New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	2676188 =	43 (1.120)	5 (0.140)	4/296	NT	13.8%	intergenic (‑84/‑34)	yphG/yphH	DUF4380 domain‑containing TPR repeat protein/putative DNA‑binding transcriptional regulator
	?	CP009273	2676276 =	22 (0.610)					coding (55/1194 nt)	yphH	putative DNA‑binding transcriptional regulator

TCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTTGTGGCAGTGTATTGAACAATCTGGCAATGTTTTCGCGGAATAATCACGCAATTAACTAAACAAGGTTTAGTGAAGATGAGAGCCTGCATTAATAATCAACAGATTCGCCACCATAACAAATGCGTGATTCTGGAACTGCTGTACCGGCAAAAGCGCGCCAATAAATCAACGCTGGCCCGGCTGGCGCAAATTTCGATTCCGGCAGTCAGTAATATTTTGCAGGAACTGGAAAGCGAAAAACGGGTGGTGAATATTGACGATGAAAGCCAGACGCGCGGGCATAGTAGCGGTACATGGCTGATTGCGCCGGAA  >  CP009273/2675969‑2676458                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                               ggtgggcgtcacgttcaggcacagcgtccagtcaccttccggcgcaatcagccatgtaccgctactatgcccgcgcgtctggctttcatcgtcaatattcaccacccgtttttcgctttccagttcctgcaaaatattactgactgccggaatcgaaatttgcgccagccgggccagcgttgatttattggcgcgcttttgccggtacagcagttccaga                                                                                                                                                                                                                                                                                <  1:576411‑M1/1‑1 (MQ=255)         tAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTTGTGGCAGTGTATTGAACAATCTGGCAATGTTTTCGCGGAATAATCACGCAATTAACTAAACAAGGTTTAGTGAAGATAAGAGCATGAATTAATAATCAACAGAtt                                                                                                                                                                                                                 >  1:332828/1‑275 (MQ=255)                                      aTAAACGCGATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGGTGTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATGTGTGGCAGTGTATTGAACAATCTGGCAATGTTTTCGCGGAATAATCACGCAATTAACTAAACAAGGTTAAGTGAAGATGAGAGCCGGCGTTGATCATCAACAGATTCTACCACATAAGAAAtatattaatgtata                                                                                                                                                                                    >  2:387916/1‑262 (MQ=255)                                           cgcgATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTTGTGGCAGTGTATTGAACAATCTGGCAATGTTTTCGCGGAATAATCAAGCAATTAACTAAACAAGGTTTAGTGAAGATGAGAGCCTGAATTAATAATCAAAAGATTCGCCACCATAAAAACTGAGTAATTATgaattgg                                                                                                                                                                                >  2:621557/1‑268 (MQ=255)                                                                  tGTATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTTGTGGCAGTGTATTGAACAATCTGGCAATGTTTTAGCGGAATAATCACGCAATTAACTAAACAAGGTTTAGTGAAGATGAGAGCCTGAATTAAAAATAAAAAGATTCGCCACCATAAAAAAAGCGGGATACAGGAACTTCTGTCCCGGNnaaactattaactc                                                                                                                                                        >  2:538191/1‑265 (MQ=255)                                                                           tGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTTGTGGCAGTGTATTGAACAATCTGGCAATGTTTTCGCGGAATAATCACGNAATTAACTAAACAAGGTTTAGTGAAGATGAGAGCCTGCATTAATAATCAACAGATTCGCAACCATAACAAATGCGTGATTCTGGAACTGCTGTACCGGCAAAAGCGCGCCAATAAATCAACg                                                                                                                                               >  1:605731/1‑275 (MQ=255)                                                                                            tcaatattcaccacccgtttttcgctttccagttcctgcaaaatattactgactgccggaatcgaaatttgcgccagccgggccagcgttgatttattggcgcgcttttgccggtacagcagttccagAATCACGCAATTAACTAAACAAGGTTTAGTGAAGATGAGAGCCTGCATTAATAATCAACAGAtt                                                                                                                                                                                                                 <  1:205155‑M1/64‑1 (MQ=255)                                                                                                    caccacccgtttttcgctttccagttcctgcaaaatattactgactgccggaatcgaaatttgcgccagccgggccagcgttgatttattggcgcgcttttgccggtacagcagttccagAATCACGCAATTAACTAAACAAGGTTTAGTGAAGATGAGAGCCTGCATTAATAATCAACAGAtt                                                                                                                                                                                                                 <  1:700635‑M1/64‑1 (MQ=255)                                                                                                       cAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTTGTGGCAGTGTATTGAACAATCTGGCAATGTTTTCGCGGAATAATCACGCAATTAACTAAACAAGGtt                                                                                                                                                                                                                                                       >  1:5599/1‑143 (MQ=255)                                                                                                        acccgtttttcgctttccagttcctgcaaaatattactgactgccggaatcgaaatttgcgccagccgggccagcgttgatttattggcgcgcttttgccggtacagcagttccagAATCACGCAATTAACTAAACAAGGTTTAGTGAAGATGAGAGCCTGCATTAATAATCAACAGATTCGcc                                                                                                                                                                                                             >  2:700626‑M1/117‑184 (MQ=255)                                                                                                           gcgcTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTTGTGGCAGTGTATTGAACAATCTGGCAATGTTTTCGCGGAATAATCACGCAATTAACTAAACAAGGTTTAGt                                                                                                                                                                                                                                                   <  2:5599/143‑1 (MQ=255)                                                                                                            ctcttttGCCACAATTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTTGTGGCAGTGTATTGAACAATCTGGCAATGTTTTCGCGGAATAATCACGCAGTTAACTAAACAAGGTTTAGTGAAGATGAGAGCCTGCATTAATAATCAACAGATTCGCCACCATAACAAATGCGTGATTCT‑GAACTGCTGTACCGGCAAAAGCGCGCCAATAAATCAACGCTGGCCCGGCTGGCGCAAATTTCGATTCCGGca                                                                                                              <  1:621566/269‑1 (MQ=255)                                                                                                               agagaaagcanTTTTAATGGAGTAATGGTGCCCTCAATATTAACATGACATAATGAATTAAAAGATTTTTGGCAGTGTATTGAACAATCTGGCAATGTTTTCGCGGAATAATCACGCAATTAACTAAACAAGGTTTAGTGAAGATGAGAGCCTGCATTAATAATCAACAGATTCGCCACCATAACAAATGCGTGATTCTGGAACTGCTGTACCGGCAAAAGCGCGCCAATAAATCAACGCTGGCCCGGCTGGCGCAAATTTCGATTCCGGcagt                                                                                                            <  2:66584/266‑1 (MQ=255)                                                                                                                             tACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTTGTGGCAGTGTATTGAACAATCTGGCAATGTTTTCGCGGAATAATCACGCAATTAACTAAACAAGGTTTAGTGAAGATGAGAGCCTGCATTAATAATCAACAGATTCGCCACCATAACAAATGCGTGATTCTGGAACTGCTGTACCGGCAAAAGAGCGCAAATAAACAAACACTGTCACGGCAGGCGCAAATATCGTATCCGCCATGCATTATTAtttttta                                                                                             >  2:550910/1‑272 (MQ=255)                                                                                                                             tACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTTGTGGCAGTGTATTGAACAATCTGGCAATGTTTTCGCGGAATAATCACGCAATTAACTAAACAAGGTTTAGTGAAGATGAGAGCCTGCATTAATAATCAACAGATTCGCCACCATAAAAAATGCGTGATTCTGGAACTGCTGTACCGGCAAAAGCGCGCCAATAAATCAACGCTGGCCCGGCTGGCGCAAAGTTCGATTCAGGCAGTCAGTANAAtttgcca                                                                                             >  2:276376/1‑271 (MQ=255)                                                                                                                               cTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTTGTGGCAGTGTATTGAACAATCTGGCAATGTTTTCGCGGAATAATCACGCAATTAACTAAACAAGGTTTAGTGAAGATGAGAGCCTGCATTAATAATCAACAGATTCGCCACCATAACAAATGCGTGATTCTGGAACTGCTGTACCGGCAAAAGCGCGCCAATAAATCAACGCTGGCCCGGCTGGCGCCAATTTCGATTCCGGCAGTCAGTAatat                                                                                                   <  1:410788/267‑1 (MQ=255)                                                                                                                                  gAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTTGTGGCAGTGTATTGAACAATCTGGCAATGTTTTCGCGGAATAATCACGCAATTAACTAAACAAGGTTTAGTGAAGATGAGAGCCTGCATTAATAATCAACAGATTCGCCACCATAACAAATGCGTGATTCTGGAACTGCTGTACCGGCAAAAGCGCGCCAATAAATCAACGCTGGCCCGGCTGGCGCAAATTTCGATTCCgg                                                                                                                >  1:66585/1‑251 (MQ=255)                                                                                                                                             cccTCAATATTAACAAGACATACTGAATTAAAAGATTTGTGGCAGTGTATTGAACAATCTGGCAATGTTTTCGCGGAATAATCACGCAATTAACTAAACAAGGTTTAGTGAAGATGAGAGCCTGCATTAATAATCAACAGATTCGCCACCATAACAAATGCGTGATTCTGGAACTGCTGTACCGGCAAAAGCGCGCCAATAAATCAACGCTGGCCCGGCTGGCGCAAATTTCGATTCCGGCAGTCAAGAATATTTTGCAGGAACTGGAAAGCTaa                                                                             >  2:224706/1‑275 (MQ=255)                                                                                                                                                         aCAAGACATACTGAATTAAAAGATTTGTGGCAGTGTATTGAACAATCTGGCAATGTTTTCGCGGAATAATCACGCAATTAACTAAACa                                                                                                                                                                                                                                                            >  1:386545/1‑88 (MQ=255)                                                                                                                                                            aGACATACTGAATTAAAAGATTTGTGGCAGTGTATTGAACAATCTGGCAATGTTTTCGCGGAATAATCACGCAATTAACTAAACaa                                                                                                                                                                                                                                                           >  1:413011/1‑86 (MQ=255)                                                                                                                                                            aGACATACTGAATTAAAAGATTTGTGGCAGTGTATTGAACAATCTGGCAATGTTTTCGCGGAATAATCACGCAATTAACTAAACAAGGTTTAGTGAAGATgag                                                                                                                                                                                                                                          >  1:534605/1‑103 (MQ=255)                                                                                                                                                            aGACATACTGAATTAAAAGATTTGTGGCAGTGTATTGAACAATCTGGCAATGTTTTCGCGGAATAATCACGCAATTAACTAAACAAGGTTTAGTGAAGATGAGAGCCt                                                                                                                                                                                                                                     >  1:396131/1‑108 (MQ=255)                                                                                                                                                             gACATACTGAATTAAAAGATTTGTGGCAGTGTATTGAACAATCTGGCAATGTTTTCGCGGAATAATCACGCAATTAACTAAACAAGGt                                                                                                                                                                                                                                                        <  2:386539/88‑1 (MQ=255)                                                                                                                                                              aCATACTGAATTAAAAGATTTGTGGCAGTGTATTGAACAATCTGGCAATGTTTTCGCGGAATAATCACGCAATTAACTAAACAAGGTTTAGTGAAGATGAGAGCCTGCATTAATAATCAACAGAtt                                                                                                                                                                                                                 >  2:529722/1‑126 (MQ=255)                                                                                                                                                                aTACTGAATTAAAAGATTTGTGGCAGTGTATTGAACAATCTGGCAATGTTTTCGCGGAATAATCACGCAATTAACTAAACAAGGtt                                                                                                                                                                                                                                                       <  2:413004/86‑1 (MQ=255)                                                                                                                                                                aTACTGAATTAAAAGATTTGTGGCAGTGTATTGAACAATCTGGCAATGTTTTCGCGGAATAATCACGCAATTAACTAAACAAGGTTTAGTGAAGATGAGAGcc                                                                                                                                                                                                                                      <  2:534597/103‑1 (MQ=255)                                                                                                                                                                aTACTGAATTAAAAGATTTGTGGCAGTGTATTGAACAATCTGGCAATGTTTTCGCGGAATAATCACGCAATTAACTAAACAAGGTTTAGTGAAGATGAGAGCCTGCAt                                                                                                                                                                                                                                 <  2:396124/108‑1 (MQ=255)                                                                                                                                                                  aCTGAATTAAAAGATTTGTGGCAGTGTATTGAACAATCTGGCAATGTTTTCGCGGAATAATCACGCAATTAACTa                                                                                                                                                                                                                                                                >  1:104574/1‑75 (MQ=255)                                                                                                                                                                  aCTGAATTAAAAGATTTGTGGCAGTGTATTGAACAATCTGGCAATGTTTTCGCGGAATAATCACGCAATTAACTAAACAAGGTTTAGTGAAGATGAGAGCCTGCATTAATAATCAACAGATTCGcc                                                                                                                                                                                                             <  1:529730/126‑1 (MQ=255)                                                                                                                                                                     gAATTAAAAGATTTGTGGCAGTGTATTGAACAATCTGGCAATGTTTTCGCGGAATAATCACGCAATTAACTAAACAAGGTTTAGTGAAGATGAGAGCCTGCATTAATAATCAACAGATTCGCCACCATAACAAATGCGTGATTCTGGAACTGCTGTACCGGCAAAAGCGCGCCAATAAATCAACGCTGGCCCGGCTGGCGCAAATTTCGATTcc                                                                                                                  >  2:206770/1‑214 (MQ=255)                                                                                                                                                                      aaTTAAAAGATTTGTGGCAGTGTATTGAACAATCTGGCAATGTTTTCGCGGAATAATCACGCAATTAACTAAACa                                                                                                                                                                                                                                                            <  2:104573/75‑1 (MQ=255)                                                                                                                                                                         tAAAAGATTTGTGGCAGTGTATTGAACAATCTGGCAATGTTTTCGCGGAATAATCACGCAATTAACTAAACAAGGTTTAGTGAAGATGAGAGCCTGCATTAATAATCAACAGATTCGCCACCATAACAAATGCGTGATTCTGGAACTGCTGTACCGGCAAAAGCGCGCCAATAAATCAACGCTGGCCCGGCTGGCGCAAATTTCGATTCCGGca                                                                                                              <  1:206774/214‑1 (MQ=255)                                                                                                                                                                           aaaGATTTGTGGCAGTGTATTGAACAATCTGGCAATGTTTTCGCGGAATAATCACGCAATTAACTAAACAAgg                                                                                                                                                                                                                                                         >  1:550870/1‑73 (MQ=255)                                                                                                                                                                               aTTTGTGGCAGTGTATTGAACAATCTGGCAATGTTTTCGCGGAATAATCACGCAATTAACTAAACAAGGTTTa                                                                                                                                                                                                                                                     <  2:550861/73‑1 (MQ=255)                                                                                                                                                                                tttGTGGCAGTGTATTGAACAATCTGGCAATGTTTTCGCGGAATAATCACGCAATTAACTAAACaa                                                                                                                                                                                                                                                           >  1:445561/1‑66 (MQ=255)                                                                                                                                                                                   gttgatttattggcgcgcttttgccggtacagcagttccagAATCACGCAATTAACTAAACAAGGTTTAGTGAAGATGAGAGCCTGCATTAATAATCAACAGAtt                                                                                                                                                                                                                 <  1:351929‑M1/64‑1 (MQ=255)                                                                                                                                                                                    tgGCAGTGTATTGAACAATCTGGCAATGTTTTCGCGGAATAATCACGCAATTAACTAAACAAGGtt                                                                                                                                                                                                                                                       <  2:445554/66‑1 (MQ=255)                                                                                                                                                                                       atttattggcgcgcttttgccggtacagcagttccagAATCACGCAATTAACTAAACAAGGTTTAGTGAAGATGAGAGCCTGCATTAATAATCAACAGATTCGcc                                                                                                                                                                                                             >  2:351923‑M1/38‑105 (MQ=255)                                                                                                                                                                                          tgtATTGAACAATCTGGCAATGTTTTCGCGGAATAATCACGCAATTAACTAAACAAGGTTTAGTGAAGATGAGAGCCTGCATTAATAATCAACAGATTCGccacca                                                                                                                                                                                                         >  2:19412/1‑106 (MQ=255)                                                                                                                                                                                              ttGAACAATCTGGCAATGTTTTCGCGGAATAATCACGCAATTAACTAAACAAGGTTTAGTGAAGATGAGAGCCTGCATTAATAATCAACAGATTCGCCACCATAAc                                                                                                                                                                                                     <  1:19412/106‑1 (MQ=255)                                                                                                                                                                                                 aaaaaTCTGGCAATGTTTTCGCGGAATAATCACGCAATTAACTAAACAAGGTTTAGTGAAGATGAGAGCCTGCATTAATAATCAACAGATTCGCCACCATAACAAATGCGTGATTCTGGAACTGCTGTACCGGCAAAAGCGCGCCAATAAATCAACGCTGGCCCGGCTGGCGCAAATTTCGATTCCGGCAGTCAGTAATATTTTGCAGGAACTGGAAAGCGAAAAACGggtggt                                                                  <  1:71259/231‑1 (MQ=255)                                                                                                                                                                                                 aaCAATCTGGCAATGTTTTCGCGGAATAATCACGCAATTAACTAAACAAGGTTTAGTGAAGATGAGAGCCTGCATTAATAATCAACAGATTCGCCACCATAACAAATGCGTGATTCTGGAACTGCTGTACCGGCAAAAGCGCGCCAATAAATCAACGCTGGCCCGGCTGGCGCAAATTTCGATTCCGGCAGTCAGTAATATTTTGCAGGAACTGGAAAGCGAAAAAAGggtggt                                                                  >  2:71258/1‑234 (MQ=255)                                                                                                                                                                                                      tCTGGCAATGTTTTCGCGGAATAATCACGCAATTAACTAAACaa                                                                                                                                                                                                                                                           >  1:182462/1‑44 (MQ=255)                                                                                                                                                                                                      tCTGGCAATGTTTTCGCGGAATAATCACGCAATTAACTAAACAAGGTTTAGTGAAGAt                                                                                                                                                                                                                                             >  2:194283/1‑58 (MQ=255)                                                                                                                                                                                                      tCTGGCAATGTTTTCGCGGAATAATCACGCAATTAACTAAACAAGGTTTAGTGAAGATGAGAGCCTGCATTAATAATCAACAGATTCGCCACCATAACAAATGCGTGATTCTGGAACTGCTGTACCGGCAAAAGCGCGCCAATAAATCAACGCTGGCCCGGCTGGCGCAAATTTCGATTCCGGCAGTCAGTAATATTTTGCAGGAACTGGAAAGCGaaaa                                                                           >  1:87047/1‑220 (MQ=255)                                                                                                                                                                                                      tCTGGCAATGGTTTCGCGGAATAATCACGCAATTAACTAAACAAGGTTTAGTGAATATTAGAGCCTGCATTAATACTCAACAGATTCGCCACCATAACAAATGCGTGATTCTGGAACTGCTGTACCGGCAAAAGCGCGCCAATAAATCAACACTGGCCCGGCTGGCGCAAATTTCGATTCCGGCAGTCAGTAACATTTTGCCGGAACTGGAAAGCGAAAAACGGGGGGAGAATATGGACGAGGAAAGCCAAAAGCGCAGGCAtattttttttt                      >  2:591975/1‑264 (MQ=255)                                                                                                                                                                                                          gCAATGTTTTCGCGGAATAATCACGCAATTAACTAAACAAGGtt                                                                                                                                                                                                                                                       <  2:182459/44‑1 (MQ=255)                                                                                                                                                                                                          gCAATGTTTTCGCGGAATAATCACGCAATTAACTAAACAAGGTTTAGTGAAGATgaga                                                                                                                                                                                                                                         <  1:194286/58‑1 (MQ=255)                                                                                                                                                                                                          gCAATGTTTTCGCGGAATAATCACGCAATTAACTAAACAAGGTTTAGTGAAGATGAGAGCCTGCATTAATAATCAACAGATTCGCCACCATAACAAATGCGTGATTCTGGAACTGCTGTACCGGCAAAAGCGCGCCAATAAATCAACGCTGGCCCGGCTGGCGCAAATTTCGATTCCGGCAGTCAGTAATATTTTGCAGGAACTGGAAAGCGAAAAACgg                                                                       <  2:87046/220‑1 (MQ=255)                                                                                                                                                                                                                         aataatCACGCAATTAACTAAACAAGGTTTAGTGAAGATGAGAGCCTGCATTAATAATCAACAGATTCGCCACCATAACAAATGCGTGATTCTGGAACTGCTGTACCGGCAAAAGCGCGCCAATAAATCAACGCTGGCCCGGCTGGCGCAAATTTCGATTCCGGCAGTCAGTAATATTTTGCAGGAACTGGAAAGCGAAAAACGGGTGGTGAATATTGACGATGAAAGCCAGACGCGCGGGCATAGTAGCGGTACATGGCTGATTGCGCCGGaa  <  1:224711/274‑1 (MQ=255)                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                               TCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTTGTGGCAGTGTATTGAACAATCTGGCAATGTTTTCGCGGAATAATCACGCAATTAACTAAACAAGGTTTAGTGAAGATGAGAGCCTGCATTAATAATCAACAGATTCGCCACCATAACAAATGCGTGATTCTGGAACTGCTGTACCGGCAAAAGCGCGCCAATAAATCAACGCTGGCCCGGCTGGCGCAAATTTCGATTCCGGCAGTCAGTAATATTTTGCAGGAACTGGAAAGCGAAAAACGGGTGGTGAATATTGACGATGAAAGCCAGACGCGCGGGCATAGTAGCGGTACATGGCTGATTGCGCCGGAA  >  CP009273/2675969‑2676458

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.