New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	147575 =	73 (1.900)	4 (0.110)	4/296	NT	6.2%	coding (512/597 nt)	yadK	putative fimbrial‑like adhesin protein
	?	CP009273	147808 =	52 (1.440)					coding (279/597 nt)	yadK	putative fimbrial‑like adhesin protein

TGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTACAACAAGAATACAGTGCTAAAAAAAGAATGTACCTGAAGATAGTCTTCATTTTTACTCCAATGTTTCTTTATTGTTATGGTTTGCGCTGTTTTTGTTTGTTATTCGTAGTAAATATCCACTAACACATGGCTCATAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAACATTGAATGTATTCGCCGAATCCTGAGTAGAAAATATAACTACTCCTACATTACTTGCTCCTGACGAAATTTCATTAGCAAATATTTGCCTAGAGCCAGCAGCCATGACACCGCTAAGGGCTCTAAAATCAATATGTAACTGATTTAGCACATCGCCAGTTCCCTGTAATGCACAGTCGGATACAGTGATA  >  CP009273/147307‑147847                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                                 tcaacgtaagctgataaagagaagaattatgtttctgtcattactgttttgcatcgcctgtccagccattgctggacaggatattgaccttgttgccaatgtaaaaaacagcacctgcaaaagcggaatcagtaaccagggtaatatttatcttggcgtcgttgaggtggtatatttttcaggnaatgtgactgctgaaagatatcaacaaggtggaaaagagttcactatcactgtatcggactattcattacagagaactgacgatATGATaa                                                                                                                                                                                                                                                                            <  1:494724‑M1/7‑1 (MQ=255)                     tCGATAGTTATCAAGTCCGGCATTATTTCCCACAAGAAGCCTGGTATATGCCATGACGGTAGTACAACAAGAATACAGTGCTAACAATAGACTGTCCCTGAAGTTAGACTTGTTCTTTATTCTATTGACTCTTTATTGTGATGGTTAGCGATGTTTTTGTTTGTTATTCGTAGTACATATCCACTAAAAAATGGCTCATAAGTTGACCAGATGTAACACACAATTCAGAATCGATTTTTTGAATACGGTAGCAAACTTTTAAGTATGAACCaaca                                                                                                                                                                                                                                                        >  2:212485/1‑272 (MQ=255)                                      cTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTACAACAAGAATACAGTGCTAAAAAAAGAATGTACCTGAAGATAGTCTTCATTTTTACTCCAATGTTTCTTTATTGTTATGGTTTGCGCTGTTTTTGTTTGTTATTCGTAGTAAATATCCACTAACACATGGCTCATAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCAGACATTAc                                                                                                                                                                                                                                       >  1:70125/1‑275 (MQ=255)                                       ttcATTATTTCCCACAATATAAATTGTATATGCATTGACTGTATTACAACAAGAATACAGTGCTAAAAAAAGAATGTACCTGAAGATTGTCTTCATTTTTACTCCAATGTTTCTTTATTGTTATTGTTTGCGCTGTTTTTGTTTGTTATTCGTAGTAAATATCCACTAACACATGGCTCATAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTAc                                                                                                                                                                                                                                       <  1:212489/272‑1 (MQ=255)                                                                           gactgTATTACAACAAGAATACAGTGCTAAAAAAAGAATGTACCTGAAGATAGTCTTCATTTTTACTCCAATGTTTCTTTATTGTTATGGTTTGCGCTGTTTTTGTTTGTTATTCGTAGTAAATATCCACTAACACATGGCTCATAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGAGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAg                                                                                                                                                                                                   >  1:713429/1‑274 (MQ=255)                                                                            actgTATTACAACAAGAATACAGTGCTAGAAAAAGAATGTACCTGAAGATAGTCTTCATTTTTACTCCAATGTTTCTTTATTGTTATGGTTTGCGCTGTTTTTGTTTGTTATTCGTAGTAAATATCCACTAACACATGGCTCATAAGTTGACCAGATGTAACAGTCAATGCAGGATCGATTTTNTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATAAGAAATTACTGGATAAACGGAACGAGATCCGCCTAAAGCATTAAGaa                                                                                                                                                                                                 >  1:550297/1‑275 (MQ=255)                                                                            actgTATTACAACAAGAATACAGACCTACAAAAAGAATGTACCTGAAGATAGTCTTCATTTTTACTCCAATGTTTCTTTATTGTTATGGTTTGCGCTGTTTTTGTTTGTTATTCGTAGTAAATATCCACTAACACATGGCTCATAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTNTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTaaaa                                                                                                                                                                                                  >  1:489272/1‑272 (MQ=255)                                                                               atATTACAACAAGAATACAGTGCTAAAAAAAGAATGTACCTGAAGATAGTCTTCATTTTTACTCCAATGTTTCTTTATTGTTATGGTTTTCGCTGTTTTTGTTTGTTATTCGTAGTAAATATCCACTAACACATGGCTCATAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTa                                                                                                                                                                                                     <  2:713419/267‑1 (MQ=255)                                                                                      aacaaGAATACAGTGCTAAAAAAAGAATGTACCTGAAGATAGTCTTCATTTTTACTCCAATGTTTCTTTATTGTTATGGTTTGCGCTGTTTTTGTTTGTTATTCGTAGTAAATATCCACTAACACATGGCTCATAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAATCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGAACCGCCTGAAGCATTAAGAACATTgta                                                                                                                                                                                          >  2:681968/1‑270 (MQ=255)                                                                                        caaGAATACAGTGCTAAAAAAAGAATGTACCTGAAGATAGTCTTCATTTTTACTCCAATGTTTCTTTATTGTTATGGTTTGCGCTGTTTTTGTTTGTTATTCGTAGTAAATATCCACTAACACATGGCTCATAAGTTGACCAGATGTAACACTCAATGCAGGATAGATTTTTTGCATTCGGGTGCTAAATTTACAGGAGGACCAATTCATGTCATCCGACATAACTGGATAAACGCACCGAGATCGCCCTGAAGCCTTAAGAACATTGAATGTaa                                                                                                                                                                                     >  2:24430/1‑274 (MQ=255)                                                                                          aGAATACAGTGCTAAAAAAAGAATGTACCTGAAGATAGTCTTCATTTTTACTCCAATGTTTCTTTATTGTTATGGTTTGCGCTGTTTTTGTTTGTTATTCGTAGTAAATATCCACTAACACATGGCTCATAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGAAATAAGAAAACAGAATGAATTc                                                                                                                                                                                   >  2:128031/1‑275 (MQ=255)                                                                                                   tGCTAAAAAAAGAATGTACCTGAAGATAGTCTTCATTTTTACTCCAATGTTTCTTTATTGTTATGGTTTGCGCTGTTTTTGTTTGTTATTCGTAGTAAATATCCACTAACACATGGCTCATAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATACATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAACATTGAATGTATTCGCCGAATcc                                                                                                                                                                          >  1:720351/1‑275 (MQ=255)                                                                                                    tcTACAAAAAANATGTACCTTAAGATAGTGTTAATTTTTACTCCAATGTTTCTTTATTGTTATGGTTTGCGCTGTTTTTGTTTGTTATTCGTAGTAAATATCCACTAACACATGGCTCATAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGATCCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAGCATTGAATGTATTCGCCGAATCCt                                                                                                                                                                         <  2:70124/274‑1 (MQ=255)                                                                                                         aaaaaTAATGTATTTGAAGTTTGTATTTATTTTTTCTCCTATGTTTATTTATTGTTATGGTTTGCTCTGTTTTTGTTTGTTATTCGTAGTAAATATCCACTCACACATGGCTCATAAGTTTACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATGCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGATCATTGAATGTATTCGCCGATTCCTGAGTa                                                                                                                                                                    <  2:550288/275‑1 (MQ=255)                                                                                                            aaGAATGTACCTGAAGATAGTCTTCATTTTTACTCCAATGTTTCTTTATTGTTATGGTTTGCGCTGTTTTTGTTTGTTATTCGTAGTAAATATCCACTAACACATGGCTCATAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTc                                                                                                                                                                                                                                                                       <  2:596128/173‑1 (MQ=255)                                                                                                             aGAATGTACCTGAAGATAGTCTTCATTTTTACTCCAATGTTTCTTTATTGTTATGGTTTGCGCTGTTTTTGTTTGTTATTCGTAGTAAATATCCACTAACACATGGCTCATAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCCGGATGAACCATTCATGTCATCCGACATTACTTTATAAACGGAACGAGATCAGCCTGAAGCATTAAAAACATTGAATGTATTCACCGAAACCTGAAGAGaaa                                                                                                                                                                >  1:338748/1‑275 (MQ=255)                                                                                                                    aCCTGAAGATAGTCTTCATTTTTACTCCAATGTTTCTTTATTGTTATGGTTTGCGCTGTTTTTGTTTGTTATTCGTAGTAAATATCCACTAACACATGGCTCATAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAACATTGAATGTATTCGCCGAATCCTGAGTAGAAAATATAac                                                                                                                                                         <  1:128032/275‑1 (MQ=255)                                                                                                                       tgatgaTAGTCTTCATTTTTACTCCAATGTTTCTTTATTGTTATGGTTTGCGCTGTTTTTGTTTGTTATTCGTAGTAAACATCCACTAACACATGGCTCATAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTGAGAACATTGAATGTATTCGCCGAATCCTGAGTAGAAAATATAactac                                                                                                                                                      <  1:681977/275‑1 (MQ=255)                                                                                                                                     aTTTTTACTCCAATGTTTCTTTATTGTTATGGTTTGCGCTGTTTTTGTTTGTTATTCGTAGTAAATATCCACTAACACATGGCTCATAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATGACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAACATTGAATGTATTCGCCGAATCCTGAGTAGAAAATATAACAACTCCTACATTAcct                                                                                                                                         >  1:403212/1‑272 (MQ=255)                                                                                                                                          tACTCCAATGTTTCTTTATTGTTATGGTTTGCGCTGTTTTTGTTTGTTATTCGTAGTAAATATCCACTAACACATGGCTCATAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGAATGAAGCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAg                                                                                                                                                                                                   >  1:621659/1‑211 (MQ=255)                                                                                                                                                            gcgtcgttggggtgggatatttttcaggtaatgttactcctgaaagttatcaaccaggtggaaaagagttcactatcactgtatccgactgtgcattacagggaactggcgatGTGCt                                                                                                                                                                                                                                                                              <  2:459176‑M1/5‑1 (MQ=255)                                                                                                                                                                cgttggggtgggatatttttcaggtaatgttactcctgaaagttatcaaccaggtggaaaagagttcactatcactgtatccgactgtgcattacagggaactggcgatGTGCTAAAt                                                                                                                                                                                                                                                                          >  1:459183‑M1/110‑118 (MQ=255)                                                                                                                                                                  tGGTTTTCGCTGTTTTTTTTTGTTATTCGTAGTAAATATCCAATAACAAATGGCTCATAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAACATTGAATGTATTCGCCGAATCCTGAGTAGAAAATATAACTACTCCTACATTACTTGCTCCTGACGAAATTTCATTAGCAAatat                                                                                                            <  1:24430/274‑1 (MQ=255)                                                                                                                                                                  tGGTTTGCGCTGTTTTTGTTTGTTATTCGTAGTAAATATCCACTAACACATGGCTCATAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAACATTGAATGTATACGACGAATCCTGAGTAGAAAATATAACTACTCCTACATTACTGGCTCCTTAAGAAATTTCATTNACAAattat                                                                                                           >  2:271249/1‑272 (MQ=255)                                                                                                                                                                         cgcTGTTTTTGTTTGTTATTCGTAGTAAATATCCACTAACACATGGCTCATAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAACATTGAATGTAtt                                                                                                                                                                                    >  2:597183/1‑195 (MQ=255)                                                                                                                                                                         cgcTGTTTTTGTTTGTTATTCGTAGTAAATATCCACTAACACATGGCTCATAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAACATTGAATGTATTCGCCGAATACTGAGTAGAAAATATAACTACTCCTACATTACTTGCTCCTGACGAAATTTCATTAGCAAATAttttgctaa                                                                                                    >  2:153973/1‑269 (MQ=255)                                                                                                                                                                             gTTTTTGTTTGTTATTCGTAGTAAATATCCACTAACACATGGCTCATAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAACATTGAATGTATTCGcc                                                                                                                                                                                <  1:597192/195‑1 (MQ=255)                                                                                                                                                                                     aggtaatgttactcctgaaagttatcaaccaggtggaaaagagttcactatcactgtatccgactgtgcattacagggaactggcgatGTGCt                                                                                                                                                                                                                                                                              <  1:8370‑M1/5‑1 (MQ=255)                                                                                                                                                                                        ttATTCGTAGTAAATATCCACTAACACATGGCTCATAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAACATTGAATGTATTCGCCGAATCCTGAGTAGAAAATATTACTACTACTACATTACTTGCTCCTGACGAAATTCCATTAGAAAATATTTTACTAGAGCAAGCAGcccta                                                                                      >  2:688687/1‑271 (MQ=255)                                                                                                                                                                                        ttATTCGTAGTAAATATCCACTAACACATGGCTCATAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAACATTGAATGTATTCGCCGAATCCTGAGTAGAAAATATAACTACTCCTACATTACTTGCTCCTGACGAAATTTCATTAGCAAATATTTGCCTAGAGCCAGCAGCCATGa                                                                                     <  1:153976/275‑1 (MQ=255)                                                                                                                                                                                         aatgttactcctgaaagttatcaaccaggtggaaaagagttcactatcactgtatccgactgtgcattacagggaactggcgatGTGCTAAAt                                                                                                                                                                                                                                                                          >  2:8370‑M1/85‑93 (MQ=255)                                                                                                                                                                                                        tCCACTAACACATGGCTCATAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAACa                                                                                                                                                                                               >  2:504123/1‑153 (MQ=255)                                                                                                                                                                                                            cTAACACATGGCTCATAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACTAGATACGACTGAAACATTAAGAACATTGa                                                                                                                                                                                           <  1:504130/153‑1 (MQ=255)                                                                                                                                                                                                            cTAACACATGGCTCATAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGc                                                                                                                                                                                                                >  1:410943/1‑132 (MQ=255)                                                                                                                                                                                                            cTAACACATGGCTCAGAAGTTGATCAGAAGTAACACTCAATGCAGGATAGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCATGAATCATTAAGAACATTGAATGTATTCGCCGAATCATGAGTAGAAAATANAACTACTCCTACATTACTTGCTCCTGACGAAATTTCATTAGCAAATATATGCCTAAAACCAGCAGCCATGACACCACTAAGGGCTCGaaaa                                                                 >  1:498448/1‑275 (MQ=255)                                                                                                                                                                                                            cTAACACATGCCTCATAAGCTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTATTAAAGTTCCAGGATGAACCATTCATGTTAGACGACATTACTGGATACACGGAACGAGATCCg                                                                                                                                                                                                                 >  2:442333/1‑131 (MQ=255)                                                                                                                                                                                                             tcaaccaggtggaaaagagttcactatcactgtatccgactgtgcattacagggaactggcgatgtg                                                                                                                                                                                                                                                                                <  2:569734‑M1/3‑1 (MQ=255)                                                                                                                                                                                                               acacATGGCTCATAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTc                                                                                                                                                                                                                                                                       >  2:175604/1‑74 (MQ=255)                                                                                                                                                                                                                cacaTGGCTCATAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTg                                                                                                                                                                                                             <  1:442340/131‑1 (MQ=255)                                                                                                                                                                                                                cacaTGGCTCATAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCAGCCTGa                                                                                                                                                                                                            <  2:410936/132‑1 (MQ=255)                                                                                                                                                                                                                accaggtggaaaagagttcactatcactgtatccgactgtgcattacagggaactggcgatGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAACATTGAATGTATTCGCCGAATCCTGAGTAGAAAATATAACTACTCCTACATTACTTGCTCCTGACGAAATTTCATTAg                                                                                                                   <  1:243593‑M1/160‑1 (MQ=255)                                                                                                                                                                                                                 ccaggtggaaaagagttcactatcactgtatccgactgtgcattacagggaactggcgatGTGCTaa                                                                                                                                                                                                                                                                            >  1:569743‑M1/61‑67 (MQ=255)                                                                                                                                                                                                                   aTGGCTCATAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAgg                                                                                                                                                                                                                                                                   <  1:175607/74‑1 (MQ=255)                                                                                                                                                                                                                    tGGCTCATAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAg                                                                                                                                                                                                                                                                    >  1:664117/1‑72 (MQ=255)                                                                                                                                                                                                                    ggtggaaaagagttcactatcactgtatccgactgtgcattacagggaactggcgatGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTg                                                                                                                                                                                                             <  2:76361‑M1/70‑1 (MQ=255)                                                                                                                                                                                                                    ggtggaaaagagttcactatcactgtatccgactgtgcattacagggaactggcgatGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAACATTGAATGTATTCGCCGAATCCTGAGTAGAAAATATAACTACTCCTACATTACTTGCTCCTGACGAAATTTCATTAGCaaa                                                                                                               >  2:243588‑M1/58‑221 (MQ=255)                                                                                                                                                                                                                     ggCTCATAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAACATTGAATGTATTCGCCGAATCCTGAg                                                                                                                                                                      >  1:128066/1‑165 (MQ=255)                                                                                                                                                                                                                      gCTCATAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCTAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAACATTGAATGTATTCGCCGAATCCTGAGTAGAAAATATAACTACTCCTACATTACTTGCTCCTGACGAAATTTCATTAGCAAATATTTGCCTAGCGCCAGCAGCCATGa                                                                                     <  1:399163/245‑1 (MQ=255)                                                                                                                                                                                                                       cTCATAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAACATTGAATGTATTCGCCGAATCCTGAGTAGAAAATATAACTACTCCTACATTACTTGCTCCTGACGAAATTTCATTAGCAAATATTTGCCTAGAGCCAGCAGCCATGACACCGCTAAGGGCTCTAAAATCAAAATGTa                                                       >  1:41798/1‑274 (MQ=255)                                                                                                                                                                                                                       cTCATAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAACATTGAATGTATTCGCCGAATCCTGAGTAGAAAATATAACTACTCCTACATTACTTGCTCCTGACGAAATTTCATTAGCAAATATTTGCCTAGAGCCAGCAGCAATGACACCGCTAAGGGCTCTAAAATCAATATTTa                                                       >  2:230646/1‑274 (MQ=255)                                                                                                                                                                                                                        tCATAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATg                                                                                                                                                                                                                                                                <  2:664108/72‑1 (MQ=255)                                                                                                                                                                                                                        gaaaagagttcactatcactgtatccgactgtgcattacagggaactggcgatGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGc                                                                                                                                                                                                         >  1:76362‑M1/54‑127 (MQ=255)                                                                                                                                                                                                                          aTAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGGGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAACATTGAATGt                                                                                                                                                                                       >  2:428723/1‑143 (MQ=255)                                                                                                                                                                                                                           tAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGcc                                                                                                                                                                                                               >  2:172616/1‑118 (MQ=255)                                                                                                                                                                                                                           tAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAACATTGAATGTATTCGCCGAATCCTGAGTAGAAAATATAACTACTCCTACATTACTTGCTCCTGACGAAATTTCATTAGCAAATATTTGCCTAGAACCAGCAGCCATGACACCGCTAAGAGCTCAAAAANTAAAATTTaaataa                                                  >  2:529962/1‑271 (MQ=255)                                                                                                                                                                                                                              gTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAACATTGAATGTATTc                                                                                                                                                                                   <  1:428730/143‑1 (MQ=255)                                                                                                                                                                                                                               ttGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGaa                                                                                                                                                                                                           <  1:172619/118‑1 (MQ=255)                                                                                                                                                                                                                                 gACCAGATGTTACACTCAATGCAGGGTCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATCAACGGAACGAGATCCGCCTg                                                                                                                                                                                                             >  1:703073/1‑114 (MQ=255)                                                                                                                                                                                                                                   ccAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATNAACGGAACGAGATCCGCCTGAAGCATTAAGAACATTGAATGTATTCGCCGAATCCTGAGTAGAAAATATAACTACTCCTACATTACTTGCTCCTGACGAAATTTCATTAGCAAATATTTGCCTAGAGCCAGCAGCCATGACACCGCTAAGGGCTCTAAAATCAATAGGTAACTGATTTAGcac                                          <  1:529970/275‑1 (MQ=255)                                                                                                                                                                                                                                     aGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAACATTGAATGTATTCGCCGAATCCTGAGTAGAAAATATaa                                                                                                                                                          >  2:598824/1‑161 (MQ=255)                                                                                                                                                                                                                                     aGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAAGTTCCAGGATGAACCATTCATGTCATCCGACATTACCGGATAAACGGAACGAGATCCGCCTGAAGc                                                                                                                                                                                                         <  2:703064/114‑1 (MQ=255)                                                                                                                                                                                                                                       aTGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAACATTGAATGTATTCGCCGAATCCTGAGTAGAAAATATAACTACTc                                                                                                                                                    >  1:625970/1‑165 (MQ=255)                                                                                                                                                                                                                                        cactgtatccgactgtgcattacagggaactggcgatGTGCTAAAt                                                                                                                                                                                                                                                                          <  1:315754‑M1/9‑1 (MQ=255)                                                                                                                                                                                                                                         gTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAACATTGAATGTATTCGCCGAATCCTGAGTAGAAAATATAactac                                                                                                                                                      <  1:598833/161‑1 (MQ=255)                                                                                                                                                                                                                                           aaCACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAACATTGAATGTATTCGCCGAATCCTGAGTAGAAAATATAACTACTCCTAc                                                                                                                                                <  2:625961/165‑1 (MQ=255)                                                                                                                                                                                                                                                 cAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAg                                                                                                                                                                                                                                                                    >  1:333006/1‑43 (MQ=255)                                                                                                                                                                                                                                                 cAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGc                                                                                                                                                                                                         >  2:372648/1‑102 (MQ=255)                                                                                                                                                                                                                                                 cAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTACGAACATTGAATGTATTCGCCGAATCCTGAGTAGAAAATATAACTACTCCTACATTACTTGCTCCTGACGAAATTTCATTAGCAAATATTTGCCTAGAGCAAGAAGCCATGACACTGCTAAGGGCCCTAAAATCAATCTGTAACTGATTTAGCACATCGCCATTTccc                             >  2:228355/1‑274 (MQ=255)                                                                                                                                                                                                                                                 cAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAACATTGAATGTATTCGCCGAATCCTGAGTAGAAAATATAACTACTCCTACATTACTTGCTCCTGACGAAATTTCATTAGCAAATATTTGCCTAGAGc                                                                                                 >  1:129635/1‑206 (MQ=255)                                                                                                                                                                                                                                                    tGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAACATTGAATGTATTCGCCGAATCCTGAGTAGaaaa                                                                                                                                                               >  2:399372/1‑141 (MQ=255)                                                                                                                                                                                                                                                    tGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAACATTGAATGTATTCGCCGAATCCTGAGTAGAAAATATAACTACTcc                                                                                                                                                   >  2:616646/1‑153 (MQ=255)                                                                                                                                                                                                                                                     gCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATg                                                                                                                                                                                                                                                                <  2:333000/43‑1 (MQ=255)                                                                                                                                                                                                                                                     gCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTa                                                                                                                                                                                                     <  1:372654/102‑1 (MQ=255)                                                                                                                                                                                                                                                     gCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAACATTGAATGTATTCGCCGAATCCTGAGTAGAAAATATAACTACTCCTACATTACTTGCTCCTGACGAAATTTCATTAGCAAATATTTGCCTAGAGCcagc                                                                                             <  2:129634/206‑1 (MQ=255)                                                                                                                                                                                                                                                        ggATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAACATTGAATGTATTCGCCGAATCCTGAGTAGAAAAtata                                                                                                                                                           <  1:399379/141‑1 (MQ=255)                                                                                                                                                                                                                                                        ggATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAACATTGAATGTATTCGCCGAATCCTGAGTAGAAAATATAACTACTCCTACa                                                                                                                                               <  1:616655/153‑1 (MQ=255)                                                                                                                                                                                                                                                         gATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATcc                                                                                                                                                                                                                                               >  1:384721/1‑56 (MQ=255)                                                                                                                                                                                                                                                         gATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAACATTGAATGTATTCGCCGAATCCTg                                                                                                                                                                        >  2:135890/1‑127 (MQ=255)                                                                                                                                                                                                                                                             gATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGAcc                                                                                                                                                                                                                                           <  2:384715/56‑2 (MQ=255)                                                                                                                                                                                                                                                             gATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAACATTGAATGTATTCGCCGAATCCTGAGTa                                                                                                                                                                    <  1:135891/127‑1 (MQ=255)                                                                                                                                                                                                                                                              aTTTTTTGCATTCGGGTGCTAAATTTGCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAACATTGAATGTATTCGCCGAATCCTGAGTAg                                                                                                                                                                   >  1:476265/1‑127 (MQ=255)                                                                                                                                                                                                                                                              aTTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCACCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAACATTGAATGTATTCGCCGAATCCTGAGTAGAAAATATAACTACTCCTACATTACTTGCTCCTGACGAAATTTCATTAGCAGATATTTGCCTAGAGCCAGCAGCCATGACACCGCTAAGGGct                                                                       >  1:386360/1‑219 (MQ=255)                                                                                                                                                                                                                                                                  tttGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAACATTGAATGTATTCGCCGAATCCTGAGTAGaaaa                                                                                                                                                               <  2:476258/127‑1 (MQ=255)                                                                                                                                                                                                                                                                  tttGCATTAGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAACATTGAATGTATTCGCCGAATCCTGAGTAGAAAATATAACTACTCCTACATTACTTGCTCCTGACGAAATTTCATTAGCAAATATTTGCCTAGAGCCAGCAGCCATGACACCGCTAAGGGCTCTaa                                                                   <  2:386354/219‑1 (MQ=255)                                                                                                                                                                                                                                                                   tttcATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAACATTGAATGTATTCGCCGAATCCTGAGTAGAAAATATAACTACTCCTACATTACTTGCTCCTGACGAAATTTCATTAGCAAATATTTGCCTAGAGCCAGCAGCCATGACACCGCTAAGGGCTCTAAAATCAATATGTAACTGATTTAGCACATCGCCAGTTCCCTGTAATGCACAGTCGGATa          <  1:101626/272‑1 (MQ=255)                                                                                                                                                                                                                                                                         tCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTNAGAACATTNAATGTATTCGCCTAATCCTGAGTAGAAAATATAACTACTCCTACATTACTTGCTCCTGACGAAATTTCATTAGCAAATATTTGCCTAGAGCCAGCAGCCATGACACCGCTAAGGGCTCTAAAATCAATATGTAACTGATTTAGCACATTGCCAGTTCCCTGTAATGCACAGTCGGATACAGTg     <  1:479441/274‑1 (MQ=255)                                                                                                                                                                                                                                                                            ggTGCTAAATTTCCCGGATGAACCATTCGTGTCATCCAACATTACTGGATAAACGGAACGAGATCCGCCTGAAACATTAAGAACATTGAATGTATTCGCCAAATCCTGAGTAGAAAATATAACTACTCCTACATTACTTGCTCCTGACGAAATTTCATTAGCAAATATTTGCCTATAGCCAGCNGCCATGACACAGCTAAGGGCTCTAAAATCAATATGTAACTGATTTAGAACATCGCCAGTTCCATGTAATGCACAATCGGATACAGTAATa  >  1:516542/1‑274 (MQ=255)                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                                 TGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTACAACAAGAATACAGTGCTAAAAAAAGAATGTACCTGAAGATAGTCTTCATTTTTACTCCAATGTTTCTTTATTGTTATGGTTTGCGCTGTTTTTGTTTGTTATTCGTAGTAAATATCCACTAACACATGGCTCATAAGTTGACCAGATGTAACACTCAATGCAGGATCGATTTTTTGCATTCGGGTGCTAAATTTCCAGGATGAACCATTCATGTCATCCGACATTACTGGATAAACGGAACGAGATCCGCCTGAAGCATTAAGAACATTGAATGTATTCGCCGAATCCTGAGTAGAAAATATAACTACTCCTACATTACTTGCTCCTGACGAAATTTCATTAGCAAATATTTGCCTAGAGCCAGCAGCCATGACACCGCTAAGGGCTCTAAAATCAATATGTAACTGATTTAGCACATCGCCAGTTCCCTGTAATGCACAGTCGGATACAGTGATA  >  CP009273/147307‑147847

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.