| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3536271 = | 38 (0.990) | 4 (0.110) | 4/298 | NT | 10.4% | coding (185/237 nt) | feoC | putative DNA‑binding transcriptional regulator |
| ? | CP009273 | 3536682 = | 33 (0.900) | coding (157/879 nt) | yhgA | transposase_31 family protein | |||||
ATATCGAACTGCTGGCAACCCGCAAGTCGGTAAGCAGTTGCTGCGCAGCCAGCA‑CCACCGGTGATTGCCATTAATGGCTTCACTTATTCAGGTGCGCGATTTGCTGGCGTTACGGGGCCGTATGGAAGCGGCCCAGATAAGCCAGACATTGAACACTCCACAGCCAATGATTAACGCCATGCTGCAACAACTGGAAAGTATGGGCAAAGCCGTGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTCGCTAATACACAGGTGTGGAGTGGCGCGTAGAGTCGC > CP009273/3536014‑3536496 | atatCGAACGGCGGGCAACCCGCAAGTCGGGAAGCAGTTGCTGCGCAGCCAGCA‑CCACCGGTGATTGCCATTAATGGCTTCACTTATTCANGTGCGCGATTTGCTGGCGTTACGGGGCCGTATGGAAGCGGCCCAGATAAGCCAGACATTGAACACTCCACAGCCAATGATTAACGCCATGCTGCAACAACTGGAAAGTATGGGCAAAGCCGTGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCggaagga < 1:563655/274‑1 (MQ=255) aaCCCGCAAGTCGGTAAGCAGTTGCTGCGCAGCCAGCACCCACCGGTGATTGCCATTAATGGCTTCACTTATTCAGGTGCGCGATTTGCTGGCGTGACGGGGCCGTATGGAAGCGGCCCAGATAAGCCAGACATTGAACACTCCACAGCCAATGATTAACGCCATGCTGCAACAACTGGGAAGTATGGGCAAAGCCGTGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTgcgc > 1:423955/1‑274 (MQ=255) ttggTAAGCAGTTGCTGCGCAGCCAGCA‑CCACCGGTGATGGCCATTAATGGCTTCACTTATTCAGGTGCGCGATTTGCTGGCGTTACGGGGCCGTATGGAAGCGGCCCAGATAAGCCAGACATTAGACACTCCACAGCCAATGATTAACGCCATGCTGCAACAACTGGAAAGTATGGGCAAAGCCGTGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGgcg < 1:578223/273‑1 (MQ=255) aggaGTTGCTGCGCAGCTAGCG‑CCACAGGTTATTGCCATTTATGGCTTTACTTATTCAGGTGCGCGATTTGCTGGCGTTACGGGGCCGTATGGATGCGGCCCAGATAAGCCAGACATTGAACACTCCACAGCCAATGATTAACGCCATTCTGCAACAACTGGAAAGTATTGGCAAAGCCGTGCTGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGt < 1:377572/272‑1 (MQ=255) gccagcA‑CCACCGGTGATTGCCATTAATGGCTTCACTTATTCAGGTGCGCGATTTGCTGGCGTTACGGGGCCGTATGGAAGCGGCCCAGATAAGCCAGACATTGAACACTCCACAGCCAATGATTAACGCCATGCTGCAACAACTGTGAAGTATGGGCNAAGCCGTGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATc > 1:655591/1‑275 (MQ=255) gccagcA‑CCACCGGTGATTGCCATTAATGGCTTCACTTATTCAGGTGCGCGATTTGCTGGCGTTACGGGGCCGTATGGAAGCGGCCCAGATAAGCCAGACATTGAACACTCCACAGCCAATGATTAACGCCATGCTGCAACAACTGGAAAGTATGGGCAAAGCCGTGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGa > 1:225104/1‑244 (MQ=255) gccagcA‑CCACCGGTGATTGCCATTAATGGCTTCACTTATTCAGGTGCGCGATTTGCTGGCGTTACGGGGCCGTATGGAAGCGGCCCAGATAAGCCAGACATTGAACACTCCACAGCCAATGATTAACGCCATGCTGCAACAACTGGAAAGTATGGGCAAAGCCGTGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGa < 2:225099/244‑1 (MQ=255) cGGTGATTGCCATTAATGGCTTCACTTATTCAGGTGCGCGATTTGCTGGCGTTACGGGGCCGTATGGAAGCGGCCCAGATAAGCCAGACATTGAACACTCCACAGCCAATGATTAACGCCATGCTGCAACAACTGGAAAGTATGGGCAAAGCCGTGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCGGCGTGAACCTTCCTCCCTCGCCTGTTTTgg > 2:289372/1‑275 (MQ=255) attttgcattgcggcaatagcgtaacgcatcatgcgaaatgcgatcagtttgtttgaggtgctttgatgttcaatcagacaatagatgtatcctggtccttgttccgttttcaccgaccacagcacatcggaatagctttcacgcagatcgtcatcaatAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCa < 1:497650‑M1/63‑1 (MQ=255) tgcattgcggcaatagcgtaacgcatcatgcgaaatgcgatcagtttgtttgaggtgctttgatgttcaatcagacaatagatgtatcctggtccttgttccgttttcaccgaccacagcacatcggaatagctttcacgcagatcgtcatcaatAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGc > 2:497643‑M1/156‑222 (MQ=255) tATGGAAGCGGCCCAGATAAGCAAGACATTGAACACTTCACAGCCAATGATTAACGCCATGCTGCAACAACAGGAAAGTATGGGCAAAGCCGTGCGGATTCAGGAAGAACCTGACGGCTGCCTCGCTGGCAGTTGTAAAAGCTGCCCGGAAGGACAAGCCTGTCGGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGaa > 1:91443/1‑215 (MQ=255) acgcatcatgcgaaatgcgatcagtttgtttgaggtgctttgatgttcaatcagacaatagatgtatcctggtccttgttccgttttcaccgaccacagcacatcggaatagctttcacgcagatcgtcatcaata < 2:341449‑M1/1‑1 (MQ=255) atcatgcgaaatgcgatcagtttgtttgaggtgctttgatgttcaatcagacaatagatgtatcctggtccttgttccgttttcaccgaccacagcacatcggaatagctttcacgcagatcgtcatcaatAAAGc > 1:341455‑M1/132‑136 (MQ=255) gCCAAGATAAGCCAGCCACTGAACACTCCACAGCCAATGATTAACGCCCTGCTGCAACAACTGGAAAGTATGGGCAAAGCCGTGCGGATTCAGGAAGAACCGGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTgcagca < 2:249542/274‑1 (MQ=255) ttgtttgaggtgctttgatattcaatcagacaatagatgtatcctggtccttgttccgttttcaccgaccacagcacatcggaatagctttcacgcagatcgtcatcaatAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGa < 1:591356‑M1/165‑1 (MQ=255) tCCACAGCCAATGATTAACGCCATGCTGCAACAACTGGAAAGTATGGGCAAAGCCGTGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGCAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTcc > 2:634086/1‑225 (MQ=255) caGCCAATGATTAACGCCATGCTGCAACAACTGGAAAGTATGGGCAAAGCCGTGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGCAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATaa < 1:634095/225‑1 (MQ=255) ttaaaataaaaaaagaaaatagatgtatcctggtccttgttccgttttcaccgaccacagcacatcggaatagctttcacgcagatcgtcatcaatAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAgg > 2:591347‑M1/97‑275 (MQ=255) aTGATTAACGCCATGCTGCAACAACTGGAAAGTATGGGCAAAGCCGTGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTg > 2:221327/1‑116 (MQ=255) aTGATTAACGCCATGCTGCAACAACTGGAAAGTATGGGCAAAGCCGTGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTATTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGa > 2:156684/1‑275 (MQ=255) ttAACGCCATGCTGCAACAACTGGAAAGTATGGGCAAAGCCGTGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTg < 1:221332/116‑1 (MQ=255) tAACGCCATGCTGCAACAACTGGAAAGTATGGGCAAAGCCGTGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTATTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACt < 1:156687/275‑1 (MQ=255) cATGCTGCAACAACTGGAAAGTATGGGCAAAGCCGTGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTNGGCGCTGCGTTACCCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTCGc < 1:615532/272‑1 (MQ=255) tgctgcAACAACTGGAAAGTATGGGCAAAGCCGTGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTACGTTCCTTTGAAAGCCTCTCGCAGGGATTAAAActctctctta > 2:615523/1‑271 (MQ=255) ctgcAACAACTGGAAAGTATGGGCAAAGCCGTGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTCGCTAATaca < 1:289378/275‑1 (MQ=255) aataaaatggtgaGTATGGGTAGTGGCGGGCGGATTCAGGAAGNACCTGACGGCTGGCTCTCTGGCAGTTGTAAACGCTGCCCGGAAGGAAAATCCTGTCTGCGCGAGTTGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCACCCGGGCTTTTTTGCGTGCGGATTTCCATAAAAATGCAACTCTTGGAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTCGCTAATaca < 2:457501/260‑1 (MQ=255) gAAAGTATGGGCAAAGCCGTGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTCGCTAATACACAGGTGTGGAGt < 1:571101/275‑1 (MQ=255) gCCGTGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTcc > 2:526332/1‑173 (MQ=255) gCCGTGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAACATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTTAAAGCATCTCGCAGGGATGAACACTCGCTAATACACAGGGTTGGAGTGGAGCNTGGAGtttc > 2:260872/1‑272 (MQ=255) gCCGTGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAAct > 1:318103/1‑187 (MQ=255) tGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCt > 2:646620/1‑91 (MQ=255) tGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATaa < 1:526340/173‑1 (MQ=255) tGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTg < 2:318097/187‑1 (MQ=255) gATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGt < 1:646629/91‑1 (MQ=255) tCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAgtggtg > 2:357558/1‑78 (MQ=255) tCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGAGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGt > 2:140073/1‑191 (MQ=255) gaagaaCCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGgcg < 1:357564/78‑1 (MQ=255) gaagaaCCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGAGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGt < 1:140074/191‑1 (MQ=255) tGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTaa > 2:36224/1‑79 (MQ=255) ggCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCtt < 1:36224/79‑1 (MQ=255) tGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCg > 2:506723/1‑103 (MQ=255) gCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTggg > 2:269771/1‑60 (MQ=255) tctctGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTAATCCAGCGGCTGTTCTGGAAAGCCCGGTAt < 1:506730/103‑1 (MQ=255) ctctGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCt < 1:269776/60‑1 (MQ=255) ttGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCa > 2:691086/1‑68 (MQ=255) gTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCGACACGGCGTAANTTCCTTTGAAAGCATCTCGCAGGGATGaa > 1:655780/1‑188 (MQ=255) aaaaGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGc < 1:691095/68‑1 (MQ=255) | ATATCGAACTGCTGGCAACCCGCAAGTCGGTAAGCAGTTGCTGCGCAGCCAGCA‑CCACCGGTGATTGCCATTAATGGCTTCACTTATTCAGGTGCGCGATTTGCTGGCGTTACGGGGCCGTATGGAAGCGGCCCAGATAAGCCAGACATTGAACACTCCACAGCCAATGATTAACGCCATGCTGCAACAACTGGAAAGTATGGGCAAAGCCGTGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTCGCTAATACACAGGTGTGGAGTGGCGCGTAGAGTCGC > CP009273/3536014‑3536496 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |