New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	4215816 =	60 (1.560)	5 (0.130)	5/304	NT	7.3%	coding (2061/3684 nt)	metH	homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent
	?	CP009273	4216935 =	69 (1.850)					coding (3180/3684 nt)	metH	homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent

TGGCGATCACCATCTTGCCGTTGGTTTTGCCCTGCTCTTTGCTGGCTTCAATAAACGGTTCGAGGTAGGCCACCGCCTGTTTCATGACGCGCGCCGATTTGACCACCTGTGGCAGGAACATTTTCCCTTCGCCAAACAGGTCGCCGACCACATTCATGCCGTCCATCAACGGGCCTTCAATCACTTCAATCGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/4216012‑4215816 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcATTTGCCGTGACTGGCGGGCTGGAAGAGGACGCACTGGCTGATGCCTTTGAAGCGCAGCACGATGATTACAACAAAATCATGGTGAAAGCGCTTGCCGACCGTTTAGCCGAAGCCTTTGCGGAGTATCTCCATGAGCGTGTGCGTAAAGTCTACTGGGGCTATGCGCCGAACGAGAACCTCAGCAACGAAGAGCTGATCCGCGAAAACTACCAGGGCATCCGTCCGGCACCGGGCTATCCGGCCTGCCCGGAACATACGGAAAAAGCCACCA  >  CP009273/4216935‑4217206                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       aGGCGATCACCATCTTGCCGTTGGTTTTGCCCTGCTCTTTGCTGGCTTAAATAAACGTTTCGAGGTAGGCCACCGCCTGTTTCATGACGCGNGCCTATTTGACCACCTGTGGCAGGAACATTTTCCCTTCGCCAAACAGGTCGCCGACCACATTCATGCCGTCCATCAACGGGCCTTCAATCACTTCAATCGGGCGCATTTGCCGTGACTGGCGGGCTGGAAGAGGACGCACTGGCTGATGCCTTTGAAGCGCAGCACGATGATTACAACAAAAT                                                                                                                                                                                                    <  1:538498/274‑1                                  GCTCTTTGCTGGCTTCAATAAACGGTTCGAGGTAGGCCACCGCCTGTTTCATGACGCGCGCCGATTTGACCACCTGTGGCAGGAACATTTTCCCTTCGCCAAACAGGTCGCCGACCACATTCATGCCGTCCATCAACGGGCCTTCAATCACTTCAATCGGGCGCATTTGCCGTGACTGGCGGGCTGGAAGAGGACGCACTGGCTGATGCCTTTGAAGCGCAGCACGATGATTACAACAAAA                                                                                                                                                                                                     >  1:187893/1‑241                                      TTTGCTGGCTTAAATAAACGGTTCGAGGTAGGCCACCGCCTGTTTCATGACGCGCGCCGATTTGACCACCTGTGGCAGGAACATTTTCCCTTCGCCAAACAGGTCGCCGACCACATTCATGCCGTCCATCAACGGGCCTTCAATCACTTCAATCGGGCGCATTTGCCGTGACTGGCGGGCTGGAAGAGGACGCACTGGCTGATGCCTTTGAAGCGCAGCACGATGATTACAACAAAATCAT                                                                                                                                                                                                 <  2:187890/241‑1                                                                     GCCACCGCCTGTTTCATGACGCGCGCCGATTTGACCACCTGTGGCAGGAACATTTTCCCTTCGCCAAACAGGTCGCCGACCACATTCATGCCGTCCATCAACGGGCCTTCAATCACTTCAATCGGGCGCATTTGCCGTGACTGGCGGGCTGGAAGAGGA                                                                                                                                                                                                                                                    >  1:618405/1‑159                                                                         CCGCCTGTTTCATGACGCGCGCCGATTTGACCACCTGTGGCAGGAACATTTTCCCTTCGCCAAACAGGTCGCCGACCACATTCATGCCGTCCATCAACGGGCCTTCAATCACTTCAATCGGGCGCATTTGCCGTGACTGGCGGGCTGGAAGAGGACGCA                                                                                                                                                                                                                                                <  2:618396/159‑1                                                                                                                                                                                                   CGCATTTGCCGTGACTGGCGGGCTGGAAGAGGACGCCCTGGCTGATGCCTTTGAAGCGCAGCACGATGATTACAACAAAATCATGGTGAAAGCGCTTGCCGACAGTTTAGCCGAAGCCTTTGCGGAGTATCTCCATGAGCGTGTGCGGCAAGTCTAAGGGGGCTATGCGCCGACCGAGAGCCTCAGCTACGAAGAGCTGATCCGCGAAAACTACCAGGGCATCCGTCCGGCACCGGGCTGTCCGGCCTGACCGGCACATCCGGAAAAAGCCcacc  >  2:79466/1‑271                                                                                                                                                                                                   CGCATTTGCCGTGACTGGCGGGCTGGAAGAGGACGCACTGGCTGATGCCTTTGAAGCGCAGCACGATGATTACAACAAAATCATGGTGAAAGCGCTTGCCGACCGTTTAGCCGAAGCCTTTGCGGAGTATCTCCATGAGCGTGTGCGT                                                                                                                                 >  1:292540/1‑148                                                                                                                                                                                                    GCATTTGCCGTGACTGGCGGGCTGGAAGAGGACGCACTGGCTGATGCCTTTGAAGCGCAGCACGATGATTACAACAAAATCATGGTGAAAGCGCTTGCCGACCGTTTAGCCGAAGCCTTTGCGGAGT                                                                                                                                                     <  1:28493/127‑1                                                                                                                                                                                                     CATTTGCCGTGACTGGCGGGCTGGAAGAGGACGCACTGGCTGATGCCTTTGAAGCGCAGCACGATGATTACAACAAAATCATGGTGAAAGCGCTTGCCGACCGTTTAGCCGAAGCCTTTGCG                                                                                                                                                         >  1:625880/1‑122                                                                                                                                                                                                     CATTTGCCGTGACTGGCGGGCTGGAAGAGGACGCACTGG                                                                                                                                                                                                                                            >  2:405198/1‑39                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TGGCGATCACCATCTTGCCGTTGGTTTTGCCCTGCTCTTTGCTGGCTTCAATAAACGGTTCGAGGTAGGCCACCGCCTGTTTCATGACGCGCGCCGATTTGACCACCTGTGGCAGGAACATTTTCCCTTCGCCAAACAGGTCGCCGACCACATTCATGCCGTCCATCAACGGGCCTTCAATCACTTCAATCGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/4216012‑4215816 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcATTTGCCGTGACTGGCGGGCTGGAAGAGGACGCACTGGCTGATGCCTTTGAAGCGCAGCACGATGATTACAACAAAATCATGGTGAAAGCGCTTGCCGACCGTTTAGCCGAAGCCTTTGCGGAGTATCTCCATGAGCGTGTGCGTAAAGTCTACTGGGGCTATGCGCCGAACGAGAACCTCAGCAACGAAGAGCTGATCCGCGAAAACTACCAGGGCATCCGTCCGGCACCGGGCTATCCGGCCTGCCCGGAACATACGGAAAAAGCCACCA  >  CP009273/4216935‑4217206

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.