New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | CP009273 | 1912818 = | 29 (0.750) | 10 (0.270) | 6/298 | NT | 26.5% | coding (1052/2634 nt) | yebT | MCE domain protein |
? | CP009273 | 1913093 = | 28 (0.770) | coding (1327/2634 nt) | yebT | MCE domain protein |
GAAGATCTGGCCCACAGCCAGCGTGGCGTAATAATAAAACTGGAACTGCCGAGTGGGGCCGGATTAACCGCCGACTCGACGCCGTTAATGTATCAGGGGCTGGAAGTCGGACAGCTGACTAAACTGGATTTAAATCCTGGTGGTAAAGTCACAGGGGAAATGACCGTTGATCCCAGCGTCGTTACCCTGCTTCGTGAAAATACCCGCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGTGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATGCGGGTCAGCCGCTCATTCTTCACGGCGTGCAGG > CP009273/1912580‑1913018 | cttcactcaaactcacgtttgtgttgggtaaatcgctaaggctgttctccagcgctttttccaaattggcatacagtggatagctggctttcatctcacctttatcgcccggcagaatacgtatcccgccattgatccattctgaggcgctggcaccgagaaactcaacgccatccagccccaccttcacatcgacacggctgttgacgacaaatttgctatcgccttttaccagttcGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAAc > 1:458032‑M1/239‑275 (MQ=255) gcGTGGCGTAATAATAAAACTGGAACTGCCGAGTGGGGCCGGATTAACCGCCGACTCGACGCCGTTAATGTATCAGGGGCTGGAAGTCGGACAGCTGACTAAACTGGATTTAAATCCTGGTGGTAAAGTCACAGGGGAAATGACCGTTGATCCCAGCGTCGTTACCCTGCTTCGTGAAAATACCCGCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGATGCCCGGCg > 1:152322/1‑275 (MQ=255) aCTGGAACTGCCGAGTGGGGCCGGATTAACCGCCGAATCGACGCCGTTAATGAATCAGGGGCTGGAAGTCGGACAGCTGACAAAACTGGANTTAAATCCTGGTGGTAAAGTCACAGGAGAAATGACCGTTGATCCCAGCGTCGTTACCCTGCTTCGTGAAAATACCCGCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAACAGATACCCGGCGATGGCGAGCCACGCaaa < 1:505045/274‑1 (MQ=255) gAACTGCCGAGTGGGGCCGGATTAACCGCCGACTCGACGCCGTTAATGTATCAGGGGCTGGAAGTCGGACAGCTGACTAAACTGGATTTAAATCCTGGTGGTAAAGTCACAGGGGAAATGACCGTTGATCCCAGCGTCGTTACCCTGCTTCGTGAAAATACCCGCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTACTCTCAGCGCCCTGCTCACCGGCAAAACATTCGAGCTGGTGCCCGGCGATGGCGAGCCAAGCAAAGAGtt > 1:211252/1‑275 (MQ=255) ccGAGTGGGGCCGGATTAACCGCCGACTCGACGCCGTTAATGTATCAGGGGCTGGAAGTCGGACAGCTGACTAAACTGGATTTAAATCCTGGTGGTAAAGTCACAGGGGAAATGACCGTTGATCCCAGCGTCGTTACCCTGCTTCGTGAAAATACCCGCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGATGGTGACCGGCGATGGCGAGCCACGCAAAGAGttggacg > 1:24411/1‑269 (MQ=255) aCCGCCGACTCGACGCCGTTAATGTATCAGGGGCTGGAAGTCGGACAGCTGACTAAACTGGATTTAAATCCTGGTGGTAAAGTCACAGGGGAAATGACCGTTGATCCCAGCGTCGATACCCTGCTTCGTGAAAATACCCGCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGATCGTTGTTGTGCCAGGCGAAAAAg > 1:95372/1‑274 (MQ=255) tcatctcacctttatcgcccggcagaatacgtatcccgccattgatccattctgaggcgctggcaccgagaaactcaacgccatccagccccaccttcacatcgacacggctgttgacgacaaatttgctatcgccttttaccagttcg > 2:246402‑M1/149‑149 (MQ=255) ggggCGGCAAGTCGGACAGCTGACGAAGCTGGATTTAAATTCTGGTGGTAAATTCACCGTGGATATGACCGTTGATCCCAGCGTCGTTACCCTGCTTCGTGAAAATACCCGCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCATCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGTGCCACGCAAAGAGTTCGTTGTTGTGCCAGGCGAAAAAGCACTGCTGCATGAAACTGATGTTCTGACg < 2:673299/274‑1 (MQ=255) cTGGAAGTCGGACAGCTGACTAAACTGGATTTAAATCCTGGTGGTAAAGTCACAGGGGAAATGACCGTTGATCCCAGCGTCGTTACCCTGCTTCGTGAAAATACCCGCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGTGCCAGGCGAAAAAGCACTGCTACATGAACCTGCNGTTCTGACCcagac > 2:523960/1‑275 (MQ=255) cTGACTAAACTGGATTTAAATCCTGGTGGTAAAGTCACAGGGGAAATGACCGTTGATCCCAGCGTCGTTACCCTGCTTCGTGAAAATACCCGCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAag > 1:132238/1‑199 (MQ=255) cTAAACTGGATTTAAATCCTGGTGGTAAAGTCACAGGGGAAATGACCGTTGATCCCAGCGTCGTTACCCTGCTTCGTGAAAATACCCGCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGtt < 2:132237/199‑1 (MQ=255) aagngtgtttAAATCCTGTTTGTAAAGTAACAGGGGAAATGACCGCGGATCCCAGCTTTGTTTCCCTGCTGCGTGAAAATACCCGCATAGAATTACGCAACACGAGATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGGGCCGGGGGATGGCGAGCAACGCAAAGAGTTCCTTGTTGTGCCAGGCGAAACAGCACTGCTGCATGAACCTGATGTTCTGGCGCTGACCCTGACCGCGCCGGAAAGTTa < 2:152319/267‑1 (MQ=255) aCTGGATTTAAATCCTGGTGGTAAAGTCACAGGGGAAATGACCGTTGATCCCAGCGTCGTTACCCTGCTTCGTGAAAATACCCGCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGAGTCCTGCTGACCGGCAAAAACTTCGAGCTGGTGCACGGCGATGGCGAGCAACGCAAAGAGTTCGTTGTTGTGCCAGGCGAAAAAGCAATGAGGCATGAACGTGATGTTCTGACGCTGACCATGACCGCGCCGGAAAgcaacg > 1:148550/1‑270 (MQ=255) attctgaggcgctggcaccgagaaactcaacgccatccagccccaccttcacatcgacacggctgttgacgacaaatttgctatcgccttttaccagttcGCGATGCTAATCTCAGCGCCCTGCTGACCg < 1:6059‑M1/30‑1 (MQ=255) attctgaggcgctggcaccgagaaactcaacgccatccagccccaccttcacatcgacacggctgttgacgacaaatttgctatcgccttttaccagttcGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGc < 2:525926‑M1/56‑1 (MQ=255) attctgaggcgctggcaccgagaaactcaacgccatccagccccaccttcacatcgacacggctgttgacgacaaatttgctatcgccttttaccagttcGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGttgttg < 2:326992‑M1/87‑1 (MQ=255) attctgaggcgctggcaccgagaaactcaacgccatccagccccacattcacatcgacacggctgttgacgacaaatttgctatcgccttttaccagttcGCGATGCTAATCTCCGCGCCCTGCTGACCGGCAACACCTTCGAGCTGGTGCCCGGCGATg < 2:588949‑M1/60‑1 (MQ=255) gtggtAAAGTCACAGGGGAAATGACCGTTGATCCCAGCGTCGTTACCCTGCTTCGTGAAAATACCCGCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGTGCCAGGCGAAAAAGc > 2:241673/1‑202 (MQ=255) tgaggcgctggcaccgagaaactcaacgccatccagccccaccttcacatcgacacggctgttgacgacaaatttgctatcgccttttaccagttcGCGATGCTAATCTCAGCGCCCTGCTGACCGGCaa > 2:6059‑M1/97‑130 (MQ=255) tgaggcgctggcaccgagaaactcaacgccatccagccccaccttcacatcgacacggctgttgacgacaaatttgctatcgccttttaccagttcGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATg > 1:525933‑M1/97‑156 (MQ=255) tgaggcgctggcaccgagaaactcaacgccatccagccccaccttcacatcgacacggctgttgacgacaaatttgctatcgccttttaccagttcGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGTGcc > 1:326998‑M1/97‑187 (MQ=255) tgaggcgctggcaccgagaaactcaacgccatacagccccaccttcacatcgacacggctgttgacgacaaatttgctatcgccttttaccagttcGCGATGCTAATCTCAGCGCCCTGCGGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGTGcc > 1:260356‑M1/97‑187 (MQ=255) tgaggcgctcgcaccgagaaactcaacgccatccagccccaccttcacatcgacacggctgtttacgacaaatttgctatcgcctttttccagtccGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGATGGTGCCCGGCGATGGCGa > 1:588958‑M1/97‑160 (MQ=255) tAAAGTCACAGGGGAAATGACCGTTGATCCCAGCGTCGTTACCCTGCTTCGTGAAAATACCCGCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGTGCCAGGCGAAAAAGCActg < 1:241678/202‑1 (MQ=255) cacaGGGGAAATGACCGTTGATCCCAGCGTCGTTACCCTGCTTCGTGAAAATACCCGCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGTGCCAGGCGaa > 2:659552/1‑187 (MQ=255) ggggAAATGACCGTTGATCCCAGCGTCGTTACCCTGCTTCGTGAAAATACCCGCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGTGCCAGGCGAAAAAg < 1:659561/187‑1 (MQ=255) cGTTGATCCCAGCGTCGTTACCCTCCTTGGTGAAAATACCCGCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGTGCCAGGCGAAAAAGCACTGCTNCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGCAAGTTACGGTATTGATGCGGGTCAGCCGCTCATTCTTCACGGCGTGCCgg > 1:505813/1‑275 (MQ=255) cGTCGATCCCAGCCTCGTTACACTGCTTCGTGAAAATACCCGCTTCGCCTTACGCAACCCGAAATTCTCCCTTAGCGATGCTAATCGCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGTGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATGCGGGTCAGCCGCTCATTCTTCACGGCGTGCAgg < 2:221616/275‑1 (MQ=255) ttACCCTGCTTCGTGAAAATACCCGCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGTGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGaaa > 1:249045/1‑210 (MQ=255) ttACCCTGCTTCGTGAAAATACCCGCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGTGACAGGCGAAAAAGc > 1:667884/1‑160 (MQ=255) aCCCTGCTTCGTGAAAATACCCGCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATg > 2:344518/1‑115 (MQ=255) ccTGCTTCGTGAAAATACCCGCCTCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGTGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTa < 2:249040/210‑1 (MQ=255) ccTGCTTCGTGAAAATACCCGCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGc > 1:595727/1‑115 (MQ=255) ccTGCTTCGTGAAAATACCCGCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGTGCCAGGCGAAAAAGCActg < 2:667875/160‑1 (MQ=255) tGCTTCGTGAAAATACCCGCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGa < 1:344524/115‑1 (MQ=255) acatcgacacggctgttgacgacaaatttgctatcgccttttaccagttcGCGa < 1:571064‑M1/4‑1 (MQ=255) cTTCGTGAAAATACCCGCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGc < 2:595718/115‑1 (MQ=255) cgacacggctgttgacgacaaatttgctatcgccttttaccagttcGCGATGCt > 2:571055‑M1/47‑54 (MQ=255) tGAAAATACCCGCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAag > 1:54796/1‑119 (MQ=255) aaTACCCGCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGtt < 2:54796/119‑1 (MQ=255) cccGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGTGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCgcgc > 2:67116/1‑164 (MQ=255) aaaTTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGTGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGa < 1:67117/164‑1 (MQ=255) | GAAGATCTGGCCCACAGCCAGCGTGGCGTAATAATAAAACTGGAACTGCCGAGTGGGGCCGGATTAACCGCCGACTCGACGCCGTTAATGTATCAGGGGCTGGAAGTCGGACAGCTGACTAAACTGGATTTAAATCCTGGTGGTAAAGTCACAGGGGAAATGACCGTTGATCCCAGCGTCGTTACCCTGCTTCGTGAAAATACCCGCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGTGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATGCGGGTCAGCCGCTCATTCTTCACGGCGTGCAGG > CP009273/1912580‑1913018 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |