New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 156954	67 (1.740)	8 (0.220)	6/302	NT	11.6%	coding (138/456 nt)	dksA	transcriptional regulator of rRNA transcription, DnaK suppressor protein
	?	CP009273	= 157041	58 (1.570)					coding (51/456 nt)	dksA	transcriptional regulator of rRNA transcription, DnaK suppressor protein

GGCTGTCGGGCGCGCTTCCAGACGGCGAATACCAATTTCAACACCGCAGGATTCGCAGTAGCCGAAATCTTCGTCTTCCACTTTTTTCAGCGTCTTCTCGATCTTTTTGATCAGCTTACGCTCGCGATCGCGGTTACGCAGTTCGAGGCTGAACTCTTCTTCCTGGGCTGCACGGTCTACCGGGTCCGGGAAGTTGGCTGCTTCATCCTGCATATGTGTAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGATATGGTTCCACCCCAGCGATGGCGAGAATACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGAAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACTGTG  >  CP009273/156696‑157209                                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                                ggCTGTCGGGCGCGCTTCCAGACGGCGAATACCAATTTCAACACCGCAGGATTCGCAGTAGCCGAAATCTTCGTCTTCCACTTTTTTCAGCGTCTTCTCGATCTTTTTGATCAGCTTACGCTCGCGATCGCGGTTACGCAGTTCGAGGCTGAACTCTTCTTCCTGGGCTGCACGGTCTACCGGGTCCGGGAAGTTGGCTGCTTAATCCTGCATATTTGTAACGGTGCGATAGACTGCATCCCGGAGTTTATTAAGCCATGCTTCCAgcaaacaaa                                                                                                                                                                                                                                                 >  1:335329/1‑267 (MQ=255) ggCTGTCGGGCGCGCATCCAGACCGCGATTACCAATTTCAACACCGCAGGATTCGCAGTAGCCGAAATCTTCGTCTTCCACTTTTTTCAGCGTCTTCTCGATCTTTTTGATCAGCTTACGCTCGCGATCGCGGTTACGCAGTTCGAGGCTGAACTCTTCTTCCTGGGCTGCACGGTCTACCGGNTCCGGGAAGTTGGCTGCTTCATCCTGCATATGTGTAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCAAGAATacg                                                                                                                                                                                                                                                   >  1:507189/1‑273 (MQ=255)                  ccAGACGGCGAATACCAATTTCAACACCGCAGGATTCGCAGTAGCCGAAATCTTCGTCTTCCACTTTTTTCAGCGTCTTCTCGATCTTTTTGATCAGCTTACGCTCGCGATCGCGGTTACGCAGTTCGAGGCTGAACTCTTCTTCCTGGGCTGCACGGTCTACCGGGTCCGGGAAGTTGGCTGCTTCATCCTGCATATGTGTAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGGCCTGCTTCCAGAATACGACGGAGGTGCGccgggggt                                                                                                                                                                                                                                >  2:187536/1‑269 (MQ=255)                         gCGAATCCCAATTTCATCACGGCCTGATTCGCAGTAGCCGCTATCTTCGTCTTCCACTTTTTTCGGCGTCTGCTCGATCTTGTTGATCAGCTTACGCTCGCGATCGCGGTTACGCAGTTCGAGGCTGAACTCTTCTTCCTGGGCTGCACGGTCTACCGGGTCCGGGAAGTTGGCTGCTTCATCCTGCATAGGTGTAACGGTACGGTCGACTTGATCCCTGAGTTGATTACGCCATGCTTCCAGCATACGACGGCAGTGCGACAGCTGGGCttca                                                                                                                                                                                                                          <  2:302174/274‑1 (MQ=255)                          cGAATACCAATTTCAACACCGCAGGATTCGCAGTAGCCGAAATCTTCGTCTTCCACTTTTTTCAGCGTCTTCTCGATCTTTTTGATCAGCTTACGCTCGCGATCGCGGTTACGCAGTTCGAGGCTGAACTCTTCTTCCTGGGCTGCACGGTCTACCGGGTCCGTGAAGTTGGCTGCTTCATCCNGCATATGTGTAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGCCGGAAGTGCGCCAGCTGGGCttcat                                                                                                                                                                                                                         >  1:540093/1‑274 (MQ=255)                                             cGCAGGATTCGCAGTAGCCGAAATCTTCGTCTTCCACTTTTTTCAGCGTCTTCTCGATCTTTTTGATCAGCTTACGCTCGCGATCGCGGTTACGCAGTTCGAGGCTGAACTCTTCTTCCTGGGCTGCACGCTCTACCGGGTCCGGGAAGTTGGCTGCTTCATCCTGCATATGTGTAACGTTGCGATCGACTTCATCCCTGAGTTGATTACGCAATg                                                                                                                                                                                                                                                                >  1:428976/1‑216 (MQ=255)                                                       gaaGTAGCCTAAATTTTCGTCTTCCACTTTTGTCAGCGTCTTCTCGATCTTTTTGATCAGCATACGCTCGCGATCGCGGTTACGCAGTTCGAGTCTGTACTCTTCTTCCGGGGCTGCACGGTCGACCGGGTCCGGGAAGGTGGCTGCTTCATCCTGCATATGTGTAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGat                                                                                                                                                                                           <  1:360448/273‑1 (MQ=255)                                                            aGCCGAAATCTTCGTCTTCCACTTTTTTCAGCGTCTTCTCGATCTTTTTGATCAGCTTACGCTCGCGATCGCGGTTACGCAGTTCGAGGCTGAACTCTTCTTCCTGGGCTGCACGGTCTACCGGGTCCGGGAAGTTGGCTGCTTCATCCTGCATATGTGTAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGcc                                                                                                                                                                                                                                      >  2:163619/1‑227 (MQ=255)                                                              gagAAATTTTGATCTTCCACTTTTTTCCGCGTCTTCTCGATCTTTTTGTTCAGCTTACGCTCGCGATCTCGGTTACGCAGTTCGAGGCTGAACTCTTCTTCCTGGGCTGCACGGTCTACCGGGTCCGGGAAGTTGGCTGCTTCATCCTGCATATGTGTAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGATATGGt                                                                                                                                                                                      <  2:507182/271‑1 (MQ=255)                                                                gAAATCTTCGTCTTCCACTTTTTTCAGCGTCTTCTCGATCTTTTTGATCAGCTTACGCTCGCGATCGCGGTTACGCAGTTCGAGGCTGAACTCTTCTTCCTGGGCTGCACGGTCTACCGGGTCCGGGAAGTTGGCTGCTTCATCCTGCATATGTGTAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCt                                                                                                                                                                                                                                  <  1:163622/227‑1 (MQ=255)                                                                                 cTTTTTTCAGCGTCTTCTCGATCTTTTTGATCAGCTTACGCTCGCGATCGCGGTTACGCAGTTCGAGGCTGAACTCTTCTTCCTGGGCTGCACGGTCTACCGGGTCCGGGAAGTTGGCTGCTTCATCCTGCATATGTGTATCGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGATATGGTTCCACCCCAGCGATGGCgaga                                                                                                                                                                 <  1:345804/275‑1 (MQ=255)                                                                                            gTCTTCTCGATCTTTTTGATCAGCTTACGCTCGCGATCTCGGTTACGCAGTTCGAGGCTGAACTCTTCTTCCTGGGCTGCACGGTCTACCGGGTCCGGGAAGTTGGCTGCTTCATCCTGCATATGTGTAACGGTGCGATCGACTTCATCCCTGAGTTGACTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGATATGGTTCCACCCCAGCGATGGCGAGAATACTCAGGGa                                                                                                                                                      <  2:286990/275‑1 (MQ=255)                                                                                                                   cTTACGCTCGCGATCGCGGTTACGCAGTTCGAGGCTGAACTCTTCTTCCTGGGCTGCACGGTCTACCGGGTCCGGGAAGTTGGCTGCTTCATCCTGCATATGTGTAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATacgacg                                                                                                                                                                                                                                                >  1:130208/1‑162 (MQ=255)                                                                                                                      aCGCTCGCGATCGCGGTTACGCAGTTCGAGGCTGAACTCTTCTTCCTGGGCTGCACGGCCTACCGGGTCCGGGAAGTTGGCTGCTTCATCCTGCATATGTGTAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCtt                                                                                                                                                                                                                            <  1:150912/179‑1 (MQ=255)                                                                                                                       cGCTCGCGATCGCGGTTACGCAGTTCGAGGCTGAACTCTTCTTCCTGGGCTGCACGGTCTACCGGGTCCGGGAAGTTGGCTGCTTCATCCTGCATATGTGTAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAg                                                                                                                                                                                                                                            <  2:130207/162‑1 (MQ=255)                                                                                                                             cgATCGCGGTTACGCAGTTCGAGGCTGAACTCTTCTTCCTGGGCTGCACGGTCTACCGGGTCCGGGAAGTTGGCTGCTTCATCCTGCATATGTGTAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGATATGGTTCCACCCCAGCGATGGCGAGAATACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGt                                                                                                                      >  1:299154/1‑274 (MQ=255)                                                                                                                                 cgcgTTTACTTAGTTGGGGTCTGAACTCTTCTTCCTTGTCTGCACGTTTTACCTGGTACGGGAAGTTGGCTGCTTCATCCTGCAGATGTGTAACGGTGCGAGCGACTTCATCCCTGAGTTGATTACGCCAGGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGATATGGTTCCACCCCAGCGATGGCGAGAATACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCtt                                                                                                                 <  1:307777/275‑1 (MQ=255)                                                                                                                                  gcgGTTACGCAGTTCGAGGCTGAACTCTTCTTCCTGGGCTGCACGGTCTACCGGGTCCGGGAAGTTGGCTGCTTCATCCTGCATATGTGTAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCACCTGATATGGTTCCACCCCAGCGATGGCGAGAATACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCtt                                                                                                                 <  1:187539/274‑1 (MQ=255)                                                                                                                                                   ggCTGAACTCTTCTTCCTGGGCTGCACGGTCTACCGGGTCCGGGAAGTTGGCTGCTTCATCCTGCATATGTGTAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGc                                                                                                                                                                                                                              >  2:686841/1‑148 (MQ=255)                                                                                                                                                       gAACTCTTCTTCCTGGGCTGCACGGTCTACCGGGTCCGGGAAGTTGGCTGCTTCATCCTGCATATGTGTAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCttca                                                                                                                                                                                                                          <  1:686850/148‑1 (MQ=255)                                                                                                                                                        aaCTCTTCTTCCTGGGCTGCACGGTCTACCGGGTCCGGGAAGTTGGCTGCTTCATCCTGCATATGTGTAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGATATGGTTCCACCCCAGCGATGGCGAGAATACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATc                                                                                          >  1:166469/1‑275 (MQ=255)                                                                                                                                                            cttcttCCTGGGCTGCACGGTCTACCGGGTCCGGGAAGTTGGCTGCTTCATCCTGCATATGTGTAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGATATGGTTCCACCCCAGCGATGGCGAGAATACTCAGGGACg                                                                                                                                                    <  1:254307/213‑1 (MQ=255)                                                                                                                                                                   cTGGGCCGCACGGTCTACCCGGTCCGTGAAGTTGGCTGCTTCATCCTGCATATGTGTAACGGTGCGATCTACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGATATGGTTCCACCCCAGCGATGGCGAGAATACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCg                                                                                <  2:166466/274‑1 (MQ=255)                                                                                                                                                                       gCTGCACGGTCTGCCGGGTACGGGAAGTTGGTTGCTTCATCCTGCATTTGTGTAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGATATGGTTCCACCCCAGCGATGGCGAGAATACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCggggg                                                                            <  2:299148/274‑1 (MQ=255)                                                                                                                                                                                  tACCGGGTCCGGGAAGTTGGCTGCTTCATCCTGCATATGTGTAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTcc                                                                                                                                                                                               >  1:639436/1‑148 (MQ=255)                                                                                                                                                                                   gaaaggTCCGCGAATGTGGCTGCTTCATCCTGCCTGTGTGTAACGGTGCGATCGTCTTCCTCCCTGAGTTGAGTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGATATGGTTCCACCCCAGCGATGGCGAGAATACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCATCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGAAAAATGAGGCCg                                                               <  2:189238/271‑1 (MQ=255)                                                                                                                                                                                      gggTCCGGGAAGTTGGCTGCTTCATCCTGCATATGTGTAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGat                                                                                                                                                                                           <  2:639427/148‑1 (MQ=255)                                                                                                                                                                                          ccGGGAAGTTGGCTGCTTCATCCTGCATATGTGTAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTgcgc                                                                                                                                                                                                                                       >  2:417629/1‑100 (MQ=255)                                                                                                                                                                                          ccGGGAAGTTGGCTGCTTCATCCTGCATATGTGTAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTgg                                                                                                                                                                                                                                >  2:251572/1‑107 (MQ=255)                                                                                                                                                                                          ccGGGAAGTTGGCTGCTTCATCCTGCATATGTGTAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGATATGGTTCCACCCCAGCGATGGCGAGAATACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGAACCCCATGGTCGGGGGAAAAAGGAg                                                                   >  1:189241/1‑264 (MQ=255)                                                                                                                                                                                              gAAGTTGGCTGCTTCATCCTGCATATGTGTAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGc                                                                                                                                                                                                                                   <  1:417636/100‑1 (MQ=255)                                                                                                                                                                                              gAAGTTGGCTGCTTCATCCTGCATATGTGTAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCtt                                                                                                                                                                                                                            <  1:251577/107‑1 (MQ=255)                                                                                                                                                                                                            cATCCTGCATATGTGTAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATcgctggggtggaaccatatcaggagaagccgggcgaagagtatatgaatgaa                                                                                                                                                                                                             >  2:291910‑M1/1‑56 (MQ=255)                                                                                                                                                                                                            cATCCTGCATATGTGTAACGGTGCGATCGACTTCATCCCTGAG‑TATTCTCGCCATcgctggggtggaaccatatcaggagaagccgggcgaaga                                                                                                                                                                                                                          >  2:445645‑M1/1‑55 (MQ=255)                                                                                                                                                                                                                cTGCATATGTGTAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATcgctggggtggaaccatatcaggagaagccgggcgaagagtatatgaatgaagccc                                                                                                                                                                                                         <  1:291916‑M1/108‑57 (MQ=255)                                                                                                                                                                                                                cTGCATATGTGTAACGGTGCGATCGACTTCATCCCTGAG‑TATTCTCGCCATcgctggggtggaaccatatcaggagaagccgggcgaagagtat                                                                                                                                                                                                                      <  1:445652‑M1/94‑44 (MQ=255)                                                                                                                                                                                                                   cATATGTGTAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATcgctggggtggaaccatatcaggagaagccgggcgaagagtatatgaatgaagcccagctggcgcacttccg                                                                                                                                                                                         >  1:247224‑M1/1‑49 (MQ=255)                                                                                                                                                                                                                   cATATGTGTAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTgg                                                                                                                                                                                                                                >  1:454077/1‑82 (MQ=255)                                                                                                                                                                                                                   cATATGTGTAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGcc                                                                                                                                                                                                         >  2:309250/1‑105 (MQ=255)                                                                                                                                                                                                                   cATATGTGTAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGATATGGTTCCACCCCAGCGATGGCGAGACTACTCAGGGACGATGTTTTACg                                                                                                                                          >  1:479008/1‑168 (MQ=255)                                                                                                                                                                                                                       tgtgTAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATcgctggggtggaaccatatcaggagaagccgggcgaagagtatatgaatgaagcccagctggcgcacttccgtcgt                                                                                                                                                                                     <  2:247219‑M1/121‑77 (MQ=255)                                                                                                                                                                                                                       tgtgTAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGc                                                                                                                                                                                                                                                               <  2:308304/47‑1 (MQ=255)                                                                                                                                                                                                                       tgtgTAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCtt                                                                                                                                                                                                                            <  2:454070/82‑1 (MQ=255)                                                                                                                                                                                                                       tgtgTAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGc                                                                                                                                                                                                     <  1:309256/105‑1 (MQ=255)                                                                                                                                                                                                                       tgtgTAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGATATGGTTCCACCCCAGCGATGGCGAGAATACTCAGGGACGATGTTTTACGGttt                                                                                                                                      <  2:479001/168‑1 (MQ=255)                                                                                                                                                                                                                        gtgtAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGccc                                                                                                                                                                                                        >  2:512511/1‑101 (MQ=255)                                                                                                                                                                                                                        gtgtAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGATATGGTTCCACCCCAGCGATGGCGAGAATACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGAACTATCGATCCCCATGTTCGGGGGAAAATTGAGGCCGCTATAAATAGCAGAGGCTTTTCCGGATAGCAAtcaaa                          >  1:381379/1‑271 (MQ=255)                                                                                                                                                                                                                           tAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGt                                                                                                                                                                                                                                           >  1:562734/1‑63 (MQ=255)                                                                                                                                                                                                                            aaCGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGCGCTTCATTCATATACTCTTCGCCCGGCt                                                                                                                                                                                                    <  1:512518/101‑1 (MQ=255)                                                                                                                                                                                                                             aCGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATcgctggggtggaaccatatcaggagaagccgggcgaagagtatatgaatgaagcccagctggcgcacttccg                                                                                                                                                                                         >  2:447032‑M1/1‑39 (MQ=255)                                                                                                                                                                                                                             aCGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTgg                                                                                                                                                                                                                                >  1:471370/1‑72 (MQ=255)                                                                                                                                                                                                                             aCGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTACATTCATATACTCTTCGCCCGGCTTCTCCTGATATGGTTCCACCCCAGCGATGGCGAGAATACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTCACACCCACTATCTATCCCCATGGTCGGGGGAAAAATGAGGCCGCTATAAAAAGCAGATGCATTTCCGGATACCAATTGTCTaaa                      >  2:299744/1‑274 (MQ=255)                                                                                                                                                                                                                               ggTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTgcgc                                                                                                                                                                                                                                       <  2:562725/63‑1 (MQ=255)                                                                                                                                                                                                                                 tGCGATCGACTTCATCCCTGAGTTGATTACGCCATg                                                                                                                                                                                                                                                                >  2:61229/1‑36 (MQ=255)                                                                                                                                                                                                                                 tGCGATCGACTTCATCCCTGAGTTGATTACGCCATcgctggggtggaaccatatcaggagaagccgggcgaagagtatatgaatgaagcccagctggcgcacttccgtcgt                                                                                                                                                                                     <  1:447039‑M1/111‑77 (MQ=255)                                                                                                                                                                                                                                 tGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCt                                                                                                                                                                                                                                  >  2:177267/1‑66 (MQ=255)                                                                                                                                                                                                                                 tGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCtt                                                                                                                                                                                                                            <  2:471363/72‑1 (MQ=255)                                                                                                                                                                                                                                 tGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGATATGGTTCCACCCCAGCGATGGCGAGAATACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGAAAAATGAGGCCGCTATAAATAGCAGCTGCTTTTCCGGATAGCAATTATCTAAACGTaa                 >  1:431994/1‑275 (MQ=255)                                                                                                                                                                                                                                 tGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGATATGGTTCCACCCCAGCGATGGCGAGAATACTCAGGGACGATGTTTTACGGTTTTGCCCTCCTTGCATGTTGCTTCTCCTTAACACGCACTAACGTTCCTCATGTTCGGGGGCAAAATGAg                                                                   >  1:21/1‑225 (MQ=255)                                                                                                                                                                                                                                  gCGATCGACTTCATCCCTGAGTTGATTACGACATGCTTCCAGAATTCGACGGAAGTGCGCCAGCTTGGCTTCAGTCATATACTCTTCGCCCGGCTTCTCCTGAGATGGTTCCACCCCAGCGATGGCGAGAATACTCAGTGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGAAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTaa                 <  1:446935/274‑1 (MQ=255)                                                                                                                                                                                                                                   cGATCTACTTCATCCCTGTGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGNCTTCTCCTGATATGGTTCCCCCCCAGCGATGGCGAGAATACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGAAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAaca               <  1:540328/275‑1 (MQ=255)                                                                                                                                                                                                                                   cGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGATATGGTTCCACCCCAGCGatg                                                                                                                                                                       <  2:198729‑M2/123‑4 (MQ=255)                                                                                                                                                                                                                                   cGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGATATGGTTCCACCCCAGCGATGGCGAGaa                                                                                                                                                                >  2:133777/1‑130 (MQ=255)                                                                                                                                                                                                                                   cGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGATATGGTTCCACCCCAGCGATGGCGAGAATACTCAGGGACGATGt                                                                                                                                                >  2:200750/1‑146 (MQ=255)                                                                                                                                                                                                                                   cGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGATATGGTTCCACCCCAGCGATGGCGAGAATACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGAAAAATGAg                                                                   >  1:579857/1‑223 (MQ=255)                                                                                                                                                                                                                                   cGATCGACTTCATCCCTGAGTTGATTACCCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCt                                                                                                                                                                                              >  1:553465/1‑100 (MQ=255)                                                                                                                                                                                                                                     aTCGACTTCATCCCTGAGTTGATTACGCCATGCTTc                                                                                                                                                                                                                                                            <  1:61230/36‑1 (MQ=255)                                                                                                                                                                                                                                     aTCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGc                                                                                                                                                                                                                              <  1:177270/66‑1 (MQ=255)                                                                                                                                                                                                                                     aTCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGATATGGTTCCACCCCAGCGATGGCGAGAATACTCAgg                                                                                                                                                        >  2:474209/1‑136 (MQ=255)                                                                                                                                                                                                                                     aTCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGATATGGTTCCACCCCAGCGATGGCGAGAATACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCTATCCCCATGCTCGGGGGAAAAATGAGGCCGCTATAAATAGCAAATGCATTTCCGTATAGAAAATATCTAAACGAAacaat             >  2:692769/1‑273 (MQ=255)                                                                                                                                                                                                                                       cGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGata                                                                                                                                                                                          <  2:553456/100‑1 (MQ=255)                                                                                                                                                                                                                                       cGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGATATGGTTCCACCCCAGCGATGGCga                                                                                                                                                                   <  1:198732/123‑1 (MQ=255)                                                                                                                                                                                                                                       cGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGATATGGTTCCACCCCAGCGATGGCGAGAATACt                                                                                                                                                            <  1:133778/130‑1 (MQ=255)                                                                                                                                                                                                                                       cGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGATATGGTTCCACCCCAGCGATGGCGAGAATACTCAGGGACGATGTTTTa                                                                                                                                            <  1:200753/146‑1 (MQ=255)                                                                                                                                                                                                                                       cGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGATATGGTTCCACCCCAGCGATGGCGAGAATACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGAAAAATGAGGCCg                                                               <  2:579848/223‑1 (MQ=255)                                                                                                                                                                                                                                         aCTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGATATGGTTCCACCCCAGCGATGGCGAGAATACTCAGGGACg                                                                                                                                                    <  1:474216/136‑1 (MQ=255)                                                                                                                                                                                                                                           ttCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGATATAGTTCCACCCCAGCGATGGCGAGAATACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGAAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACaa       <  1:394056/275‑1 (MQ=255)                                                                                                                                                                                                                                                cccTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGATATGGTTCCACCCCAGCGATGGCGAGAATACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGAAAAATGAGGCCGCTATAAATAGCAGATACTTTTCCGGATAGCAATTATCTAAACGTAACACTTGAAAACtgtt  >  1:230371/1‑274 (MQ=255)                                                                                                                                                                                                                                                          aTTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGATATGGTTCCACCCCAGCGATGGCGAGAATACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGtt                                                                                                                     >  1:109170/1‑150 (MQ=255)                                                                                                                                                                                                                                                              cGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGATATGGTTCCACCCCAGCGATGGCGAGAATACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCtt                                                                                                                 <  2:109169/150‑1 (MQ=255)                                                                                                                                                                                                                                                               gCCATcgctggggtggaaccatatcaggagaagccgggcgaagagtatatgaatgaagcccagctggcgcacttccgtcgtattctggaagcatggc                                                                                                                                                                     <  2:606115‑M1/97‑93 (MQ=255)                                                                                                                                                                                                                                                               gCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGATATGGTTCCACCCCAGCGatggc                                                                                                                                                                     <  2:606115‑M2/97‑6 (MQ=255)                                                                                                                                                                                                                                                                 cATcgctggggtggaaccatatcaggagaagccgggcgaagagtatatgaatgaagcccagctggcgcacttccgtcgtattctggaagcatggcgtaatcaactcagggatgaagtcgatcg                                                                                                                                         <  2:198729‑M1/123‑121 (MQ=255)                                                                                                                                                                                                                                                                 cATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGATATGGTTCCACCCCAGCGATGGCGAGAATACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTCACACGCACTATCGATCCCCATGTTCGGGGGAAAAATGAg                                                                   >  1:199293/1‑193 (MQ=255)                                                                                                                                                                                                                                                                  aTcgctggggtggaaccatatcaggagaagccggg                                                                                                                                                                                                                                >  1:173220‑M1/1‑2 (MQ=255)                                                                                                                                                                                                                                                                   tGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGATATGGTTCCACCCCAGCGATGGCgaga                                                                                                                                                                 <  1:606124/97‑1 (MQ=255)                                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                                GGCTGTCGGGCGCGCTTCCAGACGGCGAATACCAATTTCAACACCGCAGGATTCGCAGTAGCCGAAATCTTCGTCTTCCACTTTTTTCAGCGTCTTCTCGATCTTTTTGATCAGCTTACGCTCGCGATCGCGGTTACGCAGTTCGAGGCTGAACTCTTCTTCCTGGGCTGCACGGTCTACCGGGTCCGGGAAGTTGGCTGCTTCATCCTGCATATGTGTAACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGCTGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGATATGGTTCCACCCCAGCGATGGCGAGAATACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGAAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACTGTG  >  CP009273/156696‑157209

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.