New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	1911910 =	32 (0.830)	4 (0.110)	4/298	NT	13.9%	coding (144/2634 nt)	yebT	MCE domain protein
	?	CP009273	1912103 =	19 (0.520)					coding (337/2634 nt)	yebT	MCE domain protein

TCAGATCCTCGCTTTTACTATGGGACCGGCTGCGTTTTATTTCGGCGCAGCGGTAATTTTGACTATTCTTGCTGTGGAATGGCTGGACAGCCGCTTACTTTGGGATGCACATGAGTCAGGAAACGCCCGCTTCGACGACTGAAGCGCAGATTAAAAATAAACGCCGTATCTCACCTTTCTGGCTGCTGCCGTTCATCGCGCTAATGATTGCCAGTTGGCTGATTTGGGACAGTTATCAGGACCGGGGTAATACCGTCACCATCGACTTTATGTCGGCGGATGGTATTGTTCCAGGCCGTACGCCTGTTCGTTATCAGGGCGTTGAAGTCGGAACAGTGCAGGATATCAGCCTCAGCGACGATCTTCGTAAGATTGAAGTCAAGGTCAGCATCAAGTCCGATATGAAAGATGCGCTGCGCGAAGAGACTCAGTTCTGGCTGGTGACGCCAAAAGCATCGTTGGCAGGTGTCTCCGGGCTGGACGCCCTCGTCGGTGGGAACTATATCGGCATGATGCC  >  CP009273/1911657‑1912173                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                        tCAGTTCCTCGCTTTTTCTATGGGACCGGCTGCGTTTTATTTCGGCGCAGCGGTAATTTTGACTATTCTTGCTGTGGAATGGCTGGACAGCCGCTTACTTTGGGATGCACATGAGTCAGGAAACGCCCGCTTCGACGACTGAAGCGCAGATTAAAAATAAACGCCGTATCTCACCTTTCTGGCTGCTGCCGTTCATCGCGCTAATGATTGCCAGTTGGCTGATTTGGGACAGTTATCAGGACCGGGGTAATACCGTCACCATCGACTTTATGTcg                                                                                                                                                                                                                                                    <  1:316635/275‑1 (MQ=255)      tcttCGCTTTTACTATGGGACCGGCTGCGTTTTATTTCGGCGCAGCAGTAATTTTGACTATTCTTGCTGTGGAATGGCTGGACAGCCGCTTNCTTTGGGATGAACATGAGTCAGGAAACGCCCGCTTCGACGACTGAAGCGCAGATTAAAAATAAACGCCGTATCTCACCTTTCTGGCTGCTGCCGTTCATCGCGCGAATGATTGCCAGTTGGCTGATTTGGGACAGTTATCAGGACCGGGGTAATACCGTGACCATCGTCTTTATGTCGGCGGa                                                                                                                                                                                                                                               <  1:493939/272‑1 (MQ=255)           gCTTTTACTATGGGACCGGCTGCGTTTTATTTCGGCGCGGCGGTAATTTTGACTATTCTTGCTGTGGAATGGCTGGACAGCCGCTTACTTTGGGATGCACATGAGTCAGGAAACGCCCGCTTCGACGACTGAAGCGCAGATTAAAAATAAACGCCGTATCTCACCTTTCTGGCTGCTGCCGTTCATCGCGCTAATGATTGCCAGTTGGCTGATTTGGGACAGTTATCAGGACCGGGGTAATACCGTCACCATCGACTTTATGTCGGCGGATGGTa                                                                                                                                                                                                                                          <  1:351795/275‑1 (MQ=255)                       ggACCGGCTGCGTTTTATTTCGGCGCAGCGGTAATTTTGACTATTCTTGCTGTGGAATGGCTGGACAGCCGCTTACTTTGGGATGCACATGAGTCAGGAAACGCCCGCTTCGACGACTGAAGCGCAGATTAAAAATAAACGCCGTATCTCACCTTTCTGGCTGCTGCCGTTCATCGCGCTAATGATTGCCAGTTGGCTGATTTGGGACAGTTATCAGGACCGGGGTAATACCGTCACCATCGACTTTATGTCGGCGGATGGTATTGTTCCAGGcc                                                                                                                                                                                                                              >  2:184655/1‑275 (MQ=255)                                                cAGAGGTGATTTTGACTATTCTTGCTGTGGAATGGCTGTCCCGCCGCTTACTTTGGGATGCACATGAGTCAGGAAACGCCCGCTTCGACGACTGAAGCGCAGATTAAAAATAAACGCCGTATCTCACCTTTCTGGCTGCTGCCGTTCATCGCGCTAATGATTGCCAGTTGGCTGATTTGGGACAGTTATCAGGACCGGGGTAATACCGTCACCATCGACTTTATGTCGGCGGATGGTATTGTTCCAGGCCGTACGCCTGTTCGTTATCAGGGCg                                                                                                                                                                                                      <  2:236055/274‑1 (MQ=255)                                                                  ttCTTGCTGTGGAATGGCTGGACAGCCGCTTACTTTGGGATGCACATGAGTCAGGAAACGCCCGCTTCGACGACTGAAGCGCAGATTAAAAATAAACGCCGTATCTCACCTTTCTGGCTGCTGCCGTTCATCGCGCTAATGATTGCCAGTTGGCTGATTTGGGACAGTTATCAGGACCGGGGTAATACCGTCACCATCGACTTTATGTCGGCGGATGGTATTGTTCCAGGCCGTACGCCTGTTCGTTATCAGGGCGTTGAAGTCGGAACAGTGCa                                                                                                                                                                                   <  1:184658/275‑1 (MQ=255)                                                                  ttCTTGCTGTGGAATGGCTGGACAGCCGCTTACTTTGGGATGCACATGAGTCAGGAAACGCCCGCTTCGACGACTGAAGCGCAGATTAAAAATAAACGCCGTATCTCACCTTTCTGGCTGCTGCCGTTCATCGCGCTAATGATTGCCAGTTGGCTGATTTGGGACAGTTATCAGGACCGGGGTAATACCGTCACCATCGACTTTATGTCGGCGGATGGTATTGTTCAAGGCGGTACGCCTGTTCGTTATCAGGGCGTTGAAGTCGTAACAGTgaa                                                                                                                                                                                   >  1:415883/1‑273 (MQ=255)                                                                                                     tGGGATGCACATGAGTCAGGAAACGCCCGCTTCGACGACTGAAGCGCAGATTAAAAATAAACGCCGTATCTCACCTTTCTGGCTGCTGCCGTTCATCGCGCTAATGATTGCCAGTTGGCTGATTTGGGACAGTTATCAGGACCGGGGTAATACCGTCACCATCGACTTTATGTCGGCGGATGGTATTGTTCCAGGCCGTACGCCTGTTCGTTATCAGGGCGTTGAAGTCGGAAc                                                                                                                                                                                         >  2:662156/1‑234 (MQ=255)                                                                                                         aTGCACATGAGTCAGGAAACGCCCGCTTCGACGACTGAAGCGCAGATTAAAAATAAACGCCGTATCTCACCTTTCTGGCTGCTGCCGTTCATCGCGCTAATGATTGCCAGTTGGCTGATTTGGGACAGTTATCAGGACCGGGGTAATACCGTCACCATCGACTTTATGTCGGCGGATGGTATTGTTCCAGGCCGTACGCCTGTTCGTTATCAGGGCGTTGAAGTCGGAACAGTg                                                                                                                                                                                     <  1:662165/234‑1 (MQ=255)                                                                                                                   cattgtccagccgatatttcggttgggtatcgagtgcgacaaagtgatcctgctctttacctttacccggcatcatgccgatatagttcccaccgacgagggcgtccagcccggagacacctgccaacgatgcttttggCGTCACCATCGACTTTATGTCGGCGGATGGTATTGTTCCAGGCCGTACGCCTGTTCGTTATCAGGGCGTTGAAGTCGGa                                                                                                                                                                                           <  2:443173‑M1/79‑1 (MQ=255)                                                                                                                      aGGAAACGCCCGCTTCGACGACTGAAGCGCAGATTAAAAATAAACGCCGTATCTCACCTTTCTGGCTGCTGCCGTTCATCGCGCTAATGATTGCCAGTTGGCTGATTTGGGACAGTTATCAGGACCGGGGTAATACCGTCa                                                                                                                                                                                                                                                                     >  1:402958/1‑141 (MQ=255)                                                                                                                       gtccagccgatatttcggttgggtatcgagtgcgacaaagtgatcctgctctttacctttacccggcatcatgccgatatagttcccaccgacgagggcgtccagcccggagacacctgccaacgatgcttttggCGTCACCATCGACTTTATGTCGGCGGATGGTATTGTTCCAGGCCGTACGCCTGTTCGTTATCAGGGCGTTGAAGTCGGAACAg                                                                                                                                                                                       >  1:443180‑M1/136‑218 (MQ=255)                                                                                                                          aaCGCCCGCTTCGACGACTGAAGCGCAGATTAAAAATAAACGCCGTATCTCACCTTTCTGGCTGCTGCCGTTCATCGCGCTAATGATTGCCAGTTGGCTGATTTGGGACAGTTATCAGGACCGGGGTAATACCGTCACCAt                                                                                                                                                                                                                                                                 <  2:402951/141‑1 (MQ=255)                                                                                                                           aggCCCGATTCGACGACTGAAGCGCAGATTAAAAATAAACGACGTATCTCACCTGTCTGGCGGCGGCCGTTCATCGCGCTAATGATTGCCAGTTGGCTGATTTGGGACAGGTATCAGGACCGGGGTAAGACCGTCACCATCGACGTGAGGTCGGCGGATGGTATTGTTCCAGGCCGTACGCCTGTTCGTTATCAGGGCGTTGAAGTCGGAACAGTGCAGGATATCAGCCTCAGCGACGATCTTCGTAAGATTGAAGTCAAGGTCAGCATCAAGTc                                                                                                                          <  1:82781/273‑1 (MQ=255)                                                                                                                             gCCCGCTTCGACGACTGAAGCGCAGATTAAAAATAAACGCCGTATCTCACCTTTCTGGCTGCTGCCGTTCATCCCGCTAATGATTGGCAGACGGCTGATTTGGGACATTTATCAGGACCGGGGTAATACCGTCAc                                                                                                                                                                                                                                                                    >  2:203738/1‑135 (MQ=255)                                                                                                                                 gCTTCGACGACTGAAGCGCAGATTAAAAATAAACGCCGTATCTCACCTTTCTGGCTGCTGCCGTTCATCGCGCTAATGATTGCCAGTTGGCTGATTTGGGACAGTTATCAGGACCGGGGTAATACCGTCACCATc                                                                                                                                                                                                                                                                <  1:203742/135‑1 (MQ=255)                                                                                                                                                       cgacaaagtgatcctgctctttacctttacccggcatcatgccgatatagttcccaccgacgagggcgtccagcccggagacacctgccaacgatgcttttggCGTCACCATCGACTTTATGTCGGCGGATGGTATTGTTCCAGGCCGTACGCCTGTTCGTTATCAGGGCGTTGAAGTCGGAACAGTGCAGGATATCAGCCTCAGCGACGATCTTCGTa                                                                                                                                                      <  2:258106‑M1/116‑1 (MQ=255)                                                                                                                                                           aaagtgatcctgctctttacctttacccggcatcatgccgatatagttcccaccgacgagggcgtccagcccggagacacctgccaacgatgcttttggCGTCACCATCGACTTTATGTCGGCGGATGGTATTGTTCCAGGCCGTACGCCTGTTCGTTATCAGGGCGTTGAAGTCGGAACAGTGCAGGATATCAGCCTCAGCGACGATCTTCGTAAGAt                                                                                                                                                  >  1:258111‑M1/100‑219 (MQ=255)                                                                                                                                                                aaCGCCGTATCTCACCTTTCTGGCTGCTGCCGTTCATCGCGCTAATGATTGCCAGTTGGCTGATTTGGGACAGTTATCAGGACCGGGGTAATACCGTCACCATCGACTTTATGTCGGCGGATGGTATTGTTCCAGGCCGTa                                                                                                                                                                                                                           >  1:76592/1‑141 (MQ=255)                                                                                                                                                                aaCGCCGTATCTCACCTTTCTGGCTGCTGCCGTTCATCGCGCTAATGATTGCCAGTTGGCTGATTTGGGACAGTTATCAGGACCGGGGTAATACCGTCACCATCGACTTTATGTCGGCGGATGGGATTGTTCCAGGCCGTa                                                                                                                                                                                                                           >  2:203633/1‑141 (MQ=255)                                                                                                                                                                aaCGCCGTATCTCACCTTTCTGGCTGCTGCCGTTCATCGCGCTAATGATTGCCAGTTGGCTGATTGGGGACAGTGATCAGGACCGGGGTAATACCGTCACCATCGACTTTAGGTCTGCGGAt                                                                                                                                                                                                                                              >  1:358808/1‑122 (MQ=255)                                                                                                                                                                    ccGTATCTCACCTTTCTGGCTGCTGCCGTTCATCGCGCTAATGATTGCCAGTTGGCTGATTTGGGACAGTTATCAGGACCGGGGTAATACCGTCACCATCGACTTTATGTCGGCGGATGGTATTGTTCCAGGCCGTACGcc                                                                                                                                                                                                                       <  1:203637/141‑1 (MQ=255)                                                                                                                                                                    ccGTATCTCACCTTTCTGGCTGCTGCCGTTCATCGCGCTAATGATTGCCAGTTGGCTGATTTGGGACAGTTATCAGGACCGGGGTAATACCGTCACCATCGACTTTATGTCGGCGGATGGTATTGTTCCAGGCCGTACGcc                                                                                                                                                                                                                       <  2:76591/141‑1 (MQ=255)                                                                                                                                                                     cGTATCTCACCTTTCTGGCTGCTGCCGTTCATCGCGCTAATGATTGCCAGTTGGCTGATTTGGGACAGTTATCAGGACCGGGGTAATACCGTCACCATCGACTTTATGTCGGCGGATGGTATTGTTCCAGGCCGTACGCCTGTTCGTTATCAGGGCGTTGAAGTCGGAACAGTGCAGGATATCAGCCTCAGCGACGATCTTCGTAAGATTGAAGTCAAGGTCAGCATCAAGTCCg                                                                                                                        >  2:55470/1‑235 (MQ=255)                                                                                                                                                                         tctcACCTTTCTGGCTGCTGCCGTTCATCGCGCTAATGATTGCCAGTTGGCTGATTTGGGACAGTTATCAGGACCGGGGTAATACCGTCACCATCGACTTTATGTCGGCGGATGGTATTGTTCCAGGCCGTACGCCTGTTCGTTATCAGGGCGTTGAAGTCGGAACAGTGCAGGATATCAGCCTCAGCGACGATCTTCGTAAGATTGAAGTCAAGGTCAGCATCAAGTCCGatat                                                                                                                    <  1:55470/235‑1 (MQ=255)                                                                                                                                                                               cTTTCTGGCTGCTGCCGTTCATCGCGCTAATGATTGCCAGTTGGCTGATTTGGGACAGTTATCAGGACCGGGGTAATACCGTCACCATCGACTTTATGTCGGCGGATGGTATTGt                                                                                                                                                                                                                                      >  2:345552/1‑115 (MQ=255)                                                                                                                                                                                  tCTGGCTGCTGCCGTTCATCGCGCTAATGATTGCCAGTTGGCTGATTTGGGACAGTTATCAGGACCGGGGTAATACCGTCACCATCGACTTTATGTcgg                                                                                                                                                                                                                                                   >  1:83245/1‑99 (MQ=255)                                                                                                                                                                                   cTGGCTGCTGCCGTTCATCGCGCTAATGATTGCCAGTTGGCTGATTTGGGACAGTTATCAGGACCGGGGTAATACCGTCACCATCGACTTTATGTCGGCGGATGGTATTGTTCCa                                                                                                                                                                                                                                  <  1:345558/115‑1 (MQ=255)                                                                                                                                                                                      gctgctGCCGTTCATCGCGCTAATGATTGCCAGTTGGCTGATTTGGGACAGTTATCAGGACCGGGGTAATACCGTCACCATCGACTTTATGTCGGCGGa                                                                                                                                                                                                                                               <  2:83244/99‑1 (MQ=255)                                                                                                                                                                                        tgctgcCGTTCATCGCGCTAATGATTGCCAGTTGGCTGATTTGGGACAGTTATCAGGACCGGGGTAATACCGTCa                                                                                                                                                                                                                                                                     >  2:712074/1‑75 (MQ=255)                                                                                                                                                                                            gcCGTTCATCGCGCTAATGATTGCCAGTTGGCTGATTTGGGACAGTTATCAGGACCGGGGTAATACCGTCACCAt                                                                                                                                                                                                                                                                 <  1:712084/75‑1 (MQ=255)                                                                                                                                                                                                                                                   cGGGGTAATACCGTCACCATCGACTTTATGTCGGCGGATGGTATTGTTCCAGGc                                                                                                                                                                                                                               >  1:175193/1‑54 (MQ=255)                                                                                                                                                                                                                                                   cGGGGTAATACCGTCACCATCGACTTTATGTCGGCGGATGGTATTGTTCCAGGCCGTACGCCTGTTCGTTATCAGGGCGTTGAAGTCGGAACAg                                                                                                                                                                                       >  2:670052/1‑94 (MQ=255)                                                                                                                                                                                                                                                   cGGGGTAATACCGTCACCATCGACTTTATGTCGGCGGATGGTATTGTTCCAGGCCGTACGCCTGTTCGTTATCAGGGCGTTGAAGTCGGAACAGTGCAGGATATCAGCCTCAGCGACGATCTTCGTAAGATTGAAGTCAAGGTCAGCATCaa                                                                                                                             >  1:86234/1‑152 (MQ=255)                                                                                                                                                                                                                                                   cGGGGTAATACCGTCACCATCGACTTTATGTCGGCGGATGGTATTGTTCCAGGCCGTACGCCTGTTCGTTATCAGGGCGTTGAAGTCGGAACAGTGCAGGATATCAGCCTCAGCGACGATCTTCGTAAGATTGAAGTCAAGGTCAGCATCAAGTCCGATATGAAAGATGCGCTGCGCGAAGAGACTCAGTTCTGGCTGGTGACGCCAAAAGCATCGTTGGCAGGTGTCTCCGGGCTGGACGCCCTCGTCGGTGGGAACTATATCGGCATGATGcc  >  1:39828/1‑275 (MQ=255)                                                                                                                                                                                                                                                       gTAATACCGTCACCATCGACTTTATGTCGGCGGATGGTATTGTTCCAGGCCGTa                                                                                                                                                                                                                           <  2:175190/54‑1 (MQ=255)                                                                                                                                                                                                                                                       gTAATACCGTCACCATCGACTTTATGTCGGCGGATGGTATTGTTCCAGGCCGTACGCCTGTTCGTTATCAGGGCGTTGAAGTCGGAACAGTGCa                                                                                                                                                                                   <  1:670061/94‑1 (MQ=255)                                                                                                                                                                                                                                                       gTAATACCGTCACCATCGACTTTATGTCGGCGGATGGTATTGTTCCAGGCCGTACGCCTGTTCGTTATCAGGGCGTTGAAGTCGGAACAGTGCAGGATATCAGCCTCAGCGACGATCTTCGTAAGATTGAAGTCAAGGTCAGCATCAAGTcc                                                                                                                         <  2:86233/152‑1 (MQ=255)                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                        TCAGATCCTCGCTTTTACTATGGGACCGGCTGCGTTTTATTTCGGCGCAGCGGTAATTTTGACTATTCTTGCTGTGGAATGGCTGGACAGCCGCTTACTTTGGGATGCACATGAGTCAGGAAACGCCCGCTTCGACGACTGAAGCGCAGATTAAAAATAAACGCCGTATCTCACCTTTCTGGCTGCTGCCGTTCATCGCGCTAATGATTGCCAGTTGGCTGATTTGGGACAGTTATCAGGACCGGGGTAATACCGTCACCATCGACTTTATGTCGGCGGATGGTATTGTTCCAGGCCGTACGCCTGTTCGTTATCAGGGCGTTGAAGTCGGAACAGTGCAGGATATCAGCCTCAGCGACGATCTTCGTAAGATTGAAGTCAAGGTCAGCATCAAGTCCGATATGAAAGATGCGCTGCGCGAAGAGACTCAGTTCTGGCTGGTGACGCCAAAAGCATCGTTGGCAGGTGTCTCCGGGCTGGACGCCCTCGTCGGTGGGAACTATATCGGCATGATGCC  >  CP009273/1911657‑1912173

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.