New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 2164908	NA (NA)	12 (0.440)	11/272	NT	28.7%	intergenic (+29/+2)	insF1/gatR	IS3 transposase B/pseudogene, repressor for gat operon; interrupted by IS3; split galactitol utilization operon repressor, fragment 2; split galactitol utilization operon repressor, interrupted
	?	CP009273	4283864 =	30 (1.090)					coding (394/597 nt)	nrfG	heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfG

ATCCGCTACATCAGTTTGCCAGCCAGCAAACCCCGGAAGCGCAGCTTCAGGCATTGCAGGATAAAATCCGCGCTAATCCACAAAACAGCGAACAGTGGGCGTTACTGGGCGAGTACTATCTGTGGCAAAACGATTACAGCAATTCGTTGCTGGCGTACCGTCAGGCGTTGCAACTACGTGGTGAGAACGCTGAACTGTATGCGGCGCTGGCGACGGTGCTTTATTACCAGGCCAGCCAGCATATGACCGCCCAGACTCGCGCAATGATCGACAAAGCCCTCGCGCTGGACAGTAATGAAATCACCGCCCTGATGCTGCTGGCTTCCGATGCGTTTATGCAGGCGAACTACGCGCAAGCCATCGAACTATGGCAAAAAGTGATGGATCTCAACTCACCGCGAGTTAACCGAACACAGCTGGTTGAGTCGATTAATATGGCGAAATTGTTGCAGCGGAGATTGGATTAATCATCTGGTGATGAAGATTATGTCATTGAGCTGCATAAAAAATAATCGAATGAACATATGCCAAAAA  >  CP009273/4283601‑4284134                                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                               aTCCGCTACATCAGTTTGCCAGCCAGCAAACCCCGGAAGCGCAGCTTCAGGCATTGCAGGATAAAATCCGCGCTAATCCACAAAACAGCGAACAGTGGGCGTTACTGGGCGAGTACTATCTGTGGCAAAACGATTACAGCAATTCGTTGCTGGCGTACCGTCAGGCGTTGCAACTACGTGGTGAGAACGCTGAACTGTATGCGGCGCTGGCGACGGTGCTTTATTACCAGGCCAGCCAGCATATGACCGCCCAGACTCGCGCAATGATCGACaaa                                                                                                                                                                                                                                                                     >  1:222044/1‑275 (MQ=255)               gtgtcaagcnagcAAACCCCGACAGCGCAGCTTCAGGCGTTGCAGGATAAACTCCGCGCTAATCCACAAAACAGCGAACCGTGGGCGTTACTGGGCGAGTACTATCTGTAGCAAAACGATTACAGCAATTCGTTGCGGGCGTACCGTCAGGCGTTGCAACTACGTGGTGAGAACGCTGAACTGTATGCGGCGCTGGCGACGTTGCTTTCTTACCAGGCCAGCCAGCATATGACCGCCCAGACTCGCGCAATGATCGACAAGGCCCTCGCGCTGGa                                                                                                                                                                                                                                                       <  2:222042/269‑1 (MQ=255)                 tGCCAGCCAGCAAACCCCGGAAGCGGAGCTTCAGGCATTGCAGGATAAAATCCGCGCTAATCCACAAAACAGCGAACAGTGGGCGTTACTGGGCGAGTACTATCTGTGGCAAAACGATTACAGCAATTCGTTGCTGGCGTACCGTCAGGCGTTGCAACTACGTGGTGAGAACGCTGAACTGTATGCGGCGCTGGCGACGGTGCTTTATTACCAGGCCAGCCAGCATATGACCGCCCAGACTCGCGCAATGATCGACAAAGCCCTCGCGCTGGACa                                                                                                                                                                                                                                                     <  1:245443/275‑1 (MQ=255)                                                       gtagggAGAAAATCCGCGCTAATCCACCAAACAGCGAACAGTGGGCGTTACTGGGCGAGTACTATCTGTGGCAAAACGATTACAGCAATTCGTTGCTGGCGTACCGTCAGGCGTTGCAACTACGTGGTGAGAACGCTGAACTGTATGCGGCGCTGGCGACGGTGCTTTATTACCAGGCCAGCCAGCATATGACCGCCCAGACTCGCGCAATGATCGACAAAGCCCTCGCGCTGGACAGTAATGAAATCACCGCCCTGATGCTGCTGGCTTCCGa                                                                                                                                                                                                                <  2:134914/270‑1 (MQ=255)                                                        gCAGGATAAAATCCGCGCTAATCCACAAAACAGCGAACAGTGGGCGTTACTGGGCGAGTACTATCTGTGGCAAAACGATTACAGCAATTCGTTGCTGGCGTACCGTCAGGCGTTGCAACTACGTGGTGAGAACGCTGAACTGTATGCGGCGCTGGCGACGGTGCTTTATTACCAGGCCAGCCAGCATATGACCGCCCAGACTCGCGCAATGATCGACAAAGCCCt                                                                                                                                                                                                                                                                >  1:197318/1‑225 (MQ=255)                                                            gATAAAATCCGCGCTAATCCACAAAACAGCGAACAGTGGGCGTTACTGGGCGAGTACTATCTGTGGCAAAACGATTACAGCAATTCGTTGCTGGCGTACCGTCAGGCGTTGCAACTACGTGGTGAGAACGCTGAACTGTATGCGGCGCTGGCGACGGTGCTTTATTACCAGGCCAGCCAGCATATGACCGCCCAGACTCGCGCAATGATCGACAAAGCCCTcgcg                                                                                                                                                                                                                                                            <  2:197316/225‑1 (MQ=255)                                                                                 aaaaaCACCGACGAGTGGGGTGTATTGGGCGTGTACTATCTGGTGCAAAACGTTGATCGCAATTCTTTGCTTTCGTACCGTCAGGCGTTGAAACTACGTGGGGAGAGAGCGGAACTGGATACGGTGCGGTGTGTGTTGCTTTATGACCAGGCCAGCCAGCATATGACCGCCCAGACTCGCGCGATGATCGACAAAGCCCTCGCGCTGGACAGTAATGAAATCACCGCCCTGATGCTGCTGTCTTCCGATGCGTTTATGCAGGCGAACTACGCGCa                                                                                                                                                                                     <  2:564176/274‑1 (MQ=255)                                                                                      cAGCGAACAGTGGGCGTTACTGGGCGAGTACTATCTGTGGCACAACGATTACAGCAATTCGTTGCTGGCGTACCGTCAGGCGTTGCAACTACGTGGTGAGAACGCTGAACTGTATGCGGCGCTGGCGACGGTGCTTTATTACCAGGCCAGCCAGCATATGACCGCCCAGACTCGCGCAATGa                                                                                                                                                                                                                                                                             <  1:482481/182‑1 (MQ=255)                                                                                             ccatggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcATGATCGACAAAGCCCTCGCGCTGGACAGTAATGAAATCACCGCCCTGAtgc                                                                                                                                                                                                                             >  2:66026‑M2/172‑223 (MQ=255)                                                                                                tGGGCGTTACTGGGCGAGTACTATCTGTGGCAAAACGATTACAGCAATTCGTTGCTGGCGTACCGTCAGGCGTTGCAACTACGTGGTGAGAACGCTGAACTGTATGCGGCGCTGGCGACGGTGCTTTATTACCAGGCCAGCCAGCATATGACCGCCCAGACTCGCGCAATGATCGACGAAGCCCTCGCGCTGGACAGTAATGAAATCACCGCCCTGATGCTGCTGGCTTCCGATGCGTTTATGCAGGCGAACTACGCGCAAGCCATCGAACTATg                                                                                                                                                                      >  1:321268/1‑275 (MQ=255)                                                                                                 ggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcATGATCGACAAAGCCCTCGCGCTGGACAGTAATGAAATCACCGCCCTGATgctgct                                                                                                                                                                                                                         <  1:66026‑M2/56‑1 (MQ=255)                                                                                                             gCGAGTACTATCTGTGGCAAAACGATTACAGCAATTCGTTGCTGGCGTACCGTCAGGCGTTGCAACTACGTGGTGAGAACGCTGAACTGTATGCGGCGCTGGCGACGGTGCTTTATTACCAGGCCAGCCAGCATATGACCGCCCAGACTCGCGCAATGATCGACAAAGCCCTCGCGCTGGACAGTAATGAAATCACCGCCCTGATGCTGCTGGCTTCCGATGCGTTTATGCAGGCGAACTACGCGCAAGCCATCGAACTATGGCAAAAAGTGATg                                                                                                                                                         <  1:339690/275‑1 (MQ=255)                                                                                                                aGTACTATCTGTGGCAAAACGATTACAGCAATTCGTTGCTGGCGTACCGTCAGGCGTTGCAACTACGTGGTGAGAACGCTGAACTGTATGCGGCGCTGGCGACGGTGCTTTATTACCAGGCCAGCCAGCATATGACCGCCCAGACTCGCGCAATg                                                                                                                                                                                                                                                                              <  1:326214/155‑1 (MQ=255)                                                                                                                           tgGCAAAACGATTACAGCAATTCGTTGCTGGCGTACCGTCAGGCGTTGCAACTACGTGGTGAGAACGCTGAACTGTATGCGGCGCTGGCGACGGTGCTTTATTACCAGGCCAGCCAGCATATGACCGCCCAGACTCGCGCAATGATCGACAACGCCCTCGCGCTGGACAGTAATGAAATCACCGCCCTGATGCTGATGGCTTCCGATGCGTTTATGCAGGCGAACTACGCGCAAGCCATCGAACTATGGCAAAAAATGATGAATCCAAACTCAcc                                                                                                                                           >  1:537273/1‑275 (MQ=255)                                                                                                                            ggCAAAACGATTACAGCAATTCGTTGCTGGCGTACCGTCAGGCGTTGCAACTACGTGGTGAGAACGCTGAACTGTATGCGGCGCTGGCGACGGTGCTTTATTACCAGGCCAGCCAGCATATGACCGCCCAGACTCGCGCAATGCTCGACAAAGCCCTCGCGCTGGACAGTAATGAAATCACCGCCCTGATGCTGCTGGCTTCCGATGCGATGATGAAGGCGAACTACGCGCAAGCCATCGAACTATGTCAAAAAGTGATGGAGCGCAACTCAcc                                                                                                                                           >  2:125949/1‑274 (MQ=255)                                                                                                                            ggCAAAACGATTACAGCAATTCGTTGCTGGCGTACCGTCAGGCGTTGCAACTACGTGGTGAGAACGCTGAACTGTATGCGGCGCTGGCGACGGTGCTTTATTACCAGGCCAGCCAGCATATGACCGCCCAGACTCGCGCAATGATCGACAAAGCCCTCGCGCTGGACAGTAATGACATCACCGCCCTGATGCTGCTGGCTTCCGATGCGTTTATGCAGGCGAACTACGCGCAAGCCAAGGAACAACGGCAAAAAGCAATGGAACTAAACTCaa                                                                                                                                            >  2:259976/1‑272 (MQ=255)                                                                                                                                 aaCGATTACAGCAATTCGTTGCTGGCGTACCGTCAGGCGTTGCAACTACGTGGTGAGAACGCTGAACTGTATGCGGCGCTGGCGACGGTGCTTTATTCCCAGGCCAGCCAGCATATGACCGCCCAGACTCGCGCAATGATCGACAAAGCTCTCGCGCTGGACAGTAATGAAATCACCTCCCTGAtcc                                                                                                                                                                                                                             >  1:319461/1‑185 (MQ=255)                                                                                                                                 aaCGATTACAGCAATTCGTTGCTGGCGTACCGTCAGGCGTTGCAACTACGTGGTGAGAACGCTGAACTGTATGCGGCGCTGGCGACGGTGCTTTATTACCAGGCCAGCCAGCATATGACCGCCCAGACTCGCGCAATGATCGACAAAACCCTCGCGCTNGACAGTAATGAAATCACCGCCCTGATGCTGCTGGCTTCCGATGCGTTTATGCAGGCGAACTACGCGCAAGCCATCGAACTATGGCAAAAAGTGATGGATCTCAACTCACAGCGAGt                                                                                                                                     >  1:516064/1‑275 (MQ=255)                                                                                                                                          gttgagtgatatcgaatgtgattaaaattggtggaggtgtcaaaggtggggtggcggcctcagtccggaacaatttgaaaacnagaacctcncttaggcctgttgccatattacgtgggtaggatcATGATCGACAAAGCCCTCGCGCTGGACAGTAATGAAATCACCGCCCTGATGCTGCTGGCTTCCGATGCGTTTATGCAGGCGAACTACGCGCAAGCCATCGAACTATGGCAAAAATTGATGGAGCTCAACTCACCGCGAGTTAACCGAac                                                                                                                            <  1:386354‑M2/149‑1 (MQ=255)                                                                                                                                              aTTCCTTGCGGGCGTCCCGGCAGGCGTTGCAACTACGTGGTGGGAATGCTGAACTGTATGCGGGCCTGGGAACGGTGCTTTATTACCAGGCCAGCCAGCATATGACCGCCCAGACTCGCGCAATGATCGACAAAGCCCTCGCGCTGGACAGTAATGAAATCACCGCCCTGATGCTGCTGGCTTCCGATGCGTTTATGCAGGCGAACTACGCGCAAGCCATCGAACTATGGCAAAAAGTGATGGATCTCAACTCACCGCGAGTTAACCGAACACAg                                                                                                                        <  2:537265/275‑1 (MQ=255)                                                                                                                                                   tatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatca                                                                                                                                                                                                                                                                                >  2:493455‑M2/118‑118 (MQ=255)                                                                                                                                                   tatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcATGATCGACAAAGCCCTCGCGCTGGACAGTAATGAAATc                                                                                                                                                                                                                                          >  2:152891‑M2/118‑156 (MQ=255)                                                                                                                                                    tGCTGGCGTACCGTCAGGCGTTGCAACTACGTGGTGAGAACGCTGAACTGTATGCGGCGCTGGCGACGGTGCTTTATTACCAGGCCAGCCAGCATATGACCGCCCAGACTCGCGCAATGATCGACAAAGCCCTCGCGCTGGACAGTAATGAAATCACCGCCCTGATGCTGCTGGCTTCCGATGCGTTTATGCAGGCGAACTACGCGCAAGCCATCGAACTACGGCAAAAAGTGATGGAACTCAACTCACCTCGCGTTAACNGAAcccatcctgtc                                                                                                                  >  2:425209/1‑268 (MQ=255)                                                                                                                                                       gaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcATGATCGACAAAGCCCTCGCGCTGGACAGTAATGAAATCACCg                                                                                                                                                                                                                                      <  1:152892‑M2/43‑1 (MQ=255)                                                                                                                                                        ggCGTACCGTCAGGCGTTGCAACTACGTGGTGAGAACGCTGAACTGTATGCGGCGCTGGCGACGGTGCTTTNTTACCAGGCCAGCCAGCATATGACCGCCCAGACTCGCGCAATGATCGACAAAGCCCTCGCGCTGGACAGTAATGAAATCACCGCCCTGATGCTGCTGGCTTCCGATGCGTTTATGCAGGCGAACTACGCGCAAGCCATCGAACTATGGCAAAAAGTGATGGATCTCAACTCACCGCGAGTTaa                                                                                                                                  <  1:425216/255‑1 (MQ=255)                                                                                                                                                          tgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcATGATCGACAAAGCCCTCGCGCTGGACAGTAATGAAATCACCTCCCTGATGCTGCTGGCTTCCGATGCGTTTATTCAGGCAAACTACGCGCAATCCATCGAACTCTGGCAAACAGTGATGGATCTCAACTCACCGCGAGTTAACCAAACACAGCAGGTTGAGTCg                                                                                                            >  1:528711‑M2/111‑275 (MQ=255)                                                                                                                                                                                                        tGCGGCGCTGGCGACGGTGCTTTATTACCAGGCCAGCCAGCATATGACCGCCCAGACTCGCGCAATGATCGACAAAGCCCTCGCGCTGGACAGTAATGAAATCACCGCCCTGATGCTGCTGGCTTCCGATGCGTTTATGCAGGCGAACTACGCGCAAGCCATCGAACTATGGCAAAAAGTGATGGATCTCAACTCACCGCGAGTTAACCGAac                                                                                                                            >  1:185723/1‑213 (MQ=255)                                                                                                                                                                                                           ggcgCTGGCGACGGTGCTTTATTACCAGGCCAGCCAGCATATGACCGCCCAGACTCGCGCAATGATCGACAAAGcc                                                                                                                                                                                                                                                                  >  2:50014/1‑76 (MQ=255)                                                                                                                                                                                                            gcgcTGGCGACGGTGCTTTATTACCAGGCCAGCCAGCATATGACCGACCAGACTCGCGCAATGATCGACAAAGCCCTCGCGCTGGACAGTAATGAAATCACCGCCCTGATGCTGCTGGCTTCCGATGCGTTTATGCAGGCGAACTACGCGCAAGCCATCGAACTATGGCAAAAAGTGATGGATCTCAACTCACCGCGAGTTAACCGAACACAg                                                                                                                        <  2:185722/213‑1 (MQ=255)                                                                                                                                                                                                              aacaatttgaaaacaagaagctcgcttaggcctgtgtccatattacgtgggtaggatca                                                                                                                                                                                                                                                                                >  1:460889‑M2/59‑59 (MQ=255)                                                                                                                                                                                                               cTGGCGACGGTGCTTTATTACCAGGCCAGCCAGCATATGACCGCCCAGACTCGCGCAATGATCGACAAAGCCCTcg                                                                                                                                                                                                                                                              <  1:50014/76‑1 (MQ=255)                                                                                                                                                                                                                   tttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcATGATCGACAAAGCCCTCGCGCTGGACAGTAATGAAATCACCGCCCTGATGCTGCTGGCTTCCGATGCGTTTATGCAGGCGAACTACGCGCAAGCCATCGAACTATGGCAAAAAGt                                                                                                                                                             >  2:38585‑M2/54‑169 (MQ=255)                                                                                                                                                                                                                       ggTGCTTTATTACCAGGCCAGCCAGCATATGACCGCCCAGACTCGCGCAATGATCGACAAAGCCCt                                                                                                                                                                                                                                                                >  2:276131/1‑66 (MQ=255)                                                                                                                                                                                                                       aaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcATGATCGACAAAGCCCTCGCGCTGGACAGTAATGAAATCACCGCCCTGATGCTGCTGGCTTCCGATGCGTTTATGCAGGCGAACTACGCGCAAGCCATCGAACTATGGCAAAAAGTGATg                                                                                                                                                         <  1:38585‑M2/120‑1 (MQ=255)                                                                                                                                                                                                                           cTTTATTACCAGGCCAGCCAGCATATGACCGCCCAGACTCGCGCAATGATCGACAAAGCCCTcgcg                                                                                                                                                                                                                                                            <  1:276133/66‑1 (MQ=255)                                                                                                                                                                                                                                 tcccAGGCCCGCCAGCCTATGACCCCCCAGCCTCGCGCAATGATCTACAAAGCCCTCGCGCTGGACAGTAATGAAATCACCGCCCTGATGCTGCTGGCTTCCGATGCGTTTATGCAGGCGAACTACGCGCAAGCCATCGAACTATGGCAAAAAGTGATGGATCTCAACTCACCGCGAGTTAACCGAACACAGCTGGTTGAGTCGATTAATATGGCGAAATTGTTGCAGCGGAGATTGGATTAATCATCTGGTGATGAAGATTATGTCATTGAGc                                      <  2:516056/272‑1 (MQ=255)                                                                                                                                                                                                                                       gccagccaGCATATGACCGCCCAGACTCGCGCAATGATCGACAAAGCCCTCgcgc                                                                                                                                                                                                                                                           >  2:293386/1‑55 (MQ=255)                                                                                                                                                                                                                                          agccagcATATGACCGCCCAGACTCGCGCAATGATCGACAAAGCCCTCGCGCTGGACAGTAATGAAATCACCGCCCTGATGCTGCTGGCTTCCGATGCGTTTATGCAGGCGAACTACGCGCAAGCCATCGAACTATGGCAAAAAGTGATGGATCTCAACTCACCGCGAGTTAAc                                                                                                                                 >  2:558298/1‑174 (MQ=255)                                                                                                                                                                                                                                           gccagcATATGACCGCCCAGACTCGCGCAATGATCGACAAAGCCCTCGCGCTGGa                                                                                                                                                                                                                                                       <  1:293390/55‑1 (MQ=255)                                                                                                                                                                                                                                              agcATATGACCGCCCAGACTCGCGCAATGATCGACAAAGCCCTCGCGCTGGACAGTAATGAAATCACCGCCCTGATGCTGCTGGCTTCCGATGCGTTTATGCAGGCGAACTACGCGCAAGCCATCGAACTATGGCAAAAAGTGATGGATCTCAACTCACCGCGAGTTAACCGaa                                                                                                                             <  1:558306/174‑1 (MQ=255)                                                                                                                                                                                                                                                        cGCCCAGACTCGCGCAATGATCGACAAAGCCCTCGCGCTGGACAGTAATGaaa                                                                                                                                                                                                                                            >  2:550289/1‑53 (MQ=255)                                                                                                                                                                                                                                                          acgtgggtaggatcATGATCGACAAAGCCCTCGCGCTGGACAGTAATGAAATCACCGCCCTGAtgc                                                                                                                                                                                                                             >  1:230548‑M2/15‑66 (MQ=255)                                                                                                                                                                                                                                                            gtgggtaggatcATGATCGACAAAGCCCTCGCGCTGGACAGTAATGAAATCACCGCCCTGATGCTGCTGGCTTCCGATGCGTTTATGCAGGCGAACTACGCGCAAGCCATCGAACTATGGCAAAAAg                                                                                                                                                              >  2:206520‑M2/13‑127 (MQ=255)                                                                                                                                                                                                                                                            cAGACTCGCGCAATGATCGACAAAGCCCTCGCGCTGGACAGTAATGAAATCAc                                                                                                                                                                                                                                        <  1:550297/53‑1 (MQ=255)                                                                                                                                                                                                                                                              gggtaggatcATGATCGACAAAGCCCTCGCGCTGGACAGTAATGAAATCACCGCCCTGATgctgct                                                                                                                                                                                                                         <  2:230546‑M2/56‑1 (MQ=255)                                                                                                                                                                                                                                                                gtaggatcATGATCGACAAAGCCCTCGCGCTGGACAGTAATGAAATCACCGCCCTGATGCTGCTGGCTTCCGATGCGTTTATGCAGGCGAACTACGCGCAAGCCATCGAACTATGGCAAAAAGTGAt                                                                                                                                                          <  1:206522‑M2/119‑1 (MQ=255)                                                                                                                                                                                                                                                                    cgcAATGATCGACAAAGCCCTCGCGCTGGACAGTAATGAAATCACCGCCCTGATGCTGCTGGCtt                                                                                                                                                                                                                    >  1:507848/1‑65 (MQ=255)                                                                                                                                                                                                                                                                     atcATGATCGACAAAGCCCTCGCGCTGGACAGTAATGAAATCACCGCCCTGATGCTGCTGGCTTCCGATGCGTTTATGCAGGCGAACTACGCGCAAGCCATCGAACTATGGCAAAAAGTGATGGCTCTCAACTCACCGCGAGTTAACCGAACACAGCTGGTTGAGTCGATTAATATGGCGAAATTGTTGCCGCGGAGATTGGATTAATCATCTGGTGATGAAGATTATGTCCTTGAGCGGCGTAAAACACAATCGAATTACATTATTCCaaaaa  >  2:281644‑M2/4‑274 (MQ=255)                                                                                                                                                                                                                                                                        ATGATCGACAAAGCCCTCGCGCTGGACAGTAATGAAATCACCGCCCTGATGCTGCTGGCTTCCGa                                                                                                                                                                                                                <  2:507841‑M2/65‑1 (MQ=255)                                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                               ATCCGCTACATCAGTTTGCCAGCCAGCAAACCCCGGAAGCGCAGCTTCAGGCATTGCAGGATAAAATCCGCGCTAATCCACAAAACAGCGAACAGTGGGCGTTACTGGGCGAGTACTATCTGTGGCAAAACGATTACAGCAATTCGTTGCTGGCGTACCGTCAGGCGTTGCAACTACGTGGTGAGAACGCTGAACTGTATGCGGCGCTGGCGACGGTGCTTTATTACCAGGCCAGCCAGCATATGACCGCCCAGACTCGCGCAATGATCGACAAAGCCCTCGCGCTGGACAGTAATGAAATCACCGCCCTGATGCTGCTGGCTTCCGATGCGTTTATGCAGGCGAACTACGCGCAAGCCATCGAACTATGGCAAAAAGTGATGGATCTCAACTCACCGCGAGTTAACCGAACACAGCTGGTTGAGTCGATTAATATGGCGAAATTGTTGCAGCGGAGATTGGATTAATCATCTGGTGATGAAGATTATGTCATTGAGCTGCATAAAAAATAATCGAATGAACATATGCCAAAAA  >  CP009273/4283601‑4284134

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.