| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 73084 = | 52 (1.350) | 5 (0.140) | 4/300 | NT | 9.2% | coding (703/1656 nt) | sgrR | transcriptional DNA‑binding transcriptional activator of sgrS sRNA |
| ? | CP009273 | 73401 = | 49 (1.330) | coding (386/1656 nt) | sgrR | transcriptional DNA‑binding transcriptional activator of sgrS sRNA | |||||
TCTTTTTCCTCGCCCTGTGGACCTTTTAGCATCAGCCCTCCGGCTGGCTCGTCGGCAATTTCCGGCAGAACCCAGACGTTAACTTCGTCGATTAATGCCCGGTAACCGAAGAAGTCATCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGACACAATGTCAGCAATATGCGAATAGAGCGGCAGCGTATTGATTCGTTTTAAAGAGGCGATCACATCGTCCATTTCCAGTTCACGACCATGGTGAAAATGGACTCCTGGACGCAAAAAGAAACGCCAGTGAAGCGGTGAAATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGG > CP009273/72810‑73347 | ttgttttCCNCGCCCTGTTGACCTGTTAGCATCAGCCCTCCGGCTGGCTCGTCGGCAATTTCCGGCAGAACCCAGACGTTACCTTCGTCGATTAATGCCCGGTAACCGAAGAAGTCATCGAATGCCTGAATTTTCAGTTGGTTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCgg < 2:271852/272‑1 (MQ=255) tttttCCTCGCTCTGGGTACCTTTTAGGTTCAGCACTCCGGCTGGATCGTAGGCAATGTCCGGCAGAACCCAGACGTTAACTTCGTCGATTAATGCCCGGTAACCGAAGAAGTCATCGAATGTTTGAATTTTTAGTTGATAGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAAACAGCGGTCCgg < 1:309585/273‑1 (MQ=255) catatgcgcaccctgctcaacaccatgcaggatcgcggctggctgacgtgggaagcggaagtcgggcgcggtaaacgctcgcgtctgacattcctctataccgggctggcgcttcagcaacagcgggcggaagacctgctggagcaggatcgtatcgatcaacgggtgcagttggttggcgacnaagcgactgtgcggcaaatgctggtttctcatctgggccgcagcttccgccaggggcggcacagcctgcgcgtgccctactatcgtccGt < 1:564327‑M1/2‑1 (MQ=255) cggccTGTGGACCTTTTAGCATCAGCCCTCCGGCTGGCTCGTCGGCAATTTCCGGCAGAACCCAGACGTTAACTTCGTCGATTAATGCCCGGTAACCCAAGAAGTCATCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTgaga < 1:389398/272‑1 (MQ=255) tgGACCTTTTAGCATCAGCCCTCCGGCTGGCTCGTCGGCAATTTCCGGCAGAACCCAGACGTTAACTTCGTCGATTAATGCCCGGTAACCGAAGAAGTCATCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACAAGCGGTCCAGTTGCGTGAGAGGGctat > 1:156961/1‑275 (MQ=255) ttttAGCATCAGCCCTCCGGCTGGCTTGTCGGCAGTTTCCGGCAGAACCCAGACGTTAACTTCGTCGATTAATGCCCGGTAACCGAAGAAGTAATCGAATGCCTGCATTTTACGTTGATTGGTGCTGTTGCGAATCAACGCATACGGACAGGTGCCGATGAGATGGCTGGCAAAGTTACTGAGNGTTTCCCANTCGCGCGGCAGGATCAGCGCCGGAACTTGCCCCAACAGTAACGGTAACCAGACGTCCGGTTGCATGAGATGGATATACAACg > 1:478419/1‑275 (MQ=255) tggacgacacgatggatCGTCGGCAAATTCCGGCAGCACCCAGACGTTAACTTCGTCGATTAATGCACGGTAACCGAAGAAGTCATCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAAGCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAGCCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGc < 2:114713/262‑1 (MQ=255) cGGCTGGCTCGTCGGCAATTTCCGGCAGAACCCAGACGTTAACTTCGTCGATTAATGCCCGGTAACCGAAGAAGTCATCTAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGac < 1:715161/275‑1 (MQ=255) ggctCGTCGGCAATTTCCGGCAGAACCCAGACGTTAACTTCGTCGATTAATGCCCGGTAACCGAAGAAGTCATCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGAAATCCAGCGTCCa > 1:114714/1‑257 (MQ=255) ggCAATTTCCGGCTGAACCCATACTTTACCTTCGGTGATTAATGCCCGGTAACCGAAGAAGTCATCGAATGCCTGAATTTTCAGGTGATTGNTGGTGTTTTGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCTCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTACAGGTCGTCGGCGACACAATGTCAGCaa < 1:512387/275‑1 (MQ=255) cccGGTAACCGAAGAAGTCATCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTAGGCGACACAATGTCAGCAATATGCGAATAGAGCGGCAGCGGAATGATTCGGTTTAAAAAAGCg > 1:639020/1‑275 (MQ=255) acGAACACGTCATGCAATGCCGGATTTTTCGGTTGTTTGGTGCTGTTGCGAATCACCGCTTTCGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGACACAATGTCAGCAATATGCGAATAGAGCGGCAGCGTATTGATTCGTTTTAAAGAGGCGATCACAt < 2:720942/273‑1 (MQ=255) tCATCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCANCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGACACAATGTCAGCAATATGCGAATAGAGCGGCAGCGTATTGATTCGTTTTAAAGAGGCGATCACATCGTCCAt > 1:599154/1‑272 (MQ=255) aaTCGAATGACGGCAGTTTCAGTTGAGTGGTGCTGTTGCGAATCAGCGCATACGGACCGGTGGCGAGGGGATGGCTGGCCAAGTTACTGAGCGTTTCCCAGTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGACACAATGTCAGCAATATGCGAATAGAGCGGCAGCGTATTGATTCGTTTTAAAGAGGCGATCACATCGTCCATTTc < 2:614349/273‑1 (MQ=255) aTCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGAGACACAATGTCAGCAATATGCGAATAGAGCGGCAGCGGATTGATTCGTTTTAAAGAGGCGATCACATCGTCCAATTccc > 1:720952/1‑274 (MQ=255) ccTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCACAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGata > 2:262623/1‑167 (MQ=255) aaTTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCa < 1:262628/167‑1 (MQ=255) tgtcggTTGATTGGTCCTGTTGCGAAACACCGCTTCAGGACCGGTGCCGGTTGTATGGCTTGCAAAGTTGTTGAGGGTTTCCAAGTCGCGCGGCAGGATCGTCGCCGGAACTTGTCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGATATGGATATCCAGCGTCCAGGGCTTCGGCGACACAATGTCAGCAATATGCGAATAGAGCGGCAGCGTATTGATTCGTTTTAAAGAGGCGATCACATCGTCCATTTCCAGTTCACGACCATGGt < 2:639011/270‑1 (MQ=255) cTGTTGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGACACAATGTCAGCAATATGCGAATAGAGc > 1:682509/1‑195 (MQ=255) tcgtatcgatcaactggtgcagttggttggctacaaagcgactctgcggcaaatgctggtttctcatctgggccgcagcttctgccagtggcggcccatccttcgcgtgctctactatcgtccGTTGCg > 1:451251‑M1/124‑129 (MQ=255) tGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGACACAATGTCAGCAATATGCGAATAGAGCGGCa < 2:682500/195‑1 (MQ=255) atcaactggtgcagttggttggcgacaaagcgactgtgcggcaaatgctggtttctcatctgggccgcagcttccgccaggggcggcacatcctgcgcgtgctctactatcgtccGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGACACAATGTCAGCAATATGCGAATAGAGCGGCAGCGTATTGATTCGTTTTAAAGAGGCGATc < 2:81578‑M1/101‑1 (MQ=255) aCCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCgg < 1:291738/116‑1 (MQ=255) actggtgcagttggttggcgacaaagcgactgtgcggcaaatgctggtttctcatctgggccgcagcttccgccaggggcggcacatcctgcgcgtgctctactatcgtccGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGACACAATGTCAGCAATATGCGAATAGAGCGGCAGCGTATTGATTCGTTTTAAAGAGGCGATCACAt > 1:81579‑M1/112‑216 (MQ=255) actggtgcagttggttggcgacaaagcgactgtgcggcaaatgctggtttctcatctgggccgcagcgtccgccaggggcggcacatcctgcgcgtgctctactatcgtccGTTGCGTGAGATGGATATCCAGCGTACAGGGCGTCGGCGACACAATGTCAGCAATATGCg > 1:484440‑M1/112‑171 (MQ=255) gTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCa > 2:404494/1‑128 (MQ=255) gTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGAGACAATGTCAGCAATATGCGAATAGAGCGGCAGCGTATTGATTCGTTTTAAAGAGCCGATCACATCGTCCATTTCCAGTTCACGACCATGGTGAAAATGGACTCCTGGACGCAAAAAGAAACGCCAGTGAAGCgg > 1:680632/1‑275 (MQ=255) gTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGACACAATGt > 2:600690/1‑148 (MQ=255) gTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGACACAATGTCAGCAATATGCGAATAGAGCGGCAGCGTATTGATTCGTTTTAAAGAGGCGATCACATCGTCCATTTCCAGTTCACGACCATGGTGAAAATGGACTCCTGGACGCAAAAAGAAAAGCAAGTGAAGCg > 1:323913/1‑274 (MQ=255) tGCCGGTGGGTTGTCGGGCAAACTTACTGGGGGAGGCCCATTCGCGCGGCAGGATCATTGCCGGAACTTGCTCAAGCAGTAACGGTAACCAGCGGTCCGGCTGCGCGAGATGGATATGGAGCGTCTAGGGCGTCGACGACACAATGTCAGCAATATGCGAAGAGAGCGGCAGCGTATTGATTCGTTTTAAAGAGGCGATAACAATATCCAGTGACAGTTACAGACCAGGGGAAAAAGGGACTCCCGGAGGGAAAAAGAAACGcagagacaacagt > 2:691406/1‑263 (MQ=255) tGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGACACAATGTCAGCAATATGCGAATAGAGCGGCAGCGTATTGATTCGTTTTAAAGAGGCGATCACATTGTCCATTTCCAGTTCACGACCATGGTAAAAATGGACTCCTGGACGCAAAAAGAAAGGCAAGTGAAACgtt > 2:684032/1‑273 (MQ=255) cgctgggatggCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGACACAATGTCAGc < 1:600699/145‑1 (MQ=255) cGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGat < 1:610429/112‑1 (MQ=255) cGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGc < 1:404501/128‑1 (MQ=255) atggCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGACACAATGTCAGCAATATGCGAATAGAGCGGCAGCGTATTGATTCGTTTTAAAGAGGCGATCACATCGTCCATTTCCAGTTCACGACCATGGTGAAAATGGACTCCTGGACGCAAAAAGAAACGCCAGTGAAGCGGTGAAATTtgcg > 1:251541/1‑274 (MQ=255) agggctggaAAAGTTAGTGAGGGTTTCCCATTCGGGCGGCAGGATCAGCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGAGGGATATCCAGCGTCCAGGGCGTCGGCGACACAATGTCAGCAATATGCGAATAGAGCGGCAGCGTAGTGATTCGTTTTAAAGAGGCGATCACATCGTCCATTTCCAGTTCACGACCATGGTGAAAATGGACTCCTGGACGCAAAAAGAAACGCCAGTGAAGCGGTGAAATTtgc < 1:200036/272‑1 (MQ=255) tggcAAAGTTCCTTGGGGTTTCCCATTGGCGCGGCAGGATCATCGCCGTAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATACCCAGCGTCCAGGGCGTCGGCGACACAATGTCAGCAATATGCGATTAGAGCGGCAGCGTATTGATTCGTTTTAAAGAGGCGATCACATCGTCCATGTCCAGTTCACGACCATGGTGAAAATGGACTCCTGGACGCAAAAAGAAACGCCAGTGAAGCGGTGAAATTTGCTGCCa < 1:197068/274‑1 (MQ=255) tggcAAAGTTACTGAGGGTTTCCCATTAGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAAGCAGCGGTCCGGATGCGTGAGTAGGATATCCAGCGTCCAGGGCGTCGGCGACACAATGTCAGCAATATGCGAATCGTGCGGCAGCGTATTGCTTCGTTTTAACTGAGCGATCGCATGGTCCATTTCCATTTCACGACCATGGTGAAAATGGACTCCTGGACGCAAAAAGAAACGCAAGGGAAGAGGTCAAAttggaggagag > 2:197065/1‑266 (MQ=255) cAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGACACAATGTCAGCAATATGCGAATAGAGCGGCAGCGTATTGATTCGTTTTAAAGAGGCGATCACATCGTCCATTTCCAGTTCACGACCATGGTGAAAATGGACTCCTGGACGCAAAAAGAAACGCAAGTGAAGCGGTGAAATTTGCTGCAAgg > 1:200782/1‑272 (MQ=255) gcaaatgctggtttctcatctgggccgcagcttccgccaggggcggcacatcctgcgcgtgctctactatcgtccGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGACACAATGTCAGCAata < 1:526252‑M1/56‑1 (MQ=255) tGAGGGTTTCCCATTCGCGCGGCAGGAACATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGACACAATGTCAGCAATATGCGAATAGAGCGGCAGCGTATTGATTCGTTTTAAAGAGGCGATCACATCGTCCATTTCCAGTTCACGACCATGGTGAAAATGGACTCCTGGACGCAAAAAGAAACGCCAGTGAAGCGGTGAAATTTGCTGCCAGTGGTGGGCGAt > 1:409833/1‑274 (MQ=255) atgctggtttctcatctgggccgcagcttccgccaggggcggcacatcctgcgcgtgctctactatcgtccGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGACACAATGTCAGCAATATGCg > 2:526244‑M1/72‑131 (MQ=255) gctggtttctcatctgggccgcagcttccgccaggggcggcacatcctgcgcgtgctctactatcgtccGtt < 2:121083‑M1/3‑1 (MQ=255) tttCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGAt > 1:449677/1‑78 (MQ=255) tttCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGTCGTCGGCGACACAATGTCAGCAATATGCGAATAGAGCGGCAGCGTATTGATTCGTTTTAAAGAGGCGATCACATCGTCAATTTCCAGTTCACGACCATGGTGAAAATGGACTCCTGGACGCAAAAAGAAATGACCGTGAAACGGAGAAATGTGCTGCAGGGGGTGTGCGAAGtcttct > 2:209514/1‑275 (MQ=255) gtttctcatctgggccgcagcttccgccaggggcggcacatcctgcgcgtgctctactatcgtccGTTGCGt > 1:121084‑M1/66‑72 (MQ=255) ccATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGat < 2:449670/78‑1 (MQ=255) gcgcgGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGACACAATGTCAGCAATATGCGAATAGAGCGGCAGCGTATTGATTCGTTTTAAAGAGGCGATCACATCGTCCATTTCCAGTTCACGACCATGGTGAAAATGGACTCCTGGACGCAAAAAGAAACGCCAGTGATGCGGTGAAATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTcc < 1:684041/274‑1 (MQ=255) cgcgGCAGGATCATCGCCGGAACTTGCCCCAGCATTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCg > 1:470429/1‑88 (MQ=255) cgcgGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGACACAATGTCAGCAATATGCGAATAGAGCGGCAGCGTATTGATTCGTTTTAAAGAGGCGATCACATCGTCCATTTCCAGTTCACGACCATGGTGaa > 2:313005/1‑190 (MQ=255) gCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCgg < 2:470422/88‑1 (MQ=255) gCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGACACAATGTCAGCAATATGCGAATAGAGCGGCAGCGTATTGATTCGTTTTAAAGAGGCGATCACATCGTCCATTTCCAGTTCACGACCATGGTGAAAATg < 1:313011/190‑1 (MQ=255) cAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGACACAATGTCAGCAATATGCGAATAGAGCGGCAGCGTATTGATTCGTTTTAAAGAGGCGATCACATCGTCCATTTCCAGTTCACGACCATGGTGAAAATGGACTCCTGGACGCAAAAAGAAACGACAGTGAAACGGTGAAATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTGCCCCAtttt > 2:717160/1‑275 (MQ=255) ggatgagggCCGAAACTAGACCCGTCGGTATCGGTAACAAGGGGTCGGGTGGCGGTAGATGGAGATCCAGCGGCCAGGGCGGCGGCAGAACAAAGTCAGAAATATGCGAATAGAGCGGCAGCGTATTGATTAGTTTTAAAGAGGCGAACACATCGTCCATTTCAAGTGCACGACCATGGTGAAAATGGACTCCTGGACTCAAAAAGAAACGCCAGTGAAGCGGTGAAATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTcc < 2:156958/267‑1 (MQ=255) gCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCg > 1:357678/1‑63 (MQ=255) ccccAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGACACAATGTCAGCAATATGCGAATAGAGc > 2:370647/1‑97 (MQ=255) cagcagTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCgg < 2:357672/63‑1 (MQ=255) agcagTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGACACAATGTCAGCAATATGCGAATAGAGCGGCa < 1:370653/97‑1 (MQ=255) tAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGACACAATGTCAGCAATATGCGAATAGAGCGGCAGCGTATTGATTCGTTTTAAAGAGGCGATCACATCGTCCATTTCCAGTTCACGACCATGGTGAAAATGGACTCCTGGACGCAAAAAGAAACGCCAGTGAAGCGGTGAAATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCCTTTATGCTCGTTATCGAACTTAAGa > 2:319459/1‑275 (MQ=255) atccAGCGGTCCGGTTGCGTGATATGGATATCCAGCGTCCAGGGCGTCGGCGACACAATGTCAGCAATATGCGAATAGAGCGGCAGCGTATTGATTCGTTTGAAAGAGGCGATCACATCGTCCATTTCCAGTTCACGACCATGGTGAAAATGGACTCCTGGACGCAAAAAGAAACGCCAGTGAAGCGGTGAAATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCg < 1:209518/273‑1 (MQ=255) aaCCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGACACAATGTCAGCAATATGCGAATAGAGc > 1:355497/1‑81 (MQ=255) accacctgggcGGTTTCGTGAGATTGATATCCAGCGTCCAGGGCGTAGGCGACACAATGTCAGCAATATGCGAATAGAGCGGCAGCGTATTGATTCGTTTTAACTAGGCGATCACTTCGTCCATTTCCAGTGCGCGACCATGGTGAAAATGGACTCATGGACGCAGAAAGAAGCGCCAGTGAAGCGGTGAAATTTGCTGCCAGTGATGGGCGGTGTCTGCTTCCAGTTCCCCATTGTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCgg < 2:251536/265‑1 (MQ=255) tacaggTCCGGTTGAGTGAGAGGGAGATCCAGCGGCCAGGGAGTCGGCGACACAATGTCAGCAATATGCGAATAGAGCGGCAGCGTATTGATTCGTTTTAAAGAGGCGATCACATCGTCCATTTCCAGTTCACGACCATGGTGAAAATGGACTCCTGGACGCAAAAAGAAACGCCAGTGAAGCGGTGAAATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCggg < 2:178858/270‑1 (MQ=255) aGCTGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGACACAATGTCAGCAATATGCGAATAGAGCGGCa < 2:355491/81‑1 (MQ=255) gCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGACACAATGTCAGCAATATGCGAAt > 1:565999/1‑71 (MQ=255) tCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGACACAATGTCa > 1:175337/1‑54 (MQ=255) tCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGACACAATGTCAGCAATATGCGAATagag < 2:565990/71‑1 (MQ=255) tCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGACACAATGTCAGCAATATGCGAATAGAGCGGCAGCGTATTGATTCGTTTTAAAGAGGCGATCACATCGTCCATTTCCAGTTCACGACCATGGTGAAAATGGACTCCTGGACGCAAAAAGAAACGCCAGTGAAGCGGTGAAATTTGCTGCCa > 2:339106/1‑194 (MQ=255) GTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGACACAATGTCAGCaa > 2:175334‑M1/1‑54 (MQ=255) GTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGACACAATGTCAGCAATATGCGAATAGAGCGGCAGCGTATTGATTCGTTTTAAAGAGGCGATCACATCGTCCATTTCCAGTTCACGACCATGGTGAAAATGGACTCCTGGACGCAAAAAGAAACGCCAGTGAAGCGGTGAAATTTGCTGCCAgtgg > 1:339112‑M1/1‑194 (MQ=255) | TCTTTTTCCTCGCCCTGTGGACCTTTTAGCATCAGCCCTCCGGCTGGCTCGTCGGCAATTTCCGGCAGAACCCAGACGTTAACTTCGTCGATTAATGCCCGGTAACCGAAGAAGTCATCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGACACAATGTCAGCAATATGCGAATAGAGCGGCAGCGTATTGATTCGTTTTAAAGAGGCGATCACATCGTCCATTTCCAGTTCACGACCATGGTGAAAATGGACTCCTGGACGCAAAAAGAAACGCCAGTGAAGCGGTGAAATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGTTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGG > CP009273/72810‑73347 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |