New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	4369004 =	56 (1.460)	4 (0.110)	4/296	NT	7.2%	coding (180/360 nt)	frdD	fumarate reductase (anaerobic), membrane anchor subunit
	?	CP009273	4369509 =	51 (1.410)					coding (81/396 nt)	frdC	fumarate reductase (anaerobic), membrane anchor subunit

AATCCAAAGCGTTCTGACGAACCGGTATTCTGGGGCCTCTTCGGGGCCGGTGGTATGTGGAGCGCCATCATTGCGCCGGTGATGATCCTGCTGGTGGGTATTCTGCTGCCACTGGGGTTGTTTCCGGGTGATGCGCTGAGCTACGAGCGCGTTCTGGCGTTCGCGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/4369171‑4369004 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgcagCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTGGCCGT  >  CP009273/4369509‑4369563                                                                                                                                                                                                                                 AATCCAAAGCGTTCTGACGAACCGGTATTCTGGGGCCTCTTCGGGGCCGGTGGTATGTGGAGCGCCATCATTGCGCCGGTGATGATCCTGCTGGTGGGTATTCTGCTGCCACTGGGGTTGTTTCCGGGTGATGCGCTGAGCTACGATCGCGTTCTGGCGTTCG                                                              >  1:623741/1‑163     CAAAGCGTTCTGACGAACCGGTATTCTGGGGCCTCTTCGGGGCCGGTGGTATGTGGAGCGCCATCATTGCGCCGGTGATGATCCTGCTGGTGGGTATTCTGCTGCCACTGGGGTTGTTTCCGGGTGATGCGCTGAGCTACGAGCGCGTTCTGGCGTTCGCGCA                                                          <  2:623732/163‑1                                                             AGCGCCATCATTGCGCCGGTGATGATCCTGCTGGTGGGTATTCTGCTGCCACTGGGGTTGTTTCCGGGTGATGCGCTGAGCTACGAGCGCGTTCTGGCGTTCG                                                              >  1:722666/1‑103                                                                 CCATCATTGCGCCGGTGATGATCCTGCTGGTGGGTATTCTGCTGCCACTGGGGTTGTTTCCGGGTGATGCGCTGAGCTACGAGCGCGTTCTGGCGTTCGCGCA                                                          <  2:722656/103‑1                                                                    TCATTGCGCCGGTGATGATCCTGCTGGTGGGTATTCTGCTGCCACTGGGGTTGTTTCCGGGTGATGCGCTGAGCTACGAGCGCGTTCTGGCGTTCG                                                              >  1:269982/1‑96                                                                        TGCGCCGGTGATGATCCTGCTGGTGGGTATTCTGCTGCCACTGGGGTTGTTTCCGGGTGATGCGCTGAGCTACGAGCGCGTTCTGGCGTTCGCGCA                                                          <  2:269977/96‑1                                                                                                         GCTGCCACTGGGGTTGTTTCCGGGTGATGCGCTGAGCTACGAGCGCGTTCTGGCGTT                                                                >  2:60947/1‑57                                                                                                             CCACTGGGGTTGTTTCCGGGTGATGCGCTGAGCTACGAGCGCGTTCTGGCGTTCGCG                                                            <  1:60948/57‑1                                                                                                                                         TGAGCTACGAGCGCGTTCTGGCGTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTGG      >  2:596625/1‑83                                                                                                                                          GAGCTACGAGCGCGTTCTGGCGTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCA                        >  1:84861/1‑64                                                                                                                                             CTACGAGCGCGTTCTGGCGTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTGGCCGT  <  1:596634/83‑1                                                                                                                                              TACGAGCGCGTTCTGGCGTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAG                    <  2:84860/64‑1                                                                                                                                                                                                                                 AATCCAAAGCGTTCTGACGAACCGGTATTCTGGGGCCTCTTCGGGGCCGGTGGTATGTGGAGCGCCATCATTGCGCCGGTGATGATCCTGCTGGTGGGTATTCTGCTGCCACTGGGGTTGTTTCCGGGTGATGCGCTGAGCTACGAGCGCGTTCTGGCGTTCGCGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/4369171‑4369004 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgcagCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTGGCCGT  >  CP009273/4369509‑4369563

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.