New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 3840748	39 (1.010)	15 (0.410)	8/300	NT	30.8%	coding (1237/1320 nt)	uhpC	membrane protein regulates uhpT expression
	?	CP009273	= 3840859	30 (0.820)					coding (1126/1320 nt)	uhpC	membrane protein regulates uhpT expression

CGGAAGGTCCAGGGTCGGCTTGCGAACCTGGTTTAAGAAAGCCAGCATGGGTTACTCCTGAAATGAATACCTGCGTGAGGCATGCATTGTAAAAATCAGCAGCAAATCAGGCCTGAGATAGCGTCCAGGCAAAACCTGGAAAATTTCTTAGTTTTGCCGGATATGAAGTGAAAAGGTGAGATGCATCACGCTTCGCGCGGTGTCTGGGCGTTCAAAAAGGGCAGTAACAGCAGTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAAAATCCGCTCCAGTGCCAGGTATCGAGTACTTTCGCCAGCGGCCAACCAGCAAGCGACGCCCCCAGATAAGCAAACAAGCCGACAAACCCCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATGGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCGGCGAAA  >  CP009273/3840480‑3841013                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                          acgAAGGACCAAGGTCGGCTGGTGAACCTGGTTTAAGAATGCCGGCATGGTGTACGCATGAAATGAAGCTCTGCAGGGGGCATGCATTGTAAAAAGCAGCAGCAAATCAGGCCTGAGATAGCGTCCAGGCAAAACCTGGAAAATTACTTAGTTTTGCCGGATATGAAGTGAAAAGGTGAGATGCATCGCGTTTCGCGGGGTGTCTTGGCGTTCAAAAAGGGCAGTAACAGCAGTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAAAATc                                                                                                                                                                                                                                                                      <  2:692132/272‑1 (MQ=255)                 ggCTTGCGAACCTGGTTTAAGAAAGCCAGCATGGGTTACTCCTGAAATGAATACCTGCGTGAGGCATGCATTGTAAAAATCAGCAGCAAATCAGGCCTGAGATAGCGTCCAGGCAAAACCTGGAAAATTTCTTAGTTTTGCCGGATATGAAGNGAAAAGGTGAGATGCATCACGCTTCGCGCGGTGTCTGGGCGTTCAAAAAGGGCAGTAACAGCAGTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAgaggcggcaggggcggc                                                                                                                                                                                                                                                          >  1:596659‑M1/1‑253 (MQ=255)                  tgttGCGAACATCGTTTAAGAAATCCAGCATAGGTTACTACTGAAATGAATACCTGCGTGAGGCATGCATTGTAAAAATCAGAAGCAAATCAGGCCTGAGATAGCGTCCAGGCAAAACCTGGAAAATTTCTTAGTTTTGCCGGATATGAAGTGAAAAGGTGAGATGCATCACGCTTCGCGCGGTGTCTGGGCGTTCAAAAAGGGCAGTAACAGCAGTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAAAATCCGCTCCAGTGCCAGGTa                                                                                                                                                                                                                                                     <  2:623599/272‑1 (MQ=255)                       cGAACCTGGTTTAAGAAAGCCAGCATGGGTTACTCCTGAAATGAATACCTGCGTGAGGCATGCATTGTAAAAATCAGCAGCAAATCAGGCCTGAGATAGCGTCCAGGCAAAACCTGGAAAATTTCTTAGTTTTGCCGGATATGAAGTGAAAAGGTGAGATGCATCACGCTTCGCGCGGTGTCTGGGCGTTCAAAAAGGGCAGTAACAGCAGTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAgaggcggaaggggaggagacggggtttg                                                                                                                                                                                                                                               >  1:299280‑M1/1‑247 (MQ=255)                                         gCCAGCATGGGTTACTCCTGAAATGATTACCTGCATGAGGCATGCATTGTAAAAATCAGCAGCAAATCAGGCCTGAGATAGCGTCCAGGCAAAACCTGGAAAATTTCTTAGTTTTGCCGGATATGAAGTGAAAAGGTGAGATGCATCACGCTTCGCGCGGTGTCTGGGCGTTCAAAAAGGGCANTAACAGCANTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAAAATCCGCTCCAGTGCCAGGTATCGAGTACTTTCGCCAGCGGCCa                                                                                                                                                                                                                              >  1:468413/1‑274 (MQ=255)                                         gCCAGCATGGGTTACTCCTGAAATGAATACCTGCGTGAGGCATGCATTGTAAAAATCAGCAGCAAATCAGGCCTGAGATAGCGTCCAGGCAAAACCTGGAAAATTTCTTAGTTTTGCCGGATATGAAGTGAAAAGGTGAGATGCATCACGCTTCGCGCGGTGTCTGGGAGTTCAAAAAGGGCAGTAACAGCAGTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAgaggcggcaggggcggggacggggtttgtgggcttgtttgtttagc                                                                                                                                                                                                                             >  2:649725‑M1/1‑229 (MQ=255)                                                       cTCCTGAAATGAATACCTGCGTGAGGCATGCATTGTAAAAATCAGCAGCAAATCAGGCCTGAGATAGCGGCCAGGCAAAACCTGGAAAATTTCTTAGTTTTGCCGGATATGAAGTGAAAAGGTGAGATGCATCACGCTTCGCGCGGTGTCTGGGCGTTCAAAAAGGGCAGTAACAGCAGTGCGGAAATCCCGGCGGCGGCAGAGTGTTCCCACAAAgaggcggcaggggcggcgacggggtttgtcggcttgtttgcttatctgggggcgtcgct                                                                                                                                                                                                                <  1:249925‑M1/275‑60 (MQ=255)                                                                 gAATACCTGCGTGAGGCATGCATTGTAAAAATCAGCAGCAAATCAGGCCTGAGATAGCGTCCAGGCAAAACCTGGAAAATTTCTTAGTTTTGCCGGATATGAAGTGAAAAGGTGAGATGCATCACGCTTCGCGCGGTGTCTGGGCGTTCAAANAGGGCAGTAACAGCAGTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAAAATCCGCTCCAGTGCCAGGTATCGAGTACTTTCGCCAGCGGCCAACCAACAAGCGACGCCCCCAGATaa                                                                                                                                                                                                     >  1:601324/1‑275 (MQ=255)                                                                  aaTACCTGCGTGAGGCATGCATTGTAAAAATCAGCAGCAAATCAGGCCTGAGATAGCGTCCAGGCAAAACCTGGAAAATTTCTTAGTTTTGCCGGATATGAAGTGAAAAGGTGAGATGCATCACGCTTCGCGCGGTGTCTGGGCGTTCAAAAAGGGCAGTAACAGCAGTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAAAATCCGCTCCAGTGCCAGGTATAGAGTACTTACGCCAGCGGCCAACCAGCAAGCGACGCCCCAAGATaaa                                                                                                                                                                                                    >  1:197687/1‑274 (MQ=255)                                                                      ccTGGGTGAGGAAGGGATTGTAAAAATCAGAAGGAAATCAGGCAGGAGATGGCTTCCAGGCAAAACCTGGAAAATTTCTTAGTTTTGCCGGATATGAAGTGAAAAGGGGAGAGGCATCACGCTTCGCGCGGTGTCTAGGCGTTCAAAAAGGGCAGTAACAGCAGTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAAAATCCGCTCCAGTGCCAGGTATCGAGTACTTTCGCCAGCGGCCAACCAGCAAGCGACGccc                                                                                                                                                                                                             <  1:156298/262‑1 (MQ=255)                                                                                    gcatTGTAAAAATCAGCAGCAAATCAGGCCTGAGATAGCGTCCAGGCAAAACCTGGAAAATTTCTTAGTTTTGCCGGATATGAAGTGAAAAGGTGAGATGCATCACGCTTCGCGCGGTGTCTGGGCGTTCAAAAAGGGCAGTAACAGCAGTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAAAATCCGCTCCa                                                                                                                                                                                                                                                               >  2:615868/1‑198 (MQ=255)                                                                                        tGTAAAAATCAGCAGCAAATCAGGCCTGAGATAGCGTCCAGGCAAAACCTGGAAAATTTCTTAGTTTTGCCGGATATGAAGTGAAAAGGTGAGATGCATCACGCTTCGCGCGGTGTCTGGGCGTTCAAAAAGGGCAGTAACAGCAGTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAAAATCCGCTCCAGTGc                                                                                                                                                                                                                                                           <  1:615877/198‑1 (MQ=255)                                                                                           aaaaaTCAGCAGCAAATCAGGCCTGACATAGCGTCCACGCAAAACCTGGAAAATTTCTTGGTGTTGCCGGATATCAAGTGAAACGGTGAGATGCATCACGCTTCGCGCTGTGTCTGGGCGTTCAAAAAGGTCAGTAACAGCAGTGCGGACACCCCGGCGGCAATAGAA‑ATCACCACAAAAACTCCGCCCCAGTGCCAGGTATCAAGTACTGTCGCCAGCGGCCAACCAGCACGGGACGCCCCCATCTACACAAACAACCCGTCCAAcccccccc                                                                                                                                                                            >  2:343435/1‑270 (MQ=255)                                                                                               aaaagaagcaaataatGCGTGAGATAGCGTCCAGGCAAAACCTGGAAAATTTCTTATTTTGGCCGGATAGGAATTGAAAGTTTGGGATGCATCACGCTTCGCGCTGTGTCTGAGCGTTCAAAAAGGGCAGTAACAGCAGTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAgaggcggcaggggcggcgacggggtttgtcggcttgtttgcttatctgggggcgtcgcttgctggttggccgctggcgaaagtactcgatacctggcact                                                                                                                                                                       <  2:596650‑M1/269‑101 (MQ=255)                                                                                                tCAGCAGCAATTAGTGCCGGTGACATCGTCCAGGCAAAACCTGGATAATTTCTTAGTTTTGCGGGATATGAAGTGAAAAGGTGAGTTGCATCACGCTTCGCGCGGTGTCTGGGCGTTCAAAAAGGGCAGTAACAGCAGTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAgaggcggcaggggcggcgacggggtttgtcggcttgtttgcttatctgggggcgtcgcttgctggttggccgctggcgaaagtactcgatacctggcact                                                                                                                                                                       <  2:299274‑M1/274‑101 (MQ=255)                                                                                                tCAGCAGCAAATCAGGGCTGAAGTAGCGTCCAGGCAAAACCTGGAAAATTTCTTAGTTTTGCCGGATATGAAGTGAAAAGGTGAGATGCATCACGCTTCGCGCGGTGTCTGGGCGNTCAAAAAGGGTCGTGACAGCAGTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAgaggcggcaggggcggcgacggggtttgtcggcttgtttgcttatctgggggcgtcgcttgctggttggccgctggcgaaagtactcgatacctggcact                                                                                                                                                                       <  1:649734‑M1/274‑101 (MQ=255)                                                                                                                            tCCAGGCAAAACCTGGAAAATTTCTTAGTTTTGCCGGATATGAAGTGAAAAGGTGAGATGCATCACGCTTCGCGCGGTGTCTGGGCGTTCAAAAAGGGCAGTAACAGCAGTGCGGANATCCCGGCGGTGATAGAG‑ATAACCACAAAAAATCCGCTCCAGTGCCAGGTATCGAGTACTTTCGCCAGCGGCCAACCAGCAAGCGACGCCCCCAGATAAGCAAACAAGCCGACAAACCCCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTgc                                                                                                                                          <  1:649225/275‑1 (MQ=255)                                                                                                                                           gAAAATTTCTTAGTTTTGCCGGATATGAAGTGAAAAGGTGAGATGCATCACGCTTCGCGCGGTGTCTGGGCGTTCAAAAAGGGCAGTAACAGCAGTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAAAATCCGc                                                                                                                                                                                                                                                                   >  2:314838/1‑139 (MQ=255)                                                                                                                                               aTTTCTTAGTTTTGCCGGATATGAAGTGAAAAGGTGAGATGCATCACGCTTCGCGCGGTGTCTGGGCGTTCAAAAAGGGCAGTAACAGCAGTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAAAATCCGCTCCa                                                                                                                                                                                                                                                               <  1:314844/139‑1 (MQ=255)                                                                                                                                                                       aGTGAAAAGGTGAGATGCATCACGCTTCGCGCGGTGTCTGGGCGTTCAAAAAGGGCAGTAACAGCAGTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAAAATCCGCTCCAGTg                                                                                                                                                                                                                                                            >  2:139337/1‑118 (MQ=255)                                                                                                                                                                           aaaaGGTGAGATGCATCACGCTTCGCGCGGTGTCTGGGCGTTCAAAAAGGGCAGTAACAGCAGTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAAAATCCGCTCCAGTGCCAg                                                                                                                                                                                                                                                        <  1:139338/118‑1 (MQ=255)                                                                                                                                                                                   agaTGCATCACGCTTCGCGCGGTGTCTGGGCGTTCAAAAAGGGCAGTAACAGCAGTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAgaggcggcaggggcggcgacggggtttgtcggcttgtttgcttatctgggggcgtcgcttgctggttggccgctggcgaaagtactcgatacctgg                                                                                                                                                                           >  1:196063‑M1/1‑91 (MQ=255)                                                                                                                                                                                   agaTGCATCACGCTTCGCGCGGTGTCTGGGCGTTCAAAAAGGGCAGTAACAGCAGTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAAAATCCGCTCCAGTGCCAGGTATCGAGTACTTTCGCCAGCGGCCAACCAGCAAg                                                                                                                                                                                                                     >  2:399896/1‑145 (MQ=255)                                                                                                                                                                                   agaTGCATCACGCTTCGCGCGGTGTCTGGGCGTTCAAAAAGGGCAGTAACAGCAGTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAAAATCCGCTCCAGTGCCAGGTATCGAGTACTTTCGCCAGCGGCCAACCAGCAAGCGACGCCCCCAGATAAGCAAACAAGCCGACAAACCCCGTCGCCGACCCTGCCGCCTCTTTATGGGAACACGCTGCCGCCTCCACACCGGACAACATCTGTGGGCCCAACTCAAAAAAccccctggagcc                                                                                    >  2:135244/1‑265 (MQ=255)                                                                                                                                                                                       gCATCACGCTTCGCGCGGTGTCTGGGCGTTCAAAAAGGGCAGTAACAGCAGTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAgaggcggcaggggcggcgacggggtttgtcggcttgtttgcttatctgggggcgtcgcttgctggttggccgctggcgaaagtactcgatacctggcact                                                                                                                                                                       <  2:196060‑M1/187‑101 (MQ=255)                                                                                                                                                                                       gCATCACGCTTCGCGCGGTGTCTGGGCGTTCAAAAAGGGCAGTAACAGCAGTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAAAATCCGCTCCAGTGCCAGGTATCGAGTACTTTCGCCAGCGGCCAACCAGCAAGCGAc                                                                                                                                                                                                                 <  1:399903/145‑1 (MQ=255)                                                                                                                                                                                          tCACGCTTCGCGCGGTGTCTGGGCGTTCAAAAAGGGCAGTAACAGCAGTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAAAATCCGCTCCAg                                                                                                                                                                                                                                                              >  2:485627/1‑97 (MQ=255)                                                                                                                                                                                          tCACGCTTCGCGCGGTGTCTGGGCGTTCAAAAAGGGCAGTAACAGCAGTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAAAATCCGCTCCAGTGCCAGGTATCGAGTACTTTCGCCAGCGGCCAACCAGCAAGCGACGCCCCCAGATAAGCAAACAAGCCGACACACCCCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCCTACCGCTTCACATCTGTGGCCCAAAGACCAAAAAACCAATGGTGAAAAAGCAgg                                                                            >  1:167703/1‑275 (MQ=255)                                                                                                                                                                                              gCTTCGCGCGGTGTCTGGGCGTTCAAAAAGGGCAGTAACAGCAGTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAAAATCCGCTCCAGTGcc                                                                                                                                                                                                                                                          <  1:485634/97‑1 (MQ=255)                                                                                                                                                                                                          gtCTGGGCGTTCAAAAAGGGCAGTAACAGCAGTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAgaggcggcaggggcggcgacggggtttgtcggcttgtttgcttatctgggggcgtcgcttgctggttggccgctggcgaaagtactcgatacctgg                                                                                                                                                                           >  1:267284‑M1/1‑68 (MQ=255)                                                                                                                                                                                                              gggCGTTCAAAAAGGGCAGTAACAGCAGTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAgaggcggcaggggcggcgacggggtttgtcggcttgtttgcttatctgggggcgtcgcttgctggttggccgctggcgaaagtactcgatacctggcact                                                                                                                                                                       <  2:267279‑M1/164‑101 (MQ=255)                                                                                                                                                                                                                   ttCAAAAAGGGCAGTAACAGCAGTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAAAATCCGCTCCAGTGCCAGGTATCGAGTACTTTCGCCAGCGGCCAACCAGCAAg                                                                                                                                                                                                                     >  2:543022/1‑113 (MQ=255)                                                                                                                                                                                                                   ttCAAAAAGGGCAGTAACAGCAGTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAAAATCCGCTCCAGTGCCAGGTATCGAGTACTTTCGCCAGCGGCCAACCAGCAAGCGACGCCCCCAGATAAGCAAACAAGCCGACAAACCCCGTCGCCGCCCCTg                                                                                                                                                                   >  1:181967/1‑163 (MQ=255)                                                                                                                                                                                                                   ttCAAAAAGGGCAGTAACAGCAGTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAAAATCCGCTCCAGTGCCAGGTATCGAGTACTTTCGCCAGCGGCCAACCAGCAAGCGACGCCCCCAGATAAGCAAACAAGCCGACAAACCCCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTgccgccgc                                                                                                                                    >  2:165004/1‑194 (MQ=255)                                                                                                                                                                                                                       aaaaGGGCAGTAACAGCAGTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAAAATCCGCTCCAGTGCCAGGTATCGAGTACTTTCGCCAGCGGCCAACCAGCAAGCGAc                                                                                                                                                                                                                 <  1:543031/113‑1 (MQ=255)                                                                                                                                                                                                                       aaaaGGGCAGTAACAGCAGTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAAAATCCGCTCCAGTGCCAGGTATCGAGTACTTTCGCCAGCGGCCAACCAGCAAGCGACGCCCCCAGATAAGCAAACAAGCCGACAAACCCCGTCGCCGCCCCTgccgc                                                                                                                                                               <  2:181964/163‑1 (MQ=255)                                                                                                                                                                                                                       aaaaGGGCAGTAACAGCAGTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAAAATCCGCTCCAGTGCCAGGTATCGAGTACTTTCGCCAGCGGCCAACCAGCAAGCGACGCCCCCAGATAAGCAAACAAGCCGACAAACCCCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATa                                                                                                                                <  1:165007/194‑1 (MQ=255)                                                                                                                                                                                                                              cAGTAACAGCAGTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAAAATCCGCTCCAGTg                                                                                                                                                                                                                                                            >  1:214098/1‑63 (MQ=255)                                                                                                                                                                                                                               aGTAACAGCAGTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAAAATCCGCTCCAGTGCCAGGTATCGAGTACTTTCGCCAGCGGCCAACCAGCAAGCGACGCCCCCAGATAAGCAAACAAGCCGACAAACCCCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATGGTGAAGAAGCAgg                                                                            >  2:33002/1‑238 (MQ=255)                                                                                                                                                                                                                                  aaCAGCAGTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAAAATCCGCTCCAGTGCCAg                                                                                                                                                                                                                                                        <  2:214094/63‑1 (MQ=255)                                                                                                                                                                                                                                   aCAGCAGTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAAAATCCGCTCCAGTGCCAGGTATCGAGTACTTTCGCCAGCGGCCAACCAGCAAGCGACGCCCCCAGATAAGCAAACAAGCCGACAAACCCCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATGGTGAAGAAGCAGGTTGc                                                                        <  1:33002/238‑1 (MQ=255)                                                                                                                                                                                                                                      gcagTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAAAATCCGCTCCAGTGCCAGGTATCGAGTACTTTCGCCAGCGGCCAACCAGc                                                                                                                                                                                                                        >  2:463005/1‑91 (MQ=255)                                                                                                                                                                                                                                          tGCGGAAATCCCGGCGGCGATAGAT‑ATAACCACAAAgaggcggcaggggctgcgacggggtttgtcggcttgtttgcttatctgggggcgtcgcttgctggttggccgctggctaaagtactcgatacctggcact                                                                                                                                                                       <  1:645176‑M1/136‑101 (MQ=255)                                                                                                                                                                                                                                          tGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAgaggcggcaggggcggcgacggggtttgtcggcttgtttgcttatctgggggcgtcgcttgctggttggccgctggcgaaagtactcgatacctggcact                                                                                                                                                                       <  1:357574‑M1/136‑101 (MQ=255)                                                                                                                                                                                                                                          tGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAAAATCCGCTCCAGTGCCAGGTATCGAGTACTTTCGCCAGCGGCCAACCAGCaa                                                                                                                                                                                                                      >  2:585951/1‑89 (MQ=255)                                                                                                                                                                                                                                          tGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAAAATCCGCTCCAGTGCCAGGCATCGAGTACTTTCGCCAGCGGCCAACCAGCAAGc                                                                                                                                                                                                                    <  1:463012/91‑1 (MQ=255)                                                                                                                                                                                                                                           gCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAgaggcggcaggggcggcgacggggtttgtcggcttgtttgcttatctgggggcgtcgcttgctggttggccgctggcgaaagtactcgatacctgg                                                                                                                                                                           >  1:407306‑M1/1‑35 (MQ=255)                                                                                                                                                                                                                                           gCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAAAATCCGCTCCAGTGCCAGGTATCGAGTACTTTCGCCAGCGGCCAACCAGCAAGCGACGCCCCCAGATAAGCAAACAAGCCGACAAACCCCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTgccgccg                                                                                                                                     >  2:397423/1‑169 (MQ=255)                                                                                                                                                                                                                                              gAAATCCCGGCGGCGATAGAG‑ATAACCACAAAAAATCCGCTCCAGTGCCAGGTATCGAGTACTTTCGCCAGCGGCCAACCAGCAAGCGa                                                                                                                                                                                                                  <  1:585960/89‑1 (MQ=255)                                                                                                                                                                                                                                               aaaTCCCGTCGGCGATAGAG‑ATAACCACAAAgaggcggcaggggcggcgacggggtttgtcggcttgtttgcttatctgggggcgtcgcttgctggttggccgctggcgaaagtactcgatacctggcact                                                                                                                                                                       <  2:407299‑M1/131‑101 (MQ=255)                                                                                                                                                                                                                                               aaaTCCCGGCGGCGATAGAG‑ATAACCACAAAAAATCCGCTCCAGTGCCAGGTATCGAGTACTTTCGCCAGCGGCCAACCAGCAAGCGACGCCCCCAGATAAGCAAACAAGCCGACAAACCCCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCAt                                                                                                                                 <  1:397430/169‑1 (MQ=255)                                                                                                                                                                                                                                                aaTCCCGGCGGCGATAGAG‑ATAACCACAAAAAATCCGCTCCAGTGCCAGGTATCGAGTACTTTCGCCAGCGGCCAACCAGCAAGCGACGCCCCCAGATAAGCAAACAAGCCGACAAACCCCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAAt                                                                                          <  1:262609/207‑1 (MQ=255)                                                                                                                                                                                                                                                      ggcggcGATAGAG‑ATCACCACAAGGAATACGCTCCAGTGCCAGGTATCGAGTACTTTCGCCAGCGGCCAACCAGCAAGCGACGCCCCCAGATAAGCAAACAAGCCGACAAACCCCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACAct                                                                                                                                              >  1:507008/1‑149 (MQ=255)                                                                                                                                                                                                                                                                      aaCCACAAAAAATCCGCTCCAGTGCCAGGTCTCGAGTACTTTCGCCAGCGGCCAACCAGCAAGCGACGCCCCCAGATAAGCAAACAAGCCGACAAACCCCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATGGTGAAGCAGCAGGTTGCCTGCATCACGTAGCTGCCAAATGGCATCAGCCACAGGGCGCAGACTGAAAGCAAAATTACGGCGGCGaaa  >  1:441914/1‑274 (MQ=255)                                                                                                                                                                                                                                                                       aCCACAAAAAATCCGCTCCAGTGCCAGGTATCGAGTACTTTCGCCAGCGGCCAACCAGCAAg                                                                                                                                                                                                                     >  2:646376/1‑62 (MQ=255)                                                                                                                                                                                                                                                                         cacaAAgaggcggcaggggcggcgacggggtttgtcggcttgtttgcttatctgggggcgtcgcttgctggttggccgctggcgaaagtactcg                                                                                                                                                                                   <  1:33099‑M1/94‑89 (MQ=255)                                                                                                                                                                                                                                                                           caAAAAATCCGCTCCAGTGCCAGGTATCGAGTACTTTCGCCAGCGGCCAACCAGCAAGCGAc                                                                                                                                                                                                                 <  1:646385/62‑1 (MQ=255)                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                          CGGAAGGTCCAGGGTCGGCTTGCGAACCTGGTTTAAGAAAGCCAGCATGGGTTACTCCTGAAATGAATACCTGCGTGAGGCATGCATTGTAAAAATCAGCAGCAAATCAGGCCTGAGATAGCGTCCAGGCAAAACCTGGAAAATTTCTTAGTTTTGCCGGATATGAAGTGAAAAGGTGAGATGCATCACGCTTCGCGCGGTGTCTGGGCGTTCAAAAAGGGCAGTAACAGCAGTGCGGAAATCCCGGCGGCGATAGAG‑ATAACCACAAAAAATCCGCTCCAGTGCCAGGTATCGAGTACTTTCGCCAGCGGCCAACCAGCAAGCGACGCCCCCAGATAAGCAAACAAGCCGACAAACCCCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATGGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCGGCGAAA  >  CP009273/3840480‑3841013

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.