New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	3427751 =	31 (0.810)	9 (0.250)	5/300	NT	21.0%	coding (179/948 nt)	fmt	10‑formyltetrahydrofolate:L‑methionyl‑tRNA(fMet) N‑formyltransferase
	?	CP009273	3428140 =	38 (1.030)					coding (568/948 nt)	fmt	10‑formyltetrahydrofolate:L‑methionyl‑tRNA(fMet) N‑formyltransferase

CTTTCGGCAGAATTAAACCATAGGCGACGACGACCATAACATCAGCCTGCAGTTCGGCGACCAGTTGCTGGTTTTCTTGTGGACGCAGGGAAACAGGTTGAAAAACGGGCAGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/3427864‑3427751 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagacGGCACGGCGAAACCAGAAGTTCAGGACGAAACTCTTGTCACTTACGCCGAGAAGTTGAGTAAAGAAGAAGCGCGTATTGACTGGTCACTTTCGGCAGCACAGCTTGAACGCTGCATTCGCGCTTTCAATCCATGGCCAATGAGCTGGCTGGAAATTGAAGGACAGCCGGTTAAAGTCTGGAAAGCATCGGTCATTGATACGGCAACCAACGCTGCACCAGGAACGATCCTTGAAGCCAACAA  >  CP009273/3428140‑3428381                                                                                                                                                                                                                                                                                                                                                                      CTTTCGGCAGAATTAAACCATAGGCGACGACGACCATAACATCAGCCTGCAGTTCGGCGACCAGTTGCTGGTTTTCTTGTGGACGCAGGGAAACAGGTTGAAAAACGGG                                                                                                                                                                                                                                                         >  1:59978/1‑109     CGGCAGAATTAAACCATAGGCGACGACGACCATAACATCAGCCTGCAGTTCGGCGACCAGTTGCTGGTTTTCTTGTGGACGCAGGGAAACAGGTTGAAAAACGGGCAGA                                                                                                                                                                                                                                                     <  2:59977/109‑1                    ATAGGCGACGACGACCATAACATCAGCCTGCAGTTCGGCGACCCGTTGCTGGTTTTCTTGTGGACGCAGGGAAACAGGTTGAAAAACGGGCAGACGGCACGGCGAAACCAGAAGGTCAGGACGAAACTCTTGTCACTTACGCCGAGAGGTTGAGTAAANAAGAAGCGCGAATTGACTGGTCACTTTCGGCAGCACAGCTTGAACGCTGCATTCGCGCTTTCAATCCATGGCCAATGAGCTGGCAGGAAATTGAAGGACAGCCGGTTAAAGTCTag                                                                >  1:650001/1‑273                    ATAGGCGACGACGACCATAACATCAGCCTGCAGTTCGGCGACCAGTTGCTGGTTTTCTTGTGGACGCAGGGAAACAGGTTGAAAAACGGGCAGACGGCACGGCGAAACCAGAAGTTCAGGACGAAACTCTTGTCACTTACGCCGAGAAGTTGAGTAAAGAAGAAGCGC                                                                                                                                                                           >  1:384781/1‑168                    ATAGGCGACGACGACCATAACATCAGACTGCAGTTCGGCGACCAGTTGCTGGTTTTCTTGTGGACGCAGGGAAACAGGTTGAAAAACGGGCAGACGGCACTGCGAAACCAGAAGTTCAGGACGACCCTCTTGTCACTTACGCCGAGAAGATGAGTAAAGAAGAAGCGCGTATTGCCTGGTCACTCTCGGCAGCCAAGCTTGAAAGCTGCATTCGCACTCTAAAGCCATGACCAAGGAGCTGACCGGTCATTGAAGGACAGCCGGTTGAAGCCTta                                                                >  2:158482/1‑273                     TAGGCGACGACGACCATAACATCAGCCTGCAGTTCGGCGACCAGTTGCTGGTTTTCTTGTGGACGCAGGGAAACAGGTTGAAAAACGGGCAGACGGCACGGCGAAACCAGAAGTTCAGGACGAAACTCTTGTCACTTACGCCGAGAAGTTGAGTAAAGAAGAAGCGCGTATTGACTGGTCACTTTCGGCAGCACAGCTTGAACGCTGCATTCGCGCTTTCAATCCATGGCCAATGAGCTGGAGGGAAATTTAGGGCCAGCTGAGTAAAGTCTTGA                                                               >  2:573741/1‑275                     TAGGCGACGACGACCATAACATCAGCCTGCAGTTCGGCGACCAGTTGCTGGTTTTCTTGTGGACGCAGGGAAACAGGTTGAAAAACGGGCAGACGGCACGGCGAAACCAGAAGTTCAGGACGAAACTCTTGTCACTTACGCCGAGAAGTTGAGTAAAGAAGAAGCGCGTATTGACTGGTCACTTTCGG                                                                                                                                                      >  2:97816/1‑188                     TAGGCGACGACGACCATAACATCAGCCTGCAGTTCGGCGACCAGTTGCTGGTTTTCTTGTGGACGCAGGGAAACAGGTTGAAAAACGGGCAGACGGCAAGGCGAAACAAGAAGTTCAGGACGAAACTATTGTCACTTACGCCGAGAAGTTGAGTAAAGAAGAAGCGCGTATTGACTGGTCACTTTCGGAAGCACAGCTTGAACGCTGCATTCGCGCTTTCAATCCATAGCAAATGAGCTGGCTGGAAATTGAAGGACAGCGGGATAAAGTATGGA                                                               >  1:279796/1‑275                        GCGACGACGACCATAACATCAGCCTGCAGTTCGGCGACCAGTTGCTGGTTTTCTTGTGGACGCAGGGAAACAGGTTGAAAAACGGGCAGACGGCACGGCGAAACCAGAAGTTCAGGACGAAACTCTTGTCACTTACGCCGAGAAGTTGAGTAAAGAAGAAGCGCGTAT                                                                                                                                                                       <  2:384775/168‑1                         CGACGACGACCATAACATCAGCCTGCAGTTCGGCGACCAGTTGCTGGTTTTCTTGTGGACGCAGGGAAACAGGTTGAAAAACGGGCAGACGGCACGGCGAAACCAGAAGTTCAGGACGAAACTCTTGTCACTTACGCCGAGAAGTTGAGTAAAGAAGAAGCGCGTATTGACTGGTCACTTTCGGCAGC                                                                                                                                                  <  1:97817/188‑1                                                      TCGGCGACCAGTTGCTGGTTTTCTTGTGGACGCAGGGAAACAGGTTGAAAAACGGGCA                                                                                                                                                                                                                                                       <  2:52037/58‑1                                                                                   acaCAGGGGAACAGGTTGAAAAACGTGCAGACGGCACGGCGAAACCAGAAGTTCAGGACGAAACTCTTGTCACTTACGCCGAGAAGATGAGTAAAGAAGAAGCGCGTATTGACAGGTCACTTTCGGCAGCACAGCTTGAACGCTGCATTCGCGCTTTCAATCCATGGCCAATGCGCTGGCGGGAAATTGAAGGACAGTCGGTTAAAGTCTGGAAAGCATCGGTCATTGATACGGCAACCAACGCTGCACCAGGAACGATCCTTGAAGCCAACAA  <  1:158485/271‑1                                                                                                                  CGGCACGGCGAAACCAGAAGTTCAGGACGAAACTCTTGTCACTTACGCCGAGAAGTTGAGTAAAGAAGAAGCGCGTATTGACTGGTCACTTTCGGCAGCACAGCTTGAACGCTGCATTCGCGCTTTCAATCCATGGCCAATGAGCTGGCTGGAAATTGAAGGACAGCCGGTTAAAGTCTGGAAAGCATCGGTCATTGATACGGCAACCAACGCTGCACCAGGAACGATCCTTGAAGCCAACA   >  1:335533/1‑242                                                                                                                                                                                                                                                                                                                                                                      CTTTCGGCAGAATTAAACCATAGGCGACGACGACCATAACATCAGCCTGCAGTTCGGCGACCAGTTGCTGGTTTTCTTGTGGACGCAGGGAAACAGGTTGAAAAACGGGCAGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/3427864‑3427751 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagacGGCACGGCGAAACCAGAAGTTCAGGACGAAACTCTTGTCACTTACGCCGAGAAGTTGAGTAAAGAAGAAGCGCGTATTGACTGGTCACTTTCGGCAGCACAGCTTGAACGCTGCATTCGCGCTTTCAATCCATGGCCAATGAGCTGGCTGGAAATTGAAGGACAGCCGGTTAAAGTCTGGAAAGCATCGGTCATTGATACGGCAACCAACGCTGCACCAGGAACGATCCTTGAAGCCAACAA  >  CP009273/3428140‑3428381

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.