New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 3641005	62 (1.610)	6 (0.160)	6/302	NT	8.5%	coding (1347/1353 nt)	gor	glutathione oxidoreductase
	?	CP009273	= 3641218	69 (1.870)					intergenic (‑70/‑205)	dinQ/agrA	UV‑inducible membrane toxin, DinQ‑AgrB type I toxin‑antitoxin system/Inactive antisense sRNA

GAGCAGTATGGCGACGATCAGGTGAAAGTGTATAAATCCTCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCT‑GGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGTTAAAGGGCTAAGAGTAGTGTGCTCTTAGCCCTTAATTACGTTTCCGCTATCAGTTCAGAAGCTGAAGCAGAAAGCGGATCAGTTCCAGCAGCGCAATTAACGCCCCTAGAACGATGATTGCTTTATCAATCACCCGTTTTCTCCATGCGATGGAGTGAGAATGCATCCGCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCG  >  CP009273/3640739‑3641276                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                                gAGTAGTATGGCGACGATCAGTTGAAAGTGTATAAATCCTCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCT‑GGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTAATCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTaaa                                                                                                                                                                                                                                                                          <  1:718860/274‑1 (MQ=255)       tATGGCGACGATCAGGTGAAAGTGTATAAATCCTCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCT‑GGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGTTaaa                                                                                                                                                                                                                                                                   <  1:207618/275‑1 (MQ=255)             gacgaTCAGGGGAAAGTGTATAAATCCGCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCT‑GGTGTGCGTTGGATCGGAAGAGAAGAGTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGTTAAAGGGCt                                                                                                                                                                                                                                                              <  1:355033/274‑1 (MQ=255)                 ataacgTGAAAGGGTTTAAATCCTCTTTCACCGCGATGTTGACCGCCCTCACCACTCCCCGCCAGCCGTGCCGCATGAAGCG‑GGTGTGCGGTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGTTAAAGGGCTAaga                                                                                                                                                                                                                                                          <  2:663816/269‑1 (MQ=255)                 aTCAGGTGAAAGTGTATAAATCCTCTTTCTCCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCT‑GGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGNAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGTTAAAGGACTAaga                                                                                                                                                                                                                                                          >  1:498463/1‑274 (MQ=255)                 aTCAGGTGAAAGTGTATAAATCCTCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCT‑GGTGTGCGTTGGATCGGACGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGTTAAAAGGCTaaaa                                                                                                                                                                                                                                                          >  1:128800/1‑272 (MQ=255)                      ttcaaaggggtaaaaGCCTCGTTCACCGTGAGGTATGCCGCCGTCACCACTTACCGCCAGCGGGGCCGCATGAAGCT‑GGTGGGCGTTGGATCGGAAGAGAAGATTGGCGGTATTGACGGGATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGTTAAAGGGCTAAGagtagt                                                                                                                                                                                                                                                     <  2:192006/262‑1 (MQ=255)                        taaaGTGTGTAAATCCTATTTCACCGGGAGGGGTGCCGCCGGCCACACTCTCCGGCATCCGTGTGGTATAAAGTTGGGTGTG‑GTTGGATTGGAATAGAAGAGTGTCGGTATTCACGGTATTGTGTTTGGTATGTACGAAATGTTGCAAGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGTCAGAAGAGTTCGTGACAATGCGTTAAATGTTAAAGGGCTAAGATTAgtgt                                                                                                                                                                                                                                                   <  2:692958/273‑1 (MQ=255)                           aGTGTATAAATCCTCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCT‑GGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGTTAAAGGGCTAAGAGTAGTGTGct                                                                                                                                                                                                                                                >  1:298242/1‑274 (MQ=255)                                     tCCTCTTTCACCGCGATGTTTCCCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCT‑GGTGTGCGTTGGATCGGAAGAGACGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGTTAAAGGGCTAAGAGTAGTGTGCTCTTAGCCCtt                                                                                                                                                                                                                                      <  1:368470/274‑1 (MQ=255)                                       ctctTTCACCGCGATGTATACCGATGTCGTCACTCACCGCCAGCCGTGCCGCATGAAGCT‑GGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAANACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTAGTGACAATGAGTAAAATGTTAAAGGGCTAAAAGAAGTGTGCTCATAGACCTTaa                                                                                                                                                                                                                                    >  1:496610/1‑274 (MQ=255)                                                        ataCCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCT‑GGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGCAGAGTTCGTGACA‑‑tgcgccgtgacaggcagtggatgagtaagcggatgcattctcactccatcgcatggcgaaaacgg                                                                                                                                                                                                                 >  1:699537‑M1/1‑210 (MQ=255)                                                         taCCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCT‑GGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCCACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATTCGTTCAATGTTAAAATTATAATAGTAGTGGTCTCTTAGCCCTTTAtcttatttttttta                                                                                                                                                                                                                      >  2:370703/1‑257 (MQ=255)                                                             gccgTCACCACTCACCGCCAGCCGTGCCGCATGAAGCT‑GGTGTGCGTTGGATCGGAAGAGAAGAATGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGTTAAAGGGCTAAGAGTAGTGTGctct                                                                                                                                                                                                                                              <  1:370709/242‑1 (MQ=255)                                                               cgTCACCACTCACCGCCAGCCGTGCCGCATGAAGCT‑GGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGTTAAAGGGCTAAGAGTAGTTTGCTCTTAGCCCTTAATTACGTTTCCGCTATCAGTTCAGa                                                                                                                                                                                                            >  1:262452/1‑274 (MQ=255)                                                                          aCCGCCAGCCGTGCCGCATGAAGCT‑GGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGAAAATGCGTTAAATGt                                                                                                                                                                                                                                                                       >  2:501617/1‑204 (MQ=255)                                                                              ccAGCCGTGCCGCATGAAGCN‑GGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGACTAGTCAGTGACAATGCGTTAAATGTTaaa                                                                                                                                                                                                                                                                   <  1:501624/204‑1 (MQ=255)                                                                                    gTGCCGCATGAAGCT‑GGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGt                                                                                                                                                                                                                                                                       >  1:73144/1‑194 (MQ=255)                                                                                     tGCCGCATGAAGCT‑GGTTGGCGTTGGAGCGGAAGAGAAGATTGTCGGTATTCACGGCGTTGGCTTGGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTGGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGTTAAAGGGCTAAGAGTAGTGTGctct                                                                                                                                                                                                                                              <  1:33257/218‑1 (MQ=255)                                                                                        cGCATGAAGCT‑GGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGTTaaa                                                                                                                                                                                                                                                                   <  2:73143/194‑1 (MQ=255)                                                                                                acagggTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGNGCTGAAGATGGGGGCAACCCAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGTTAAAGGGCTAAGAGTAGTGTGCTCTTAGCCCTTAATTACGTTTCCGCTATCAGTTCAGAAGCTGAAGCAGAAAGCGGATCAGTTCcagcag                                                                                                                                                                            <  1:540027/270‑1 (MQ=255)                                                                                                      tgtgCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATG                                                                                                                                                                                                                                                                                 >  1:198141‑M1/1‑167 (MQ=255)                                                                                                          cGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGtt                                                                                                                                                                                                                                                                             <  2:198138/167‑1 (MQ=255)                                                                                                          cGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAAt                                                                                                                                                                                                                                                                         >  1:118082/1‑171 (MQ=255)                                                                                                              ggATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGTTa                                                                                                                                                                                                                                                                     <  2:118081/171‑1 (MQ=255)                                                                                                                                    gTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGCTAAATGTTAAAGGGCTAAGAGTAGtgtg                                                                                                                                                                                                                                                  >  1:603984/1‑168 (MQ=255)                                                                                                                                      actCACGGCNTTGGCTTTGGTATGGACGAAATGTGGCAGGGCTTCGCGGTCGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCGAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGTTAAAGGGCTAAGAGTAGTGGGCTCTTAGCCCTTAATTACGTTTCCGCTATCAGTTCAGAAGCTGAAGCAGAAAGCGGATCAGTTCCAGCAGCGCAATTAACGCCCCTAGAACGATGATTGCTTTatcaat                                                                                                                                     <  2:262447/273‑1 (MQ=255)                                                                                                                                        tCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGTTAAAGGGCTAAGAGTAGTGTGctct                                                                                                                                                                                                                                              <  2:603975/168‑1 (MQ=255)                                                                                                                                                 tGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGagacatgcgccgtgacaggcagtggatgagtaagcggatgcattctcactccatcgcatggagaaaacgggtgattgataaagcaatcatcgttctaggggcgttaattgcgctgctggaactgatccgctttctgcttcagcttctgaac                                                                                                                          >  1:298426‑M1/1‑124 (MQ=255)                                                                                                                                                        ggTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATG                                                                                                                                                                                                                                                                                 >  1:236042‑M1/1‑117 (MQ=255)                                                                                                                                                             ggACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATg                                                                                                                                                                                                                                                                        >  1:3837/1‑121 (MQ=255)                                                                                                                                                             ggACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGt                                                                                                                                                                                                                                                                       >  1:272035/1‑122 (MQ=255)                                                                                                                                                             ggACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGTTAAAGGGCTAAGAGTAGTGTGCTCTTAGCCCTTAATTACGTTTCCGCTATCAGTTCAGAAGCTGAAGCAGAAAGCGGATCAGTTCCAGCAGCGCAATTAACGCCCCTAGAACGATGATTGCTTTATCAACCACCCGTTTTCTCAATGcagtg                                                                                                               >  2:653113/1‑270 (MQ=255)                                                                                                                                                             ggACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTGCGTGACAATGCGTTAAATGt                                                                                                                                                                                                                                                                       >  2:357750/1‑122 (MQ=255)                                                                                                                                                             ggACGAAAGGTGGCAGGGCTTCGCGGTGGCGCTGAAGATTGCGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGagacatgcgccgtgacaggcagtggatgagtaagcggatgcattctcactccatcgcatggagaaaacgggtgattgataaagcaatcatcgttctaggggcgttaattgcgctgctggaactgatccgctttctgcttcagcttctgaactgatagcggaa                                                                                                               <  2:298420‑M1/274‑163 (MQ=255)                                                                                                                                                                 gAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGTTaaa                                                                                                                                                                                                                                                                   <  2:272030/122‑1 (MQ=255)                                                                                                                                                                 gAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGTTaaa                                                                                                                                                                                                                                                                   <  1:357756/122‑1 (MQ=255)                                                                                                                                                                 gAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGTTaa                                                                                                                                                                                                                                                                    <  2:3837/121‑1 (MQ=255)                                                                                                                                                                   aaTGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGTTAAAGGGCTAAGAGTAGTGTGCTCTTAGCCCTTAATAACGTTTCCGCTATCAGTTCAGAAGCTGAAGCAGAAAGCGGATGAGTTCCAGCAGCGCAATTAACGCCCCTAGAACGATGATTGCTTTATCAATCACCCGTTTTCTCCATGCGATGGAGTga                                                                                                         >  1:679797/1‑274 (MQ=255)                                                                                                                                                                        tGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAAAGGCGGCAGAAGAGTTCGTGACAATGCGTTACATGTTAAAGGGCTAAGAGTAGTGTGCTCTTAGCCCTTAATTACGTTTCCGCTATCAGTTCAGATGCTGAAGCAGAAAg                                                                                                                                                                                             >  1:454110/1‑185 (MQ=255)                                                                                                                                                                          aaGGGCTGCGAGGGGGCGCGGAGGATGGGGGCAACCAAAAAAGACTTCGACAAGACCGTCGCCATTCACGCAACGGCGGCAGAAGAGTTCGGGACAATGCGTTAAATGTTAAAGGGCTAAGAGTAGTGTGCTCTTAGCCCTTAATTACGTTTCCGCTATCAGTTCAGAAGCTGAAGCAGAAAGCGGATCAGTTCCAGCAGCGCAATTAACGCCCCTAGAACGATGATTGCTTTATCAATCACCCGTTTTCTCCATGCGATGGAGTGAGAATGCa                                                                                                  <  2:679788/273‑1 (MQ=255)                                                                                                                                                                            gggCTTCTCGGTGGCGCTGAAGATGGGGTCAACCAAAAAAGACTTCGTCAATACCCTCGCCATTCCCCCAACGGCGGCAGCAGAGTTCGTGACACTGCGTTAAATGTTACAGGGCTAAGAGTAGTGTGCTCTTAGCCCTTAATTACGTTTCCGCTATCAGTTCAGAAGCTGAAGCAGAAAGCGGa                                                                                                                                                                                         <  2:454103/185‑1 (MQ=255)                                                                                                                                                                               cTTGGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGTTAAAGGGCTAAGNGTAGTGTGCTTATAGCCCTTAATTACGTTTCCGCTATCAGTTCAGAAGCTGAAGCAGAAAGCGGATCAGTTCCAGCAGCGCAATTAACGCCCCTAGAACGATGATTGCTTTATCAATCACCCGTTTTCTCCATGCGATGGAGTGAGAATGCATCCGCt                                                                                            <  1:653122/275‑1 (MQ=255)                                                                                                                                                                               cTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGTTAAAGGGCt                                                                                                                                                                                                                                                              >  2:318125/1‑113 (MQ=255)                                                                                                                                                                                  cgcgGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATg                                                                                                                                                                                                                                                                        >  1:267733/1‑100 (MQ=255)                                                                                                                                                                                  cgcgGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGTTAAAGGGCTAAGAGTAGTGTGCTCTTAACCCTTAATTACGTTTCCGCTATCAGTTCAGac                                                                                                                                                                                                           >  2:15432/1‑160 (MQ=255)                                                                                                                                                                                   gcgGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGTTAAAGGGCTAaga                                                                                                                                                                                                                                                          <  1:318131/113‑1 (MQ=255)                                                                                                                                                                                     ggTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGTTAAAGGGCTAAGAGTAGTGTGCTCTTAGCCCTTAATTACGTTTCCGCTATCAGTTCAGAAGCTGAAGCAGAAAGCGGATCAGTTCCAGCAGCGCAATTAACGCCCCTAGAACGATGATTGCTTTatcaat                                                                                                                                     <  1:8747/228‑1 (MQ=255)                                                                                                                                                                                      gTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGTTaa                                                                                                                                                                                                                                                                    <  2:267728/100‑1 (MQ=255)                                                                                                                                                                                      gTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGTTAAAGGGCTAAGAGTAGTGTGCTCTTAACCCTTAATTACGTTTCCGCTATCAGTTCAGAAGCTg                                                                                                                                                                                                       <  1:15432/161‑1 (MQ=255)                                                                                                                                                                                       tGGCGCTGAAGATGGGAGCAACCAAAAAAGGCTTCGGCACTTCCGTCGCCATTCACCCAACTGCGGCAGAAGAGTTCGTGACA‑‑tgcgccgggacaggcagtggatgagtaagcggatgcattctcactccatcgcatggagaaaacgggtgattgataaagcaatcatcgttctaggggcgttaattgcgctgctagaactgatccgctttctgcttcagcttctgaactgatagcggaaacgtaattaagggctaagagcacactactctta                                                                                    <  2:699528‑M1/274‑191 (MQ=255)                                                                                                                                                                                        ggCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGagacatgcgccgtgacaggcagtggatgagtaagcggatgcattctcactccatcgcatggagaaaacgggtgattgataaagcaatcatcgttctaggggcgttaattgcgctgctggaactgatccgctttctgcttcagcttctgaactgatagcg                                                                                                                  >  1:713836‑M1/1‑85 (MQ=255)                                                                                                                                                                                         gcgcTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGTTa                                                                                                                                                                                                                                                                     >  2:598495/1‑96 (MQ=255)                                                                                                                                                                                            cTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAANGCGTTAAANGTTAAAGGGCTAAGAGTAGTGTGCTCTTAGCCCTTAATTACGTTTCCGCTATCAGTTCAGAAGCTGAAGCAGAAAGCGGATCAGTTCCAGCAGCGCAATTAACGCCCCTAGAACGATGATTGCTTTATCAATCACCCGTTTTCTCCATGCGATGGACTGAGAATGCATCCGCTTACTCATCCa                                                                                  <  1:467721/272‑1 (MQ=255)                                                                                                                                                                                            cTGAAGAGGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGagacatgcgccgtgacaggcagtggatgagtaagcggatgcattctcactccatcgcatggagaaaacgggtgattgataaagcaatcatcgttctaggggcgttaattgcgctgctggaactgatccgctttctgcttcagcttctgaactgatagcggaaa                                                                                                              <  2:713826‑M1/244‑164 (MQ=255)                                                                                                                                                                                             tGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGTTAAAgg                                                                                                                                                                                                                                                                 <  1:598504/96‑1 (MQ=255)                                                                                                                                                                                                         cAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGTTAAAGGGCTAAGAGTAGTGTGCTCTTAGCCCTTAATTACGTTTCCGCTATCAGTTCAGa                                                                                                                                                                                                            >  1:520900/1‑137 (MQ=255)                                                                                                                                                                                                         cAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATG                                                                                                                                                                                                                                                                                 >  2:510713‑M1/1‑68 (MQ=255)                                                                                                                                                                                                           aCCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGc                                                                                                                                                                                                                                                                                >  1:650430/1‑67 (MQ=255)                                                                                                                                                                                                             cAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGtt                                                                                                                                                                                                                                                                             <  1:510720/68‑1 (MQ=255)                                                                                                                                                                                                             cAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGTTAAAGGGCTAAGAGTAGTGTGCTCTTAGCCCTTAATTACGTTTCCGCTATCAGTTCAGAAGCt                                                                                                                                                                                                        <  2:520893/137‑1 (MQ=255)                                                                                                                                                                                                               aaaaaGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTa                                                                                                                                                                                                                                                                            <  2:650421/67‑1 (MQ=255)                                                                                                                                                                                                                aaaaGACTTCGAAAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGAGTTAAATGTTAAAGGGCTAAGAGTAGTGTGCTCTTAGCCCTTAATTACGTTTCCGCTATCAGTTCAGAAGCTGAAGCAGAAAGCGGATCAGTTCCAGCAGCGAAATTAACGCCCCTAGAACGATGATTGCTTTATCAATCACACGTTTTATACATGCGATGGAGTGAGAATGAATCAGATTACTCATCCACTACCTGTAACGGCGCacgaccc                                                           >  1:724443/1‑269 (MQ=255)                                                                                                                                                                                                                         cGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGt                                                                                                                                                                                                                                                                       >  1:326920/1‑62 (MQ=255)                                                                                                                                                                                                                           aCAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGTTAAAGGGCTAAGAGTAGTGTGCTCTTAGCCCTTAATAACGTTTCCGCTCTCAGTTCAGAAGCTGAAGCAGAACGAGGATCAGTTCCAGCAGCGAAATTAACGCCCCTAGAAAGATGATTGCTTTATCAAACACACGTTTTCTCCATGCGATGAAGTGAGAATACAGCGGCATACTCATCCACTGCACGTAACGGCGGATGTCTCCTTGttcggt                                                 >  2:14836/1‑270 (MQ=255)                                                                                                                                                                                                                             aaTACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGTTaaa                                                                                                                                                                                                                                                                   <  2:326914/62‑1 (MQ=255)                                                                                                                                                                                                                                    tCGCCATTCACCCAACGGCGGCAGAAGAGTTCTTGACAATGCGTTAAATGTTAAAGGGCTAAGAGTAGTGTGCTCTTAGCCCTTAATTACGTTTCCGCTATCAGTTCAGAAGCTGAAGCAGAAAGCGGATCAGTTCCAGCAGCGCAATTAAc                                                                                                                                                                  >  1:706032/1‑152 (MQ=255)                                                                                                                                                                                                                                    tCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGTTAAAGGGCTAAGAGTAGTGTGCTCTTAGCCCTTAATTACGTTTCCGCTATCAGTTCAGAAGCTGAAGCAGAAAGCGGATCAGTTCCAGCAGCGCAGTTAACGCCCCTNGAACGATGATTGCTTTATCAATCACCCGTTTTCTCCATGCGATGGAGTGAGAATGCATCCGCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAActctc                                       >  1:654734/1‑275 (MQ=255)                                                                                                                                                                                                                                        cATTCACCCAACGGCGGCAGAAGAGTTCTTGACAATGCGTTAAATGTTAAAGGGCTAAGAGTAGTGTGCTCTTAGCCCTTAATTACGTTTCCGCTATCAGTTCAGAAGCTGAAGCAGAAAGCGGATCAGTTCCAGCAGCGCAATTAACGccc                                                                                                                                                              <  2:706022/152‑1 (MQ=255)                                                                                                                                                                                                                                               ccAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGTTAAAGGGCTAAGAGTAGTGTGCTCTTAGCCCTTAATTACGTTTCCGCTATCAGTTCAGAAGCTGAAGCAGAAAGCGGATCAGTTCCAGCAGCGCAATTAACGCCCCTAGAACGATGATTGc                                                                                                                                              >  1:44704/1‑161 (MQ=255)                                                                                                                                                                                                                                                   cggctgCAGAAGAGTTCGTGACAATTTGTTAAATGTTAAAGGGCTAAGAGTAGTGTGCTCATAGCCCTTAAATACGTTGCCGCTATCAGTTCAGAAGCTGAAGCAGAAAGCGGATCAGTTCCAGCAGCGCAACTAACGCCCCAAGAACGATGATTGCTTTa                                                                                                                                          <  2:44704/161‑1 (MQ=255)                                                                                                                                                                                                                                                         cAGAAGAGTTCGTGACAATGCGTTAAATGTTAAAGGGCTAAGAGTAGTGTGCTCTTAGCCCTTAATTACGTTTCCGCTATCAGTTCAGAAGCTGAAGCAGAAAGCGGATCAGTTCCAGCAGCGCAATTAACGCCCCTAGAACGATGATTGCTTTATCAATCACCCGTTTTCTCCATGCGATGGAGTGAGAATGCATc                                                                                                >  1:279489/1‑197 (MQ=255)                                                                                                                                                                                                                                                             agagTTCGTGACAATGCGTTAAATGTTAAAGGGCTAAGAGTAGTGTGCTCTTAGCCCTTAATTACGTTTCCGCTATCAGTTCAGAAGCTGAAGCAGAAAGCGGATCAGTTCCAGCAGCGCAATTAACGCCCCTAGAACGATGATTGCTTTATCAATCACCCGTTTTCTCCATGCGATGGAGTGAGAATGCATCCGCt                                                                                            <  2:279484/197‑1 (MQ=255)                                                                                                                                                                                                                                                                gtgcggttaattGCTTTAAATGTTAGAGGTATAGGGGTAAGGTCCTCGTAGCCCTTAATTACATTTCCGCTATCAGTACAGGAGCTGCAGCAGAAAGCGGTTCAGTTCCAGATGCGCAATTATCTCCCCTAGAACGATGATTGCTTTATCAATCACCCGTTTTCTCCATGCTATGGAGTGAGAATGCGTCCGCTTACTCATCCACTGCCTGTCACAGCGCATGTCTCATTGTTAGATAAAAACTCTCTCACTCCGGCCACAGCATCAGTTAACgg           <  2:654179/264‑1 (MQ=255)                                                                                                                                                                                                                                                                gTTCGTGACAATGCGTTAAATGTTAAAGGGCTAAGAGTAGTGTGCTCTTAGCCCTTAATTACGTTTCCGCTATCAGTTCAGAAGCTGAAGCAGAAAGCGGATCAGTTCCAGCAGCGCAATTAACGCCCCTAGAACGATGATTGCTTTATCAATCACCCGTTTTCTCCATGCGATGGAGTGAGAATGCATCCGCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGtt                                                     >  2:116264/1‑233 (MQ=255)                                                                                                                                                                                                                                                                 tatctgacaATGagacatgcgccgtgacaggcagtggatgagtaagcggatgcattctcactccatcgcatggagaaaacgggtgattgataaagcaatcatcgttctaggggcgttaattgcgctgctggaactgatccgctttctgcttcagcttctgaactgatagcggaaacgtaatta                                                                                                      <  1:401746‑M1/179‑172 (MQ=255)                                                                                                                                                                                                                                                                    gTGACAATGCGTTAAATGTTAAAGGGCTAAGAGTAGTGTGCTCTTAGCCCTTAATTACGTTTCCGCTATCAGTTCAGAAGCTGAAGCAGAAAGCGGATCAGTTCCAGCAGCGCAATTAACGCCCCTAGAACGATGATTGCTTTATCAATCACCCGTTTTCTCCATGCGATGGAGTGAGAATGCATCCGCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGAt                                                 <  1:116265/233‑1 (MQ=255)                                                                                                                                                                                                                                                                           tGCGTTAAATGTTAAAGGTCTAAGAGTAGTGTGCTCTTAGCCCTTAATTACGTTTCCGCTATCAGTTCAGAAGCTGAAGCAGAAAGCGGATCAGTTCCAGCAGCGCAATTAACGCCCCTAGAACGATGATTGCTTTATCAATCACCCGTTTTCTCCATGCGATGGAGTGAGAATGCATCCGCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCg  <  1:14836/273‑1 (MQ=255)                                                                                                                                                                                                                                                                           tGCGTTAAATGTTAAAGGGCTAAGAGTATTGTGCTCTTAGCCCTGAATTACGTTTCCGCTATCAGTTCAGAAGCTGAAGCAGAAAGCGGATCAGtt                                                                                                                                                                                   >  1:521854/1‑96 (MQ=255)                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                                GAGCAGTATGGCGACGATCAGGTGAAAGTGTATAAATCCTCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCT‑GGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAAATGTTAAAGGGCTAAGAGTAGTGTGCTCTTAGCCCTTAATTACGTTTCCGCTATCAGTTCAGAAGCTGAAGCAGAAAGCGGATCAGTTCCAGCAGCGCAATTAACGCCCCTAGAACGATGATTGCTTTATCAATCACCCGTTTTCTCCATGCGATGGAGTGAGAATGCATCCGCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCG  >  CP009273/3640739‑3641276

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.