New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 4273208 =69 (1.800)4 (0.110) 4/302 NT 5.5% coding (1623/1650 nt) actP acetate transporter
?CP009273 4273361 = 70 (1.890)coding (1470/1650 nt) actP acetate transporter

ACCCGGCGCTGTTCTCTATCACCGTGGCATTCCTCGGCATCTGGTTCTTCTCGGCAACCGATAACTCAGCGGAAGGCGCGCGTGAGCGTGAACTGTTCCGCGCGCAGTTTATCCGCTCCCAGACCGGCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/4273338‑4273208
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctttTTCGTGACCAAGGATCTGTACCCAAATCGTCGGGCCGAGGATCATCAGTACTACTGCGGTAATCAGCCCCAGCCAGCCACCCATCATCGCGCCACGCGTGGTCAGTTTCGACCAGTACATAGAAAGCAGAATGATCGGGAAGTTACAGCTCGCCGCGATGGCAAACGCCAGCCCCACCATAAAGGCGATG  >  CP009273/4273361‑4273550
                                                                                                                                                                                                                                                                                                                                 
ACCCGGCGCTGTTCTCTATCACCGTGGCATTCCCCGGCATCTGGTTCTTCTCGGCAACCGATAACTCAGCGGAAGGCGCGCGTGAGCGTGAACTGTTCAGCGCGCAGTTTATCAGCTCCCAGACCGACTTTTTCGTGACCAAGGACCTGTACCCAATTCGGCGGGCCGAGGGTCATCAGTACTACTGCGGTAATCAGCCCAAGCCAGCCACCCATCATACCTCCACACATGCACCGTTTCGCCAAGCACACCAAAACCAGAAAGACCGGGAAG                                                  >  2:648537/1‑273
     GCGCTGTTCTCTATCACCGTGGCATTCCTCGGCATCTGGTTCTTCTCGGCAACCGATAACTCAGCGGAAGGCGCGCGTGAGCGTGAACTGTTCCGCGCGCAGTTTATCCGCTCCCAGACCG                                                                                                                                                                                                     >  2:566498/1‑121
         TGTTCTCTATCACCGTGGCATTCCTCGGCATCTGGTTCTTCTCGGCAACCGATAACTCAGCGGAAGGCGCGCGTGAGCGTGAACTGTTCCGCGCGCAGTTTATCCGCTCCCAGACCGGCTT                                                                                                                                                                                                 <  1:566507/121‑1
                                            TTCTTCTCGGCAACCGATAACTCAGCGGAAGGCGCGCGTGAGCGTGAACTGTTCCGCGCGCAGTTTATCCGCTCCCAGACCGGCTTTTTCGTGACCAAGGATCTGTACCCAAATCGTCGGGCCGAGGATCATCAGTACTACTGCGGTAATCAGCCCAGCCAGCCACCCATCATCGCGCCACGCGTGGTCAGTTTCGAC                                                                                >  1:93259/1‑198
                                               TTCTCGGCAACCGATAACTCAGCGGAAGGCGCGCGTGAGCGTGAACTGTTCCGCGCGCAGTTTATCCGCTCCCAGACCGGCTTTTTCGTGACCAAGGATCTGTACCCAAATCGTCGGGCCGAGGATCATCAGTACTACTGCGGTAATCAGCCCCAGCCAGCCACCCATCATCGCGCCACGCGTGGTCAGTTTCGACCCGTACATAGAAAGCAGAATGATCGGGAAGTTACAGCTCGCCGCGATGGCAAACGCCATCCCCACCCTAAAGCAGATG  >  1:367616/1‑274
                                                TCTCGGCAACCGATAACTCAGCGGAAGGCGCGCGTGAGCGTGAACTGTTCCGCGCGCAGTTTATCCGCTCCCAGACCGGCTTTTTCGTGACCAAGGATCTGTACCCAAATCGTCGGGCCGAGGATCATCAGTACTACTGCGGTAATCAGCCCAGCCAGCCACCCATCATCGCGCCACGCGTGGTCAGTTTCGACCAGT                                                                            <  2:93258/198‑1
                                                                                                                             attTTTTTCGTGACCAAGGATCTGTACCCAAATCGTCGGGCCGAGGATCATCAGTACTACTGCGGTAATCAGCCCCAGCCAGCCACCCATCATCGCGCCACGCGTGGTCAGTTTCGAC                                                                                >  2:378525/4‑118
                                                                                                                               CTTTTTCGTGACCAAGGATCTGTACCCAAATCGTCGGGCCGAGGATCATCAGTACTACTGCGGTAATCAGCCCCAGCCAGCCACCCATCATCGCGCCACGCGTGGTCAGTTTCGACCAGTACATAGAAAGCAGAATGATC                                                        >  2:472245/1‑140
                                                                                                                               CTTTTTCGTGACCAAGGATCTGTACCCAAATCGTCGGGC                                                                                                                                                             <  1:42776/39‑1
                                                                                                                                 TTTTCGTGACCAAGGATCTGTACCCAAATCGTCGGGCCGAGGATCATCAGTACTACTGCGGTAATCAGCCCCAGCCAGCCACCCATCATCGCGCCACGCGTGGTCAGTTTCGACCAGT                                                                            <  1:378531/118‑1
                                                                                                                                 TTTTCGTGACCAAGGATCTGTACCCAAATCGTCGGGCCGAGGATCATCAGTACTACTGCGGTAATCAGCCCCAGCCAGCCACCCATCATCGCGCCACGCG                                                                                              >  1:137515/1‑100
                                                                                                                                                                                                                                                                                                                                 
ACCCGGCGCTGTTCTCTATCACCGTGGCATTCCTCGGCATCTGGTTCTTCTCGGCAACCGATAACTCAGCGGAAGGCGCGCGTGAGCGTGAACTGTTCCGCGCGCAGTTTATCCGCTCCCAGACCGGCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/4273338‑4273208
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctttTTCGTGACCAAGGATCTGTACCCAAATCGTCGGGCCGAGGATCATCAGTACTACTGCGGTAATCAGCCCCAGCCAGCCACCCATCATCGCGCCACGCGTGGTCAGTTTCGACCAGTACATAGAAAGCAGAATGATCGGGAAGTTACAGCTCGCCGCGATGGCAAACGCCAGCCCCACCATAAAGGCGATG  >  CP009273/4273361‑4273550

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.