cGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCaa                                                                                                                                                                                                                                                         <  1:533946/197‑1 (MQ=255)                                                                                                                                                     ggTTGCGATGCCTGATGCCGAGTAGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACGGAAGCCTGATGCGACGCGTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCAGGAGATCCTCCGCACCGAAGGATTAAGTAAATTTTTCCCCGGCGTCAAAGCGTTAGACa                                                                                                                                                                                         <  1:128526/217‑1 (MQ=255)                                                                                                                                                        tGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATga                                                                                                                                                                                                                                                                    >  2:349843/1‑139 (MQ=255)                                                                                                                                                        tGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCAGGAGATCCTCCGCACCGaa                                                                                                                                                                                                                                 >  1:308542/1‑174 (MQ=255)                                                                                                                                                            aTGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATgacgac                                                                                                                                                                                                                                                                <  1:349848/139‑1 (MQ=255)                                                                                                                                                            aTGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCAGGAGATCCTCCGCACCGAAGGAt                                                                                                                                                                                                                             <  2:308538/174‑1 (MQ=255)                                                                                                                                                               ccTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCAGGAGATCCTCCGCACCGAAGGa                                                                                                                                                                                                                              >  1:99961/1‑170 (MQ=255)                                                                                                                                                                   aTGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCAGGAGATCCTCCGCACCGAAGGATTaa                                                                                                                                                                                                                          <  2:99961/170‑1 (MQ=255)                                                                                                                                                                   aTGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCAGGAGATCCTCCGCACCGAAGGATTAAGTAAATTTTTCCCCGGCGTCAAAGCGTTAGACAACGTTGATTTCAGCCTGCGCCGTGGCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAAGCAAcac                                                                                                                 >  1:202208/1‑273 (MQ=255)                                                                                                                                                                     gCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGAcgaccg                                                                                                                                                                                                                                                              >  2:47524/1‑132 (MQ=255)                                                                                                                                                                      accagttaatgctttgattagcgttgattttcccgccccgttttcaccgagcagcgccatgatttcgccacggcgcaggctgaaatcaacgttgtctaacgctttgacgcc                                                                                                                                                                                                                                                                                  <  2:99372‑M1/2‑1 (MQ=255)                                                                                                                                                                         aTTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCa                                                                                                                                                                                                                                                          <  1:47524/132‑1 (MQ=255)                                                                                                                                                                         aTTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCAGGAGATCCCCCGCACCGAAGGATGAAGTAAATTTTTCCCCGGc                                                                                                                                                                                                         >  1:266895/1‑181 (MQ=255)                                                                                                                                                                          gttaatgctttgattagcgttgattttcccgccccgttttcaccgagcagcgccatgatttcgccacggcgcaggctgaaatcaacgttgtctaacgctttgacgCCgggg                                                                                                                                                                                                                                                                              >  1:99372‑M1/106‑111 (MQ=255)                                                                                                                                                                           ttaatgctttgattagcgttgattttcctgccccgttttcaccgagcagcgccatgatttcgccacggcgcaggctgaaatcaacgttgtctaacgctttgacgCCGGGGGAAACCATGACGACCGACCAACACCAGGAGATCCTCCGCACCGaa                                                                                                                                                                                                                                 <  1:422175‑M1/51‑1 (MQ=255)                                                                                                                                                                               tgctttgattagcgttgattttcccgccccgttttcaccgagcagcgccatgatttcgccacggcgcaggctgaaatcaacgttgtctaacgctttgacgCCGGGGGAAACCATGACGACCGACCAACACCAGGAGATCCTCCGCACCGAAGGAt                                                                                                                                                                                                                             >  2:422168‑M1/101‑155 (MQ=255)                                                                                                                                                                                   cggatcgtgcgcTCGCGCCGCATCCGGCGATGGTGCACTGAAGGATGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCAGGAGATCCTCCGCACCGAAGGATTAAGTAAATTGTTCGCCGGCGTCAAAGCGTTAGACAACGTTGATTTCAGGCTGCGCCGTGGCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAAc                                                                                                 <  1:272168/267‑1 (MQ=255)                                                                                                                                                                                     gATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCAGGAGATCCTCCGc                                                                                                                                                                                                                                       >  2:83872/1‑139 (MQ=255)                                                                                                                                                                                         aGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCAGGAGATCCTCCGCACCg                                                                                                                                                                                                                                   <  1:83872/139‑1 (MQ=255)                                                                                                                                                                                               tCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCAGGAGATCCTCCGCACCGAAGGa                                                                                                                                                                                                                              >  2:76848/1‑138 (MQ=255)                                                                                                                                                                                                   gccgcATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCAGGAGATCCTCCGCACCGAAGGATTaa                                                                                                                                                                                                                          <  1:76848/138‑1 (MQ=255)                                                                                                                                                                                                          cccgttttcaccgagcagcgccatgatctcgccacggcgcaggctgaaatcaacgttgtctaacgctttgacgCCGGGGGAAACCATGACGACCGACCAACACCAGGAGATCCTCCGCACCGaa                                                                                                                                                                                                                                 <  1:343167‑M1/51‑1 (MQ=255)                                                                                                                                                                                                              ttttcaccgagcagcgccatgatttcgccacggcgcaggctgaaatcaacgttgtctaacgctttgacgCCGGGGGAAACCATGACGACCGACCAACACCAGGAGATCCTCCGCACCGAAGGAt                                                                                                                                                                                                                             >  2:343162‑M1/70‑124 (MQ=255)                                                                                                                                                                                                                        cTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCAGGAGNTCCTCCGCACTGAAGGATTAAGTAAATTTTTCCCCGGCGTCAAAGCGTTAGACAACGTTGATTTCAGCCTGCGCCGTGGCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGcc                                                                                 <  1:520328/254‑1 (MQ=255)                                                                                                                                                                                                                           aaGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATgacgac                                                                                                                                                                                                                                                                >  2:46187/1‑76 (MQ=255)                                                                                                                                                                                                                           aaGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCAGGAGATCCTCCGCACCGAAGGATTAAGTAAATTTTTCCCCg                                                                                                                                                                                                           >  2:465096/1‑129 (MQ=255)                                                                                                                                                                                                                               cTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGAcgaccgac                                                                                                                                                                                                                                                            <  1:46187/76‑1 (MQ=255)                                                                                                                                                                                                                               cTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCAGGAGATCCTCCGCACCGAAGGATTAAGTAAATTTTTCCCCGGCGt                                                                                                                                                                                                       <  1:465103/129‑1 (MQ=255)                                                                                                                                                                                                                                  aTGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCAGGAGATCCTCCGCACCGAAGGATTAAGTAAATTTTTCCCCGGCGTCAAAGCGTTAGACAACGTTGATTTCAGCCTGCGCCGTGGCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATcg                                                                            >  1:92132/1‑249 (MQ=255)                                                                                                                                                                                                                                       aCGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCAGGAGATCCTCCGCACCGAAGGATTAAGTAAATTTTTCCCCGGCGTCAAAGCGTTAGACAACGTTGATTTCAGCCTGCGCCGTGGCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCa                                                                                                      >  1:66536/1‑218 (MQ=255)                                                                                                                                                                                                                                            tACAGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCAGGAGATCCTCCGCACCGAAGGATTAAGTAAATTTTTCCCCGGCGTCAAAGCGTTAGACAACGTTGATTTCAACCTGCGCCGTGGCGAAATCa                                                                                                                                                        <  1:441252/163‑1 (MQ=255)                                                                                                                                                                                                                                                 cgTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCAGGAGATCCTCCGCACCGAAGGATTAAGTAAATTTTTCCCCGGCGTCAAAGCGTTAGACAACGTTGATTTCAGCCTGCGCCGTGGCGAAATCATGGCGCTGCTCGTTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTaa                                                                                                  >  2:470881/1‑212 (MQ=255)                                                                                                                                                                                                                                                 cgTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCACGAGATCCTCCGCACCGAAGGATTAAGTAAATTTTTCCCCGGCGTCAAAGCGTTAGACAACGTTGATTTCAGCCTGCGCCGTGGCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTaa                                                                                                  <  1:470888/212‑1 (MQ=255)                                                                                                                                                                                                                                                   tCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCAGGAGATCCTCCGCACCGAAGGATTAAGTAAATTTTTCCCCGGc                                                                                                                                                                                                         >  1:132000/1‑107 (MQ=255)                                                                                                                                                                                                                                                       aTCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCAGGAGATCCTCCGCACCGAAGGATTAAGTAAATTTTTCCCCGGCGTCa                                                                                                                                                                                                     <  2:131999/107‑1 (MQ=255)                                                                                                                                                                                                                                                             ccTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCa                                                                                                                                                                                                                                                    >  2:81772/1‑54 (MQ=255)                                                                                                                                                                                                                                                             ccTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCAGGAGATCCTCCGCACCGAAGGATTAAGTAAATTTTTCCCCGGCGTCAAAGCGTTAGACAACGTTGATTTCAGCCTGCGCCGTGGCGAAATCAt                                                                                                                                                       >  2:190837/1‑147 (MQ=255)                                                                                                                                                                                                                                                                 cTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCAGgag                                                                                                                                                                                                                                                <  1:81772/54‑1 (MQ=255)                                                                                                                                                                                                                                                                 cTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCAGGAGATCCTCCGCACCGAAGGATTAAGTAAATTTTTCCCCGGCGTCAAAGCGTTAGACAACGTTGATTTCAGCCTGCGCCGTGGCGAAATCATGgcg                                                                                                                                                   <  1:190839/147‑1 (MQ=255)                                                                                                                                                                                                                                                                    ggAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCAGGAGATCCTCCGCACCGAAGGATTAAGTAAATTTTTCCCCGGCGTCAAAGCGTTAGACa                                                                                                                                                                                         >  2:371446/1‑106 (MQ=255)                                                                                                                                                                                                                                                                      aGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCCGGAGATCCTCCGCACCGAAGGATTAAGTAAATTTTTCAACGGCGTCAAAGCCTTAGACCACGTTGATTTCAGCCTGCTCCGTTGCGAACTAATGGCGCTGCTCGGTGAAAACGGGGCGGGAACATCCACGCTAATCACAGCATTCACTGGTGTCTACCAAGACGAACGCGGCAACATCTGGCTGGAAGACCAGTAGCTCTCCCCGAAACCTACCGCCCACGCGccacca               >  2:190975/1‑272 (MQ=255)                                                                                                                                                                                                                                                                      aGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCAGGAGATCCTCCGCACCGAAGGATTAAGTAAATTTTTCCCCGGc                                                                                                                                                                                                         >  1:114343/1‑88 (MQ=255)                                                                                                                                                                                                                                                                      aGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCAGGAGATCCTCCGCACCGAAGGATTAAGTAAATTTTTCCCCGGCGTCAAAGCGTTAGACAACGtt                                                                                                                                                                                    >  1:86831/1‑109 (MQ=255)                                                                                                                                                                                                                                                                      aGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCAGGAGATCCTCCGCACCGAAGGATTAAGTAAATTTTTCCCCGGCGTCAAAGCGTTAGACAACGTTGATTTCAGCCTGCGCCGTGGCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCAACTGGCTGGAAGGACAGGCTATCTCACCGAAAAATACCGCCCACGCGCaacaac              >  1:352873/1‑275 (MQ=255)                                                                                                                                                                                                                                                                        cACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCAGGAGATCCTCCGCACCGAAGGATTAAGTAAATTTTTCCCCGGCGTCAAAGCGTTAGACAACGt                                                                                                                                                                                     <  1:371451/106‑1 (MQ=255)                                                                                                                                                                                                                                                                          cGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCAGGAGATCCTCCGCACCGAAGGATTAAGTAAATTTTTCCCCGGCGTCa                                                                                                                                                                                                     <  2:114343/88‑1 (MQ=255)                                                                                                                                                                                                                                                                          cGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCAGGAGATCCTCCGCACCGAAGGATTAAGTAAATTTTTCCCCGGCGTCAAAGCGTTAGACAACGTTGAtt                                                                                                                                                                                <  2:86831/109‑1 (MQ=255)                                                                                                                                                                                                                                                                                acacCGGGGGAAACCATGACGACCGACCAACACCAGGAGAtcc                                                                                                                                                                                                                                            >  2:54981/1‑43 (MQ=255)                                                                                                                                                                                                                                                                                   CCGCGGGAAACCCGCACGACCGACCAACACCAGGAGCTCCTCCGCATCGAAGGATTAAGTAAATTTTTCCCCGGCGTCAAAGCGTTAGACAACGTTGATTTCAGCCTGCGCCGTGGCGAAATCAGGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCACCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCa  >  2:202206‑M1/1‑274 (MQ=255)                                                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                                                  AATATGGCAGGTCCCGCCTTCGACGCGCTGGAGAAATACAAAAAAGACGGCACCATGCCTGAAAAGCTGACGTTAACCAAATCCACCCTTTACCTGCCTGATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCAGGAGATCCTCCGCACCGAAGGATTAAGTAAATTTTTCCCCGGCGTCAAAGCGTTAGACAACGTTGATTTCAGCCTGCGCCGTGGCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCACCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCA  >  CP009273/4440589‑4441136

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.