| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3740155 = | 64 (1.670) | 8 (0.220) | 6/296 | NT | 12.1% | coding (702/987 nt) | yiaO | 2,3‑diketo‑L‑gulonate‑binding periplasmic protein |
| ? | CP009273 | 3740245 = | 56 (1.550) | coding (792/987 nt) | yiaO | 2,3‑diketo‑L‑gulonate‑binding periplasmic protein | |||||
TGCACCTCATCCACGGCTTTCAGCAGATCAGCTCCCTGCGGCACATCTTTAACAAACATGTCGCGAACCTGATTCCCCAGTGCGTCGCTAAAGGCTTTGCGGTCGAGATCGGTGATGACTTCCACGCCCGCTTCTTTCATGCCGTCGATGATTTTTTGCTGATCTTCAGCAACCAGTTTGCGCTGATAGTTACCCGCTTCTTGTGCAGATGAAACTAGCGCCTGCTGGAACTCCGGACTTAAGCCATCAAACTTCGCTTTGTTGATCACCACCAGAAGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3740436‑3740155‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agaagcgggTAACTATCAGCGCAAACTGGTTGCTGAAGATCAGCAAAAAATCATCGACGGCATGAAAGAAGCGGGCGTGGAAGTCATCACCGATCTCGACCGCAAAGCCTTTAGCGACGCACTGGGGAATCAGGTTCGCGACATGTTTGTTAAAGATGTGCCGCAGGGAGCTGATCTGCTGAAAGCCGTGGATGAGGTGCAATAAACCATGACGCAATACTGGCTGGGGTTAGATTGTGGCGGTAGCTGGCTGAAAGCCGGGCTGTATGACCGCGA > CP009273/3740245‑3740511 TGCACCTCATCCACGGCTTTCAGCAGATCAGCTCCCTGCGGCACATCTTTAACAAACATGTCGCGAACCTGATTCCCCAGTGCGTCGCTAAAGGCTTTGCGGTCGAGATCGGTGATGACTTCCACGCCCGCTTCTTTCAGGCCGTCGATGATTTTTTGCTGATCTTCAGCAACCAGTTTGCGCTGATAGTTACCCGCTTCTTGTGCAGATGAAACTAGCGCCTGCTGGNAACCCGGACTTAAGCCATCAAGCTTCTCTTTGAGATTCACCACCA > 2:441703/1‑274 CACCTCATCCACGGCTTTCAGCAGATCAGCTCCCTGCGGCACATCTTTAACAAACATGTCGCGAACCTGATTCCCCAGTGCGTCGCTAAAGGCTTTGCGGTCGAGATCGGTGATGACTTCCACGCCCGCTTCTTTCATGCCGTCGATGATTTTTTGCTGATCTTCAGCAACCAGTTTGCGCTGATAGTTACCCGCTTCTTGTGCAGATGAAACTAGCGCCTGCTGGAACTCCGGACTTAAGCCATCAAACTTCGCTTTGTTGATCACCACCAGA > 1:186889/1‑274 ccctaacccgntCTTTCAGCAGATCAGCTCCCTGCGGCACATCTTTAACACACATGTCGCGAACCTGATTCCCCGGTGCGTCGCTAAAGGCTTTGCGGTCGAGATCGGTGATGACTTCCACGCCCGCTTCTTTCATGCCGTCGATGATTTTTTGCTGATCTTCAGCAACCAGTTTGCGCTGATAGTTACCCTCTTCTTGTGCAGATGAAACTAGCGCCTGCTGGAACTCCGGACTTAAGCCATCAAACTTCGCTTTGTTGATCACCACCAGAAG < 2:62037/262‑1 CTCATCCACGGCTTTCAGCAGATCAGCTCCCTGCGGCACATCTTTAACAAACATGTCGCGAACCTGATTCCCCAGTGCGTCGCTAAAGGCTTTTCGGTCGAGATCGGTGATGACTTCCACGCCCGCTTCTTTCATGCCGTCGATGATTTTTTGCTGATCTTCAGCAACCAGTTTGCGCTGATAGTTACCCGCTTCTTGTGCAGACGAAACTAGCGCCTGCTGGAAGTCCGGACTTAAGCAGTCAAACTTCGCTTGGTTGATCACCACCAGAAGCt > 2:678946/1‑274 CTCATCCACGGCTTTCAGCAGATCAGCTCCCTGCGGCACATCTTTAACAAACATGTCGCGAACCTGATTCCCCAGTGCGTCGCTAAAGGCTTTGCGGTCGAGATCGGTGATGACTTCCACGCCCGCTTCTTTCATGCCGTCGATGATTTTTTGCTGATCTTCAGCAACCAGTTTGCGCTGATAGTTACCCGCTTCTTGTGCAGATGAAACTAGCGCCTGCTGGAACTCCGGACTAAAGCCAACAAACTTCGCTTTGTTGATCACCACAAGAAGag > 1:353098/1‑273 tccTCCACGGCTTTCAGCAGATCAGCTCCCGGCGGCACATCTTTAACTAACATGTCGCGAACCTGATTCCCCAGTGCGTCGCTAAAGGCTTTGCGGTCGAGATCGGTGATGACTTCCACGCCCGCTTCTTTCATGCCGTCGATGATTTTTTGCTGATCTTCAGCAACCAGTTTGCGCTGATAGTTACCCGCTTCTTGTGCAGATGAAACTAGCGCCTGCTGGAACTCCGGACTTAAGCCATCAAACTTCGCTTTGTTGATCACCACCAGAAGCG < 2:186886/271‑1 CATCCACGGCTTTCAGCAGATCAGCTCCCTGCGGCACATCTTTAACAAACATGTCGCGAACCTGATTCCCCAGTGCGTCGCTAAAGGCTTTGCGGTCGAGATCGGTGATGACTTCCACGCCCGCTTCTTTCATGCCGTCGATGATTTTTTGCTGATCTTCAGCAACCAGTTTGCGCTGATAGTTACCCGCTTCTTGTGCAGATGCAACTAGCGCCTGCTGGAACTCCGGACTTAAGCCATCAAACTTCTCCTTGTTGATCGCCACCAGAATCGG > 2:644251/1‑274 CTTTAACAAACATGTCGCGAACCTGATTCCCCAGTGCGTCGCTAAAGGCTTTGCGGTCGAGATCGGTGATGACTTCCACGCCCGCTTCTTTCATGCCGTCGATGATTTTTTGCTGATCTTCAGCAACCAGTTTGCGCTGATAGTTACCCGCTTCTTGTGCAGATGAAACTAGCGCCTGCTGGAACTCCGGACTTAAGCCATCAAACTTCGCTTTGTTGATCACCACCAGA > 1:244284/1‑230 AACAAACATGTCGCGAACCTGATTCCCCAGTGCGTCGCTAAAGGCTTTGCGGTCGAGATCGGTGATGACTTCCACGCCCGCTTCTTTCATGCCGTCGATGATTTTTTGCTGATCTTCAGCAACCAGTTTGCGCTGATAGTTACCCGCTTCTTGTGCAGATGAAACTAGCGCCTGCTGGAACTCCGGACTTAAGCCATCAAACTTCGCTTTGTTGATCACCACCAGAAGCG < 2:244279/230‑1 TCGCTAAAGGCTTTGCGGTCGAGATCGGTGATGACTTCCACGCCCGCTTCTTTCATGCCGTCGATGATTTTTTGCTGATCTTCAGCAACCAGTTTGCGCTGATAGTTACCCGCTTCTTGTGCAGATGAAACTAGCGCCTGCTGGAACTCCGGACTTAAGCCATCAAACTTCGCTTTGTTGATCACCACCAGAA < 1:21720/193‑1 CACGCCCGCTTCTTTCATGCCGTCGATGATTTTTTGCTGATCTTCAGCAACCAGTTTGCGCTGATAGTTACCCGCTTCTTGTGCAGATGAAACTAGCGCCTGCTGGAACTCCGGACTTAAGCCATCAAACTTCGCTTTGTTGATCACCACCAGAAGCGG > 1:29305/1‑159 ATGAAACTAGCGCCTGCTGGAACTCCGGACTTAAGCCATCAAACTTCGCTTTGTTGATCACCACCAGAAGCGGGTAACTATCAGCGCAAAC > 2:650393/1‑91 AACTAGCGCCTGCTGTAACTCCGGACTTCAGCCATCAAACTTCGCTTTGTTGATCACCACCAGAAGCGGGTAACTATCAGCGCAAACTGGTTGCTGAAGATCAGCAAAAAATCATCGACGGCATGAAAGAA > 1:485914/1‑131 AACTAGCGCCTGCTGGAACTCCGGACTTAAGCCATCAAACTTCGCTTTGTTGATCACCACCAGAAGCGGGTAACTATCAGCGCAAACTGGTTGCTGAAGATCAGCAAAAAATCATCGACGGCA > 1:612371/1‑123 AACTAGCGCCTGCTGGAACTCCGGACTTAAGCCATCAAACTTCGCTTTGTTGATCACCACCAGAAGCGGGTAACTATCAGCGCAAACTGGTTGCTGAAGATCAGCAAAAAATCATCG > 1:230158/1‑117 AACTAGCGCCTGCTGGAACTCCGGACTTAAGCCATCAAACTTCGCTTTGTTGATCACCACCAGAAGCGGGTAACTATCAGCGCAAACTGGT < 1:650402/91‑1 AGCGCCTGCTGGAACTCCGGACTTAAGCCATCAAACTTCGCTTTGTTGATCACCACCAGAAGCGGGTAACTATCAGCGCAAACTGGTTGCTGAAGATCAGCAAAAAATCATCGACGGCATGAA < 2:612362/123‑1 AGCGCCTGCTGGAACTCCGGACTTAAGCCATCAAACTTCGCTTTGTTGATCACCACCAGAAGCGGGTAACTATCAGCGCAAACTGGTTGCTGAAGATCAGCAAAAAATCATCGACGG < 2:230153/117‑1 AGCGCCTGCTGGAACTCCGGACTTAAGCCATCAAACTTCGCTTTGTTGATCACCACCAGAAGCGAGTAACTATCAGCGCAAACTGGTTGCTGAAGATCAGCAAAAAATCATCGACGGCATGAAAGAAGCGG < 2:485907/131‑1 AGAAGCGGGTAACTATCAGCGCAAACTGGTTGCTGAAGATCAGCAAAAAATCATCGACGGCATGAAAGAAGCGGGCGTGGAAGTCATCACCGATCTCGACCGCAAAGCCTTTAGCGACGCACTGGGGAATCAGGTTCGCGACATGTTTGTTAAAGATGTGCCGCAGGGAGCTGATCTGCTGAAAGCCGTGGATGAGG < 1:346422/197‑1 GAAGCGGGTAACTATCAGCGCAAACTGGTTGCTGAAGATCAGCAAAAAATCATCGACGGCATGAAAGAAGCGGGCGTGGAAGTCATCACCGATCTCGACCGCAAAGCCTTTAGCGACGCACTGGGGAATCAGGTTCGCGACATGTTTGTTAAAGATGTGCCGCAGGGAGCTGATCTGCTGAAAGCCGTGGATGAGGTGCAATAAACCATGACGCAATACTGGCTGGGGTTAGATTGTGGCGGTAGCTGGCTGAAAGCCGGGCTGTATGACCGCGA > 1:442956/1‑275 GGGTAACTATCAGCGCAAACTGGTTGCTGAAGATCAGCAAAAAATCATCGACGGCATGAAAGAAGCGGGCGTGGAAGTCATCACCGATCTCGACCGCAAAGCCTTTAGCGACGCACTGGGGAATCAGGTTCGCGACATGTTTGTTAAAGATGTGCCGCAGGGAGCTGATCTGCTGAAGGCCGTGGATGAGGTGCAATAAACCATGACGCAATACTGGCTGGGGTTAGATTGTGGCGGTAGCTGGCTGA > 1:362583/1‑248 TGCACCTCATCCACGGCTTTCAGCAGATCAGCTCCCTGCGGCACATCTTTAACAAACATGTCGCGAACCTGATTCCCCAGTGCGTCGCTAAAGGCTTTGCGGTCGAGATCGGTGATGACTTCCACGCCCGCTTCTTTCATGCCGTCGATGATTTTTTGCTGATCTTCAGCAACCAGTTTGCGCTGATAGTTACCCGCTTCTTGTGCAGATGAAACTAGCGCCTGCTGGAACTCCGGACTTAAGCCATCAAACTTCGCTTTGTTGATCACCACCAGAAGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3740436‑3740155‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agaagcgggTAACTATCAGCGCAAACTGGTTGCTGAAGATCAGCAAAAAATCATCGACGGCATGAAAGAAGCGGGCGTGGAAGTCATCACCGATCTCGACCGCAAAGCCTTTAGCGACGCACTGGGGAATCAGGTTCGCGACATGTTTGTTAAAGATGTGCCGCAGGGAGCTGATCTGCTGAAAGCCGTGGATGAGGTGCAATAAACCATGACGCAATACTGGCTGGGGTTAGATTGTGGCGGTAGCTGGCTGAAAGCCGGGCTGTATGACCGCGA > CP009273/3740245‑3740511 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |