Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 2,209,300:3 +T 10.0% coding (656/732 nt) yehW ← inner membrane putative ABC superfamily transporter permease

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092732,209,3003.T10.0% 170.0 / 18.4 50coding (656/732 nt)yehWinner membrane putative ABC superfamily transporter permease
Reads supporting (aligned to +/- strand):  ref base . (22/23);  new base T (2/3);  total (24/26)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.84e-01

AGTTGGCAAGAACAAGGCCATGATATTTTCCCACTCGGCATTTAATGATTCGTTAACAAATGCGCTTTACTGTACAATCCTTTCGTTAACATAAGGAGTGCATTATGCGCATAGCTAAAATTGGGGTCATCGCCCTGTTCCTGTTTATGGCGTTAGGCGGAATTGGTGGCGTCATGCTCGCAGGTTATACCTTTATTTTGCGTGCTGGCTAAGCGCCTGCACCAGCCTTTCAAACAGGCGGTCTGCGATGATCGCCGCCAGTGCCACCA‑‑‑‑‑GTAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGTTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCGGTAGCTCGACCTTACGCACTCGCTGACCACGACTCATTCCCATAC  >  CP009273/2209032‑2209507
                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                 
atttggCAAGAACAAGGCCATGATATTTTCCCACTCGGCATTTAATGATTCGTTAACAAATGCGCTTTACTGTACAATCCTTTCGTTAACATAAGGAGTGCATTATGCGCATAGCTAAAATTGGGGTCATCGCCCTGTTCCTGTTTATGGCGTTAGGCGGAATTGGTGGCGTCATGCTCGCAGGTTATACCTTTATTTTGCGTGCTGGCTAAGCGCCTGCACCAGCCTTTCAAACAGGCGGTCTGCGATGATCGCCGCCAGTGCCACCA‑‑‑‑‑Gtaacg                                                                                                                                                                                                           >  1:354190‑M2/3‑270 (MQ=255)
               ggCCATGATATTTTCCCACTCGGCATTTAATGATTCGTTAACAAATGCGCTTTACTGTACAATCCTTTCGTTAACATAAGGAGTGCATTATGCGCATAGCTAAAATTGGGGTCATCGCCCTGTTCCTGTTTATGGCGTTAGGCGGAATTGGTGGCGTCATGCTCGCAGGTTATACCTTTATTTTGCGTGATGGCTAATCGCCGTCACCAGCCTGTCAAACAGGCGGTCTGCGATGATCGCCGCCAGGGCCACCA‑‑‑‑‑GTAACGCCCCCTGGAtatgc                                                                                                                                                                                             >  1:2820/1‑270 (MQ=255)
                    tGATATTTTCCCACTCGGCATTTAATGATTCGTTAACAAATGCGCTTTACTGTACAATCCTTTCGTTAACATAAGGAGTGCATTATGCGCATAGCTAAAATTGGGGTCATCGCCCTGTTCCTGTTTATGGCGTTAGGCGGAATTGGTGGCGTCATGCTCGCAGGTTATACCTTTATTTTGCGTNCTGGCTAANCGCCTGCACCAGCCTTTCAAACAGGCGGTCTGCGATGATCGCCGCCAGTGCCACCA‑‑‑‑‑GTAACGCACCCTGGATCACATAcgc                                                                                                                                                                                        >  1:478891/1‑274 (MQ=255)
                                                              cgcTTTGCTGTACAATCCTTTCGTTAACATAAGGAGTGCATTATGCGCATAGCTAAAATTGGGGTCATCGCCCTGTTCCTGTTTATGGCGTTAGGCGGAATTGGTGGCGTCATGCTCGCAGGTTATACCTTTATTTTGCGTGCTGGCTAAGCGCCTGCACCAGCCTTTCAAACAGGCGGTCTGCGATGATCGCCGCCAGTGCCACCA‑‑‑‑‑GTAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAg                                                                                                                                              <  1:341165/274‑1 (MQ=255)
                                                                   ggtgtgcgcctgcTTTCGTTAACATAAGGAGTGCATTATGCGCATAGCTAAAATTGGGGTCATCGCCCTGTTCCTGTTTATGGCGTTAGGCGGAATTGGTGGCGTCATGCTCGCAGGTTATACCTTTATTTTGCGTGCTGGCTAAGCGCCTGCACCAGCCTTTCAAACAGGCGGTCTGCGATGATCGCCGCCAGTGCCACCA‑‑‑‑‑GTAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGAGGGGCGTACCAAGCGTGcc                                                                                                                                        >  1:712650/13‑274 (MQ=255)
                                                                           aaTCCTTTCGTTAACATAAGGAGTGCATTATGCGCATAGCTAAAATTGGGGTCATCGCCCTGTTCCTGTTTATGGCGTTAGGCGGAATTGGTGGCGTCATGCTCGCAGGTTATACCTTTATTTTGCGTGCTGGCTAAGCGCCTGCACCCGCCTTTCAACCCGGCGGTCTGCGATGCTCGCCGCCAGTGCCCCCA‑‑‑‑‑Gt                                                                                                                                                                                                               <  1:27601‑M2/196‑2 (MQ=255)
                                                                           aaTCCTTTAGTTAACAGAAGGGGTGAATTGTGGGCATAGCTATAATTGGGGTCATGGCCCTGTTCCTGTTGATGGCGTTAGGCGGAATGGGTGGCGTCATGCTCGCAGGTTATACCTTTATTTTGCGTGCTGGCTAAGCGCCTGCACCAGCCTTTCAAACAGGCGGTCTGCGATGATCGCCGCCAGTGCCACCA‑‑‑‑‑GTAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTa                                                                                                                                <  2:654694/275‑1 (MQ=255)
                                                                               cTTTCGTTAACGTAAGGAGTGCATTAGGCGCATAGCTAAAATTGGGGTTATCGCCCTGTTCCTGTTTAGGGCGTTAGGGGGAATTGGTGGCGTCATGCTCGCAGGTTATACCTTTATGTTGCGTGCTGGCTAAGCGCCTGCACCAGCCTTTCAAACAGGCGGTCTGCGATGATCGCCGCCAGGGACACCA‑‑‑‑‑Gtaacg                                                                                                                                                                                                           >  2:27601‑M2/1‑191 (MQ=255)
                                                                               cTTTCGTTAACATAAGGAGTGCATTATGCGCATAGCTAAAATTGGGGTCATCGCCCTGTTCCTGTTTATGGCGTTAGGCGGAATTGGTGGCGTCATGCTCGCAGGTTATACCTTTATTTTGCGTGCTGGCTAAGCGCCTGCACCAGCCTTTCAAACAGGCGGTCTGCGATGATCGCCGCCAGTGCCACCA‑‑‑‑‑GTAACGCCCCCTGGATCACATACGCGGTAt                                                                                                                                                                                   >  1:441243/1‑220 (MQ=255)
                                                                                   cGTTAACATAAGGAGTGCATTATGCGCATAGCTAAAATTGGGGTCATCGCCCTGTTCCTGTTTATGGCGTTAGGCGGAATTGGTGGCGTCATGCTCGCAGGTTATACCTTTATTTTGCGTGCTGGCTAAGCGCCTGCACCAGCCTTTCAAACAGGCGGTCTGCGATGATCGCCGCCAGTGCCACCA‑‑‑‑‑GTAACGCCCCCTGGATCACATACGCGGTATTaaa                                                                                                                                                                               <  2:441236/220‑1 (MQ=255)
                                                                                        aCATAAGGAGTGCTTTATGCGCATAGTTAAAATTGGGTTCATCGCCCTGTTCCTGTTTATGGCGTTAGGGGGAATTGGTGGCGTCATGCTCGTAGGTTATACCTTTATTTTGCGTGCTGGCTNAGCGCCTGCACCAGCCTTTCAAACAGGCGGTCTGCGATGATAGCCGCCAGTGCCACCA‑‑‑‑‑GTAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGTTGAGGCGAt                                                                                                                   <  1:619257/275‑1 (MQ=255)
                                                                                         cATAAGGAGTGCATTATGCGCATAGCTAAAATTGGGGTCATCGCCCTGTTCCTGTTTATGGCGTTAGGCGGAATTGGTGGCGTCATGCTCGCAGGTTATACCTTTATTTTGCGTGCTGGCTAAGCGCCTGCACCAGCCTTTCAAACAGGCGGTCTGCGATGATCGCCGCCAGTGCCACCA‑‑‑‑‑GTAACGCCCCCt                                                                                                                                                                                                     >  1:282688/1‑192 (MQ=255)
                                                                                             aGGAGTGCATTATGCGCATAGCTAAAATTGGGGTCATCGCCCTGTTCCTGTTTATGGCGTTAGGCGGAATTGGTGGCGTCATGCTCGCAGGTTATACCTTTATTTTGCGTGCTGGCTAAGCGCCTGCACCAGCCTTTCAAACAGGCGGTCTGCGATGATCGCCGCCAGTGCCACCA‑‑‑‑‑GTAACGCCCCCTGGAt                                                                                                                                                                                                 <  2:282683/192‑1 (MQ=255)
                                                                                                  tGCATTATGCGCATAGCTAAAAATTGGGGTCATCGCCCTGTTCCTGTTTATGGCGTTAGGCGGAATTGGTGGCGTCATGCTCGCAGGTTATACCTTTATTTTGCGTGCTGGCTAAGCGCCTGCACCAGCCTTTCAAACAGGCGTCTGCGATGATCGCCGCAAGTGCCACCA‑‑‑‑‑Gtaacg                                                                                                                                                                                                           <  1:322426‑M2/177‑6 (MQ=255)
                                                                                                    cATTATTCGCATAGCTAAAATTGGGGTCATCGCCCTGTTCCTGTTTATGGCGTTAGGCGGAATTGGTGGCGTCATGCTCGCAGGTTATACCTTTATTTTGCGTGCTGGCTACGCGCCTGCACCAGCCTTTCAAACAGGCGGTCTGCGATGATCGCCGCCAGTGCCACCA‑‑‑‑‑GTAACGCCTCATGGATAACATACGCTGTATTAAATCCGCTAAGCCCTATAATGATGGGCTTACCCACCATGCTGGCCCCTCCCGTTACGCCGATCGTAGCCGtcc                                                                                                        >  1:403782/1‑272 (MQ=255)
                                                                                                      ttATGCGCATAGCGAAAAATTGGGGTCATCGCCCTGTTCCTTTTTATGTCGTTATGCGGAATTGGTTGCTTCATGCTCGCAGGTTATACCTTTATTTTGCGTGCTGGCTAAGCGCCTGCACCAGCCTTTCAAACAGTCGTCTGCGATTATCGCCGCCAGTGCCACCA‑‑‑‑‑GTAACGcccc                                                                                                                                                                                                       <  2:322420/177‑1 (MQ=255)
                                                                                                                aGCTAAAATTGGGGTCATCGCCCTGTTCCTGTTTATGGCGTTAGGCGGAATTGGTGGCGTCATGCTCGCAGGTTATACCTTTATTTTGCGTGCTGGCTAAGCGCCTGCACCAGCCTTTCAAACAGGCGGTCTGCGATGATCGCCGCCAGTGCCACCA‑‑‑‑‑GTAACGCCCCCTGGATCTCATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTAccc                                                                                                                                                <  1:672768/222‑1 (MQ=255)
                                                                                                                   ttAAAATTGGGGTCATCGCTCTGTTTCTGTTTATGGCGTGAGGTGGAATTGGTGGCGTCATGCTCGCAGGTCATACCTTTATTTTGCGTGCTGGCTAAGCGCCTGCACCAGCCTTTCAAACAGGCGGTCTGCGATGATCGCCGCCAGTGCCACCA‑‑‑‑‑GTAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGTTGAGGCGAt                                                                                                                   <  1:380752/248‑1 (MQ=255)
                                                                                                                              ggTCATCGCCCTGTTCCTGTTTATGGCGTTAGGCGGAATTGGTTGCGTCATGCTCGCAGGTTATACCTTTATTTTGCGTGCTGGGTAAGCGCCTGCACCAGCCTTTCAAGCAGGCGGTCTGCGATGATCGCCGCCAGTGCCACCA‑‑‑‑‑GTAACGCCCCCTGGATCCCATACGCGGAATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTCCTGGCCCCTACCATTGAGGCGCTCGTCGCGGTACCAACGTTGATAATCaaccaatgtcg                                                                               >  2:233091/1‑265 (MQ=255)
                                                                                                                                               tgtgTATGGCGTTGGTCGCAATTGGTGGCGTCCTGCTCGCAGGTTTTACTTTTATTTTGCTTGCTGGCTAAGCGCCTGCACCAGCCTTGCAAACAGGCGGTCTGCGATGATCGCCGCCAGTGCCACCA‑‑‑‑‑GTAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGTTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCa                                                              <  2:712640/275‑1 (MQ=255)
                                                                                                                                                     tGGCGTTAGGCGGAATTGGTGGCGTCATGCTCGCAGGTTATACCTTTATTTTGCGTGCTGGCTAAGCGCCTGCACCAGCCTTTCAAACAGGCGGTCTGCGATGATCGCCGCCAGTGCCACCA‑‑‑‑‑TTCACGCCCCCTGGATcaca                                                                                                                                                                                             >  2:676374/1‑142 (MQ=255)
                                                                                                                                                     tGGCGTTAGGCGGAATTGGTGGCGTCATGCTCGCAGGTTATACCTTTATTTTGCGTGCTGGCTAAGCGCCTGCACCAGCCTTTCAAACAGGCGGTCTGCGATGATCGCCGCCAGTGCCACCA‑‑‑‑‑Gt                                                                                                                                                                                                               <  1:226629‑M2/124‑2 (MQ=255)
                                                                                                                                                         gTTAGGCGGAATTGGTGGCGTCATGCTCGCAGGTTATACCTTTATTTTGCGTGCTGGCTAAGCGCCTGCACCAGCCTTTCAAACAGGCGGTCTGCGATGATCGCCGCCAGTGCCACCA‑‑‑‑‑Gtaacg                                                                                                                                                                                                           >  2:226624‑M2/1‑119 (MQ=255)
                                                                                                                                                         gTTAGGCGGAATTGGTGGCGTCATGCTCGCAGGTTATACCTTTATTTTGCGTGCTGGCTAAGCGCCTGCACCAGCCTTTCAAACAGGCGGTCTGAGATGATCGCCGCCAGTGCCACCA‑‑‑‑‑GTAACGCCCCCTGGATCACATAcg                                                                                                                                                                                         <  1:676383/142‑1 (MQ=255)
                                                                                                                                                                                                   tATTTTGCGTGCTGGCTAAGCGCCTGCACCAGCCTTTCAAACAGGCGGTCTGCGATGATCGCCGCCAGTGCCACCAATTCCGcctaacgccataaacaggaacagggcgctgaccccaattttag                                                                                                                                                                     <  2:293386‑M2/125‑44 (MQ=255)
                                                                                                                                                                                                   tATTTTGCGTGCTGGCTAAGCGCCTGCACCAGCCTTTCAAACAGGCGGTCTGCGATGATCGCCGCCAGTGCCACCAATTCCGcctaacgccataaacaggaacagggcgatgaccccaattttagct                                                                                                                                                                   <  1:107253‑M2/127‑46 (MQ=255)
                                                                                                                                                                                                   tATTTTGCGTGCTGGCTAAGCGCCTGCACCAGCCTTTCAAACAGGCGGTCTGCGATGATCGCCGCCAGTGCCACCAATTCCGcctaacgccataaacaggaacagggcgatgaccccaattttag                                                                                                                                                                     <  1:24663‑M2/125‑44 (MQ=255)
                                                                                                                                                                                                   tATTTTGCGTGCTGGCTAAGCGCCTGCACCAGCCTTTCAAACAGGCGGTCTGCGATGATCGCCGCCAGTGCCACCA‑‑‑‑‑Gtaacgccataaacaggaacagggcgatgaccccaattttagctatgcgcataatgcactccttatgttaacgaaag                                                                                                                                    <  1:419988‑M2/153‑77 (MQ=255)
                                                                                                                                                                                                   tATTTTGCGTGCTGGCTAAGCGCCTGCACCAGCCTTTCAAACAGGCGGTCTGCGATGATCGCCGCCAGTGCCACCA‑‑‑‑‑GTAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGCGCTGGCCCCTACCGTTGAAGCGATCGTCGCCGTACCAATGTTGATAATCACCGACGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAACGGTAACACAACCTTCCCCACACGCTAACAACGACTcc           >  2:715371/1‑273 (MQ=255)
                                                                                                                                                                                                   tATTTTGCGTGCTGGCTAAGCGCCTGCACCAGCCTTTCAAACAGGCGGTCTGCGATGATCGCCACCAATTCCGCC‑‑‑‑‑aacgccataaacaggaacagggcgatgaccccaattttagctatgcgcataatgcactccttatgttaacgaaag                                                                                                                                      <  1:120971‑M2/151‑76 (MQ=255)
                                                                                                                                                                                                   tATTTTGCGTGCTGGCTAAGCGCCTGCACCAGCCTTTCAAACAGGCGGTCTGCGATGACGCCACCAATTCCGCC‑‑‑‑‑aacgccataaacaggaacagggcgatgaccccaattttag                                                                                                                                                                         <  2:113050‑M2/115‑41 (MQ=255)
                                                                                                                                                                                                   tATTTTGCGTGCTGGCTAAGCGCCTGCACCAGCCTTTCAAACAGGCGGTCTGCGATGACGCCACCAATTCCGCC‑‑‑‑‑aacgccataaacaggaacagggcgatgaccccaattttag                                                                                                                                                                         <  1:255125‑M2/115‑41 (MQ=255)
                                                                                                                                                                                                       ttGCGTGCTGGCTAAGCGCCTGCACCAGCCTTTCAAACAGGCGGTCTGCGATGATCGCCGCCAGTGCCACCAATTCCGcctaacgccataaacaggaacagggcgatgaccccaattttagctatgc                                                                                                                                                               >  2:107252‑M2/1‑78 (MQ=255)
                                                                                                                                                                                                       ttGCGTGCTGGCTAAGCGCCTGCACCAGCCTTTCAAACAGGCGGTCTGCGATGATCGCCGCCAGTGCCACCAATTCCGcctaacgccataaacaggaacagggcgatgaccccaattttagctat                                                                                                                                                                 >  1:293392‑M2/1‑78 (MQ=255)
                                                                                                                                                                                                       ttGCGTGCTGGCTAAGCGCCTGCACCAGCCTTTCAAACAGGCGGTCTGCGATGATCGCCGCCAGTGCCACCA‑‑‑‑‑Gtaacgccataaacaggaacagggcgatgaccccaattttagctatgcgcataatgcactccttatgttaacgagaggatt                                                                                                                                >  2:419981‑M2/1‑73 (MQ=255)
                                                                                                                                                                                                       ttGCGTGCTGGCTAAGCGCCTGCACCAGCCTTTCAAACAGGCGGTCTGCGATGATCGCCACCAATTCCGCC‑‑‑‑‑aacgccataaacaggaacagggcgatgaccccaattttagctatgcgcataatgcactccttatgttaacgaaaggatt                                                                                                                                  >  2:120970‑M2/1‑72 (MQ=255)
                                                                                                                                                                                                       ttGCGTGCTGGCTAAGCGCCTGCACCAGCCTTTCAAACAGGCGGTCTGCGATGACGCCACCAATTCCGCC‑‑‑‑‑aacgccataaacaggaacagggcgatgaccccaattttagctat                                                                                                                                                                     >  1:113051‑M2/1‑71 (MQ=255)
                                                                                                                                                                                                       ttGCGTGCTGGCTAAGCGCCTGCACCAGCCTTTCAAACAGGCGGTCTGCGATGACGCCACCAATTCCGCC‑‑‑‑‑aacgccataaacaggaacagggcgatgaccccaattttagctat                                                                                                                                                                     >  2:255120‑M2/1‑71 (MQ=255)
                                                                                                                                                                                                          cGTGCTGGCTAAGCGCCTGCACCAGCCTTTCAAACAGGCGGTCTGCGATGATCGCCGCCAGTGCCACCA‑‑‑‑‑GTAACGCCCCCTGGATCACAt                                                                                                                                                                                            >  1:194237/1‑90 (MQ=255)
                                                                                                                                                                                                          cGTGCTGGCTAAGCGCCTGCACCAGCCTTTCAAACAGGCGGTCTGCGATGATCGCCGCCAGTGCCACCA‑‑‑‑‑GTAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGTTGAGGCGa                                                                                                                    >  2:684243/1‑162 (MQ=255)
                                                                                                                                                                                                          cGTGCTGGCTAAGCGCCTGCACCAGCCTTTCAAACAGGCGGTCTGCGATGATCGCCGCCAGTGCCACCA‑‑‑‑‑GTAACGCCCCCTGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGTTGAGGCGATCGTCGCCGTCCCAATGTTGATAATCACCGACGTTCGCACGCCCGCCCGAATCACCGGAGCCGCCAGCGGTAGCTCGACCTTACGCACTCGCTCACCACGACTCCTTCCCCTAc  >  1:382442/1‑275 (MQ=255)
                                                                                                                                                                                                              cTGGCTAAGCGCCTGCACCAGCCTTTCAAACAGGCGGTCTGCGATGATCGCCGCCAGTGCCACCA‑‑‑‑‑GTAACGCCCCCTGGATCACATAcgc                                                                                                                                                                                        <  2:194234/90‑1 (MQ=255)
                                                                                                                                                                                                              cTGGCTAAGCGCCTGCACCAGCCTTTCAAACAGGCGGTCTGCGATGATCGCCGCCAGTGCCACCA‑‑‑‑‑GTAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATTATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGTTGAGGCGAtcgt                                                                                                                <  1:684252/162‑1 (MQ=255)
                                                                                                                                                                                                                           tGCACCAGCCTTTCAAACAGGCGGTCTGCGATGATCGCCGCCAGTGCCACCA‑‑‑‑‑Gtaacgccataaacaggaacagggcgatgaccccaattttagctatgcgcataatgcactccttatgttaacgacac                                                                                                                                    <  2:179988‑M2/129‑77 (MQ=255)
                                                                                                                                                                                                                                       tCAAACAGGCGGTCTGCGATGATCGCCGCCAGTGCCACCA‑‑‑‑‑GTAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAg                                                                                                                                                                      >  2:483736/1‑83 (MQ=255)
                                                                                                                                                                                                                                         aaaCAGGCGGTCTGCGATGATCGCCGCCAGTGCCACCA‑‑‑‑‑Gtaacgccataaacaggaacagggcgatgaccccaattatag                                                                                                                                                                       <  1:109487‑M2/80‑42 (MQ=255)
                                                                                                                                                                                                                                           aCAGGCGGTCTGCGATGATCGCCGCCAGTGCCACCA‑‑‑‑‑GTAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCg                                                                                                                                                                  <  1:483743/83‑1 (MQ=255)
                                                                                                                                                                                                                                             aGGCGGTCTGCGATGATCGCCGCCAGTGCCACCA‑‑‑‑‑Gtaacgccataaacaggaacagggcgatgaccccaattatagctat                                                                                                                                                                   >  2:109486‑M2/1‑35 (MQ=255)
                                                                                                                                                                                                                                                   tCTGCGATGATCGCCGCCAGTGCCACCA‑‑‑‑‑GTAACGCCCCCTGGATCACATACGCGGTATTAAATc                                                                                                                                                                             >  1:300142/1‑64 (MQ=255)
                                                                                                                                                                                                                                                       cGATGATCGCCGCCAGTGCCACCA‑‑‑‑‑GTAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCt                                                                                                                                                                         <  2:300136/64‑1 (MQ=255)
                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                 
AGTTGGCAAGAACAAGGCCATGATATTTTCCCACTCGGCATTTAATGATTCGTTAACAAATGCGCTTTACTGTACAATCCTTTCGTTAACATAAGGAGTGCATTATGCGCATAGCTAAAATTGGGGTCATCGCCCTGTTCCTGTTTATGGCGTTAGGCGGAATTGGTGGCGTCATGCTCGCAGGTTATACCTTTATTTTGCGTGCTGGCTAAGCGCCTGCACCAGCCTTTCAAACAGGCGGTCTGCGATGATCGCCGCCAGTGCCACCA‑‑‑‑‑GTAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGTTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCGGTAGCTCGACCTTACGCACTCGCTGACCACGACTCATTCCCATAC  >  CP009273/2209032‑2209507

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: