New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 112279	38 (0.990)	5 (0.130)	4/308	NT	12.8%	coding (1308/1386 nt)	hofB	T2SE secretion family protein; P‑loop ATPase superfamily protein
	?	CP009273	= 112436	31 (0.820)					coding (1151/1386 nt)	hofB	T2SE secretion family protein; P‑loop ATPase superfamily protein

CCAGTTGATGAATGACTTCCGCGCTTTTATCTCCTCGCCACTGCGCAGAATTGATGGCGATTCGCTTCAGGCTTAGTGGGGTAACCATCTGTTGCTGTAGTGCCATAAGCAGTAAAGTACGGCTCTCTGCCCATAGCATCCCATCTTGCGCATTGCCGTCGCCGGTTATGCCATGCCAGCGCCAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTTGCTGCCGGCGACAATGT  >  CP009273/112010‑112519                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                 ccAGTTGATGAATGACTTCCGCGCTTTTATCTCCTCGCCACTGCGCAGAATTGATGGCGATTCGCTTCAGGCTTAGTGGGGTAACCATCTGTTGCTGTAGTGCCATAAGCAGTAAAGTACGGCTCTCTGCCCATAGCATCCCATCTTGCGCATTGCCGTCGCCGGTTATGCCATGCCAGCGCCAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGAAGCCGtttt                                                                                                                                                                                                                                              >  1:119506/1‑274 (MQ=255)     ttcgtgatggaattCCGCGCTTTTATCGCCGCGCCACTGCGCAGAATTGATGGCGATTCGCTTCAGGCTTAGTGTGGTAACCATCTGTTGCTGTAGTGCCATAAGCAGTAAAGTACGGCTCTCTGCCCATCGCATCCCATCTTGCGCATTGCCGTCGCCGGTTATGCCATGCCAGCGCCAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCaaa                                                                                                                                                                                                                                          <  2:119505/262‑1 (MQ=255)                                            cgcAGAATTGATGGCGATTCGCTTCAGGCTTAGTGGGGTAACCATCTGTTGCTGTAGTGCCATAAGCAGTAAAGTACGGCTCTCTGCCCATAGCATCCCATCTTGCGCATTGCCGTCGCCGGTTATGCCATGCCAGCGCCAGAGTTGCTTACTCGCCATGAGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGGGCGTTTCCAg                                                                                                                                                                                                   >  1:239535/1‑274 (MQ=255)                                                                                 gTAACCATCTGTTGCTGTAGTGCCATAAGCAGTGAAGTACGGCTCTCTGCCCATAGCATCACATCTTGCGCATTGCCGTCGCCGGTTCTGCCCTGCCAGCGCCAGAGTTGCTTATTCGCCATGCGGCATCTCCAGTCTGCGCATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTCCGGCCAGCCACACGCCTTGCAAAAGCGTAAGCATACACCCCAGTCTTGCTTGCTTTTGCGGCGCTTCACCTGCGTTATTAGCGGCACTaaagccgnnnt                                                                                                                                                             >  2:176470/1‑266 (MQ=255)                                                                                           gTTGCTGTAGTGCCATAAGCAGTAAAGTACGGCTCTCTGCCCATAGCATCCCATCTTGCGCATTGCCGTCGCCGGTTATGCCATGCCAGCGCCAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTNAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAATGACAgg                                                                                                                                                      >  1:618102/1‑272 (MQ=255)                                                                                            ttgagttattGCCACAACCACTACACTCCGGCACTCGGCCCATAGCATCCCTCCTTGCGCATTGCCGTGGCCGGTTATGCCCTTCCAGAGCCAGAGTGGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGtt                                                                                                                                                  <  2:618093/266‑1 (MQ=255)                                                                                                        cATAAGCAGTAAAGTACGGCTCTCTGCCCATAGCATCCCATCTTGCGCATTGCCGTCGCCGGTTATGCCATGCCAGCGCCAGAGTTGCTTACTCGCCGTGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACt                                                                                                                                      <  1:378321/275‑1 (MQ=255)                                                                                                            aGCAGTAAAGTACGGCTCTCTGCCCATAGCATCCCATCTTGCGCATTGCCGTCGCCGGTTATGCCATGCCAGCGCCAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGCCGTGCGTGCGTTTCCAGCGATTCCACGTCGGTATTAGCAGAAATAAGCTGACGAATGACCGGCGTTATATCCAGAACTTCa                                                                                                                                   >  2:29883/1‑274 (MQ=255)                                                                                                                gTAAAGTACGGCTCTCTGCCCATAGCATCCCATCTTGCGCATTGCCGTCGCCGGTTATGCCATGCCAGCGCCAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCa                                                                                                                                           <  1:29883/262‑1 (MQ=255)                                                                                                                              tctGCCCATAGCATCCCATCTCGCGCATTGCCGTCGCCGGTTATGCCATGCCAGCGCCAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATgg                                                                                                                                              >  1:138362/1‑245 (MQ=255)                                                                                                                                tGCCCATCGCCTCCCATCTTGCGCATTGCCGTCGCCGGTTATGCCATGCCCGCGCCTGAGTTGCTTACGCGCCAGGCGGCACCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAGTAAGGCCGTACGACCAt                                                                                                                <  1:193139/273‑1 (MQ=255)                                                                                                                                tGCCCATAGCATCCCATCTTGCGCATTGCCGTCGCCGGTTATGCCATGCCAGCGCCAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAACGCGTACGCATACCCGCCTGTCGAGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAACGGAAATAAGCTGACGAATGACCGGCGATCTGGGCAGAACTTCCAATAAGGCCGTACGAcctaaa                                                                                                              >  2:193136/1‑271 (MQ=255)                                                                                                                                tGCCCATAGCATCCCATCTTGCGCATTGCCGTCGCCGGTTATGCCATGCCAGCGCCAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGAACGACCATaa                                                                                                              >  1:212316/1‑275 (MQ=255)                                                                                                                                          aTCCCATCTTGCGCATTGCCGTCGCCGGTTATGCCATGCCAGCGCCAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGgttgtgtacattgctaccacggtttttatggtagtacggccttatttgaagttctgcccataacgccggtcattcgtcagcttatttccgctaataccgacgttgactcgctggaacagcacgcacgacaggcggggagtcg                                                                                                    >  2:718965‑M1/1‑133 (MQ=255)                                                                                                                                           tCCCATCTTGAGCATTGCCGTCGCCGGTAATGCCAGGCCAGCGCCAGAGTGGCTTACTCGCCATGCGGCATCCCCAGTACGCGTATTAACTCTTCAAAGGTGGTGAAGCCTTGCTCTAAGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTa                                                                                                   <  1:176473/275‑1 (MQ=255)                                                                                                                                             ccATCGTGCGCATTGCCGTCGCCGGTTATGCCATGCCAGCGCCAGAGTTGCTTACTCCCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGgttgtgtacattgctaccacggtttttatggtcgtacggccttatttgaagttctgcccataacgccggtcattcgtcagcttatttccgctaataccgacgttgaatcgctggaaacgcacgcacgacaggcgggtatgcgtac                                                                                                 <  1:454522‑M1/275‑146 (MQ=255)                                                                                                                                              aatatggcaacttGCAGGCGCCTGTTATGCCCTGCCACGGCCAGATTTGCTTAATCGCCATGCGGCATCCCCAGGACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCa                                                                                                <  2:212312/264‑1 (MQ=255)                                                                                                                                               aTCTTGCGCATTGCCTTCGCCGGTTATGCCATGCCAGCGCCAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGgttgtgtacattgctaccacggtttttatggtcgtacggccttatttgaagttctgcccataacgccggtcattcgtcagcttatttccgctaataccgacgttgaatcgctggaaacgcacgcacgacaggcgggtatgcgtacgc                                                                                               <  1:718975‑M1/275‑148 (MQ=255)                                                                                                                                                    gcgcATTGCCGTCGCCGGTTATGCCATGCCAGCGCCAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGgttgtgtacattgctaccacggtttttatggtcgtacggccttattgtaagttctgcccataacgccggtcattcgtcagcttatttccgctaataccgacgttgaatcgctggaaaagaacgccagacatgcgggtaatcttacgcttt                                                                                            >  2:134770‑M1/1‑123 (MQ=255)                                                                                                                                                     cgcATTGCCGTCGCCGTTTATGCCATGCTAGCGCCAGAGTTGCTGACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGNATTAGCGGAAATAAGCTGACGaa                                                                                                                                                             >  1:538591/1‑207 (MQ=255)                                                                                                                                                        aTTGCCGTCGCCGGTTATGCCATGCCAGCGCCAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGgttgtgtacattgctaccacggtttttatggtcgtacggccttatttgaagttctgcccataacgccggtcattcgtcagcttatttccgctaataccgacgttgaatcgctggaaacgcacgcacgacaggcgggtatgcgtacgc                                                                                               <  1:134771‑M1/266‑148 (MQ=255)                                                                                                                                                                                     gcCAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCACCGTCGGTATTAGCGGAACTAAGCTGACGAATGCCCGGCGTTATGGGCAGACCTTCAAATAAGGCCGTACGACCATAAAACACGGGGTAGCACGGACCACCACCGGGTGCCTGCCAGTGGGGCAgcggcg                                                          >  2:292832/1‑274 (MQ=255)                                                                                                                                                                                                      gCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACg                                                                                                                                                                                                                                 >  2:227718/1‑90 (MQ=255)                                                                                                                                                                                                          tGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATa                                                                                                                                                                                                                             <  1:227723/90‑1 (MQ=255)                                                                                                                                                                                                                       gTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGaa                                                                                                                                                             >  2:364969/1‑141 (MQ=255)                                                                                                                                                                                                                       gTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGt                                                                                                    >  2:570140/1‑198 (MQ=255)                                                                                                                                                                                                                           gcgGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTCCGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAATGAc                                                                                                                                                         <  1:364975/141‑1 (MQ=255)                                                                                                                                                                                                                           gcgGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCa                                                                                                <  1:570149/198‑1 (MQ=255)                                                                                                                                                                                                                             ggATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCaaa                                                                                                                                                                                                                                          >  2:515681/1‑58 (MQ=255)                                                                                                                                                                                                                             ggATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCg                                                                                                                                                                                                                         >  2:221427/1‑75 (MQ=255)                                                                                                                                                                                                                                 tAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTg                                                                                                                                                                                                                     <  1:221432/75‑1 (MQ=255)                                                                                                                                                                                                                                       ttCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCTTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTATGGAATGTGGATGGGCTCCCCTtgctgc              >  1:386921/1‑268 (MQ=255)                                                                                                                                                                                                                                         cAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAAt                                    >  1:143299/1‑244 (MQ=255)                                                                                                                                                                                                                                           aaGGTTGTTAAGCCTTGCGTTACGGCCAGGCAGCCGTTTTTAAAAAGTGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGTTAGTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTTGCTGCCGGCGACAAt    <  1:342530/274‑1 (MQ=255)                                                                                                                                                                                                                                            aGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCATCTAAGGCCGTANGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTTGCTGCCGGCGACAAtgt  >  1:666358/1‑275 (MQ=255)                                                                                                                                                                                                                                                 gtTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACTACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAgcg                                                             >  1:96268/1‑211 (MQ=255)                                                                                                                                                                                                                                                 gtTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAgc                                                              >  1:608181/1‑210 (MQ=255)                                                                                                                                                                                                                                                 gtTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAgc                                                              >  1:48045/1‑210 (MQ=255)                                                                                                                                                                                                                                                     aGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACTACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGa                                                         <  2:96267/211‑1 (MQ=255)                                                                                                                                                                                                                                                     aGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAgcggcg                                                          <  2:608172/210‑1 (MQ=255)                                                                                                                                                                                                                                                          tGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGt                                                                                                    >  2:122696/1‑163 (MQ=255)                                                                                                                                                                                                                                                              ctACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCa                                                                                                <  1:122697/163‑1 (MQ=255)                                                                                                                                                                                                                                                                   gCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTCTTAGCGGAAATAAGCTGACGCATGACCGGCGTTATGGGCAGAACTCCAAATAAGGCCGTACGACCATaa                                                                                                              >  1:616484/1‑144 (MQ=255)                                                                                                                                                                                                                                                                       ggCAGCCGGTTTCAAAAAGCGTACGCGTACCCGCCTGTCGTGCGTGCGGTTCCAGCGATTCAACGTCGGTAGTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAacac                                                                                                          <  2:616475/144‑1 (MQ=255)                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                 CCAGTTGATGAATGACTTCCGCGCTTTTATCTCCTCGCCACTGCGCAGAATTGATGGCGATTCGCTTCAGGCTTAGTGGGGTAACCATCTGTTGCTGTAGTGCCATAAGCAGTAAAGTACGGCTCTCTGCCCATAGCATCCCATCTTGCGCATTGCCGTCGCCGGTTATGCCATGCCAGCGCCAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTTGCTGCCGGCGACAATGT  >  CP009273/112010‑112519

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.