New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	3919420 =	47 (1.220)	6 (0.160)	4/300	NT	13.3%	coding (396/444 nt)	mioC	FMN‑binding protein MioC
	?	CP009273	3919632 =	33 (0.900)					coding (184/444 nt)	mioC	FMN‑binding protein MioC

CGCACTGCCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACAGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACTTATTTGAGTAAATTAACCCACGATCCCAGCCATTCTTCTGCCGGATCTTCCGGAATGTCGTGATCAAGAATGTTGATCTTCAGTGTTTCGCCTGTCTGTTTTGCACCGGAATTTTTGAGTTCTGCCTCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCTGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAA  >  CP009273/3919151‑3919687                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                            cGCACTGCCCTGTGGATAATAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACAGTTGTTGTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACTTATTTGAGTAACTTAACCCACGCTCACAGCCATTCTTCTGCAGGATCTTCCgg                                                                                                                                                                                                                                                                        >  1:569040/1‑275 (MQ=255) cGCACTGCCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGAACAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACAGTTGTTCTTTGGATAACTACTTGTTGATCAAAGCTTCCTGACAGAGTTATCCACCGTAGATCGCACGATCTGTATACTTATTTGAGTAAATTAACCCACGATCCCAGCCATTATTCTGCCGGATCTTCAgg                                                                                                                                                                                                                                                                        >  1:35589/1‑275 (MQ=255)                    cAAGGATCCTGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACAGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACTTATTTGAGTAAATTAACCCACGATCCCAGCCATTCTTCTGCCGGATCTTCCGGAATGTCGTGATCAAGAATg                                                                                                                                                                                                                                                     <  1:126999/275‑1 (MQ=255)                         atgcGGCTTTTAAGATCAACAACATGGAATGGCTCATTAACTGTGAATGATCGGTGATGCTGGACGGTGTAAGCTGGGATCAGAATGAGGGCTTATACACAACTCAAAGACAGAACAACAGTTGTTCTTTGGATCACTACTGGTCGATCCAACCTTCCTGCCTGATTTATCCCTCGGAGACCGCTCGACCGGATTACCACTGTGCGTAAATTACTCAACTATCCAAGCCATTGTACTGCGTCATCTGCCGGAATGTCGTGTGCAAGAATGGTGag                                                                                                                                                                                                                                                >  2:44276/4‑274 (MQ=255)                                         caacaaCCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACAGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACATTAGATCGCACGATCTGTATACTTATTTGAGTAAATTAACCCACGATCCCAGCCATTCTTCTGCCGGATCTTCCGGAATGTCGTGATCAAGAATGTTGATCTTCAGTGTTTCGCct                                                                                                                                                                                                                                >  1:624908/1‑275 (MQ=255)                                                                           tCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACAGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATCCTTATTTGAGTAAATTAACCCACGATCCCAGCCATTCTTCTGCCGGAACTTCCGGAATGTCGTGATCAAGAAGGTTAATCTACAGTGTTTCGCCTGTCTGTTTTGCACCGGAATTTTTGAGTTCTTccg                                                                                                                                                                                              >  2:685811/1‑274 (MQ=255)                                                                           tCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACAGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACTTATTTGAGTAAATTAACCCACGATCCCAGCCATTCTTCTGCCGGATCTTc                                                                                                                                                                                                                                                                           >  2:88033/1‑198 (MQ=255)                                                                               tGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACAGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACTTATTTGAGTAAATTAACCCACGATCCCAGCCATTCTTCTGCCGGATCTTCCGGa                                                                                                                                                                                                                                                                       <  1:88034/198‑1 (MQ=255)                                                                                       gACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACAGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACTTATTTGAGTAAATTAACCCACGATCCCAGCCATTCTTCTGCCGGATCTTCCGGAATGTCGTGATCAAGAAt                                                                                                                                                                                                                                                      >  2:387125/1‑207 (MQ=255)                                                                                           gTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACAGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACTTATTTGAGTAAATTAACCCACGATCCCAGCCATTCTTCTGCCGGATCTTCCGGAATGTCGTGATCAAGAATGTTg                                                                                                                                                                                                                                                  <  1:387131/207‑1 (MQ=255)                                                                                            tataAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACACCAGTTGTTCTTTGGATAACTATCGGTTGATCCAATCTTCCTGTCAGAGTTATCCACAGTAGATCGCACGATCTGTATACTTATTTGAGTAAATTAACCCACGATCCCAGCCATTCTTCTGCCGGATCTTCCGGCATGTCGTTATCAAGAATGTTGATATTAAGTTTTTCGCCTTTCTTTTTTGAAACGGAGTTTTTGAGTTCTGCTTCGAGTTTNTCGATATcc                                                                                                                                                                             >  2:278782/1‑275 (MQ=255)                                                                                                   taggATCAGAATGATGGGTTATACACAACTCAAAAACTGAACAACAGTTGTTCTTTGGATAACTACCGGTTGATCCAAGATTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACTTATTTGAGTAAATTAACCCACGATCCCAGCCATTCTTCTGCCGGATCTTCCGGAATGTCGTGATCAAGAATGTTGATCTTCAGTGTTTCGCCTGTCTGTTTTGCACCGGAATTTTTGAGTTCTGCCTCGAGTTTATCGATAGCCCCACaaa                                                                                                                                                                      <  1:685820/273‑1 (MQ=255)                                                                                                   tGGGATCAGAATGAGGGTTTATACACATCTCAAATACTTAACAACAGTTGTTCTTTGGATAACTACCGGTTTATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACTTATTCGAGTAAATTAACCCACGATCCCAGCCATTCTTCTGCCGGATCTTCCGGAATGTCGTGATCAAGAATGTTGATCTTCAGTGTTGCGCCTGTCTGTTTTGCACCGGAATTTTTGAGTTCTGCCTCGAGTTTATCGATAGCCCCACaaa                                                                                                                                                                      <  1:418650/275‑1 (MQ=255)                                                                                                   tGGGATAAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACAGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACTTATTTGAGTAAATTAACCCACGATCCCAGCCATTCTTCTGCCGGATCTTCCGGAATGTCGTGATCAAGAATGTTGATCTTCAGTGTTTCGCCTGTCTGTTTTGCACCGGAATTTTTGAGTTCTGCCTCGAGGTTATCGATAGCCCCACaaa                                                                                                                                                                      <  1:278787/275‑1 (MQ=255)                                                                                                      gATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACAGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACTTATTTGAGTAAATTAACCCACGATCCCAGCCATTCTTCTGCCGGATCTTCCGGAATGTCTTGATCAAGAATGTTGATCTTCAGTGTTTCGCCTGTCTGTTTTGCCCGGGAATTTTTGAGTTCTTCCTCTCGTTTTTCGAttgttcacctcg                                                                                                                                                                      >  2:328814/1‑261 (MQ=255)                                                                                                      gATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACAGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACTTATTTGAGTAAATTAACCCACGATCCCAGCCATTCTTCTGCCGGATCTTCCGGAATGTCGTGATCAAGAATGTTGATCTTCAGTGTTTCGCCTGTCTGTTTTGCACCGGAAt                                                                                                                                                                                                             >  2:30841/1‑233 (MQ=255)                                                                                                      gATAAGAATGAGGTGTTATACACAATACAAAAACTTAACAATAGTTGTTCTTTTGATAACTACCGGTTGATCCAATCTTCCTGACAGAGTTATCCACATTAGATCGCACGATCTGTATACTTATTTGAGTAAATTAACCCACGATCCCAGCCATTCTTCTGCCGGATCTTCCGGAATGTCGTGATCAAGAATGTTGATCTTCAGTGTTTCGCCTGTCTGTTTTGCACCGGAATTTTTGAGTTCTGCCTCGAGTTTATCGAGAGCCCCACAAAAg                                                                                                                                                                    <  2:624899/274‑1 (MQ=255)                                                                                                          aGAATGAGGGGTTATACACAACTCAAAAACTGAACAACAGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACTTATTTGAGTAAATTAACCCACGATCCCAGCCATTCTTCTGCCGGATCTTCCGGAATGTCGTGATCAAGAATGTTGATCTTCAGTGTTTCGCCTGTCTGTTTTGCACCGGAAttttt                                                                                                                                                                                                         <  1:30841/233‑1 (MQ=255)                                                                                                                               cTCAAACACTGAACAACAGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACTTATTTGAGTAAATTAACCCACGATCCCAGCCATTCTTCTGCCGGATCTTCCGGAATGTCGTTATCAAGAATGTTGATCTTCAGTGTTTCGCCTGTCTGTTTTGCACCGGACTTTTTGAGTTCTTCCTCGAGTTTATCGATAGCCCCACAAAAGATGTCATATTCCCGTCTTCCAATAcc                                                                                                                                          >  2:558452/1‑275 (MQ=255)                                                                                                                                gccgaatatgtagcagaacacctggctgaaaagctggaagaggcgggttttaccaccgaaacgctgcacggtccgctgttagaagatttacctgcctcagggatctggcgggttatcagctccacccacggtgccggagataTTCCGGAATGTCGTGATCAAGAATGTTGATCTTCAGTGTTTCGCCTGTCTGTTTTGCACCGGAATTTTTGAGTTTTGCCGCGAGTTTAGCGATAGCACCACAAAAGGTGGCATATTCACGACTGCCAACacct                                                                                                                                         <  2:174524‑M1/133‑2 (MQ=255)                                                                                                                                                aGTTGTTCGTTGGATGACTACAGTTTGATCCAAGCTTCATGACAGAGTTATCCACAGTAGATCGCACGATCTTTATACGTATTTGAGTAAATTAACCCACGATCCCAGCCATTCTTCTGCCGGATCTTCCGGAATGGCGTGATCAAGAATGTTGATCTTCAGTGTTTCGCCTGTCTGTTTTGCACCGGAAGTTTTGAGTTCTGCCTCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGa                                                                                                                         <  1:328820/275‑1 (MQ=255)                                                                                                                                                               aaCTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACTTATTTGAGTAAATTAACCCACGATCCCAGCCATTCTTCTGCCGGATCTTCCGGAATGTCGTGATCAAGAAt                                                                                                                                                                                                                                                      >  2:547401/1‑135 (MQ=255)                                                                                                                                                                 cTACCGGTTGATCCAAGCTTCCTGACAGAGTTTTCCACAGTAGATCGCACGATCTGTATACTTATTTGAGTAAATTAACCCACGATCCCAGCCATTCTTCTGCCGGATCTTCCGGAATGTCGTGATCAAGAATGTTGATCTTCAGTGTTTCGCCTGTCTGTTTAGCACCGGAATTTTTGAGTTNTGCCTCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGc                                                                                                        >  1:550405/1‑275 (MQ=255)                                                                                                                                                                   aCCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACTTATTTGAGTAAATTAACCCACGATCCCAGCCATTCTTCTGCCGGATCTTCCGGAATGTCGTGATCAAGAATGTTg                                                                                                                                                                                                                                                  <  1:547410/135‑1 (MQ=255)                                                                                                                                                                    ccGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACTTATTTGAGTAAATTAACCCACGATCCCAGCCNTTCTTCTGCCGGATCTTCCTGAATGTCGTGATCAAGAATGTTGATCTTCAGTGTTTCGCCTGTCTGTTTTGCACCGGAATTTTTGAGTTCTGCCTCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCtt                                                                                                      <  1:558461/274‑1 (MQ=255)                                                                                                                                                                                      cTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACTTATTTGAGTAAATTAACCCACGATCCCAGCCATTCTTCTGCCGGATCTTCCgg                                                                                                                                                                                                                                                                        >  1:317014/1‑94 (MQ=255)                                                                                                                                                                                          cAGAGTTATCCACAGTAGATCGCACGATCTGTATACTTATTTGAGTAAATTAACCCACGATCCCAGCCATTCTTCTGCCGGATCTTCCGGAATg                                                                                                                                                                                                                                                                    <  2:317008/94‑1 (MQ=255)                                                                                                                                                                                               ttATCCACAGAAGATCGCACGATCTGTATACTTATTTGAGTAAATTAACCCACGATCCCAGCCATTCTTCTGCCGGATCTTCCGGAATGTCGTGATCAAGAATGTTGATCTTCAGTGTTTCGCCTGTCTGTTTTGCACCGGAATTTTTGAGTTCTGCCTCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCTGTTCCTGCAATGCTTCaaagaaagaa                                                                          >  1:719974/1‑273 (MQ=255)                                                                                                                                                                                               ctgcacggttcgctgttagaagattttccttcctcagggatctggctggttatcagctccacccacggttccggagataTTCCGGAATGTCGTGATCAAGAATGTTGATCTTCAGTGTTTCGCCTGTCTGTTTTGCACCGGAATTTTTGAGTTCTGCCTCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCTGTTCCTGCAATGCTTCATagaaagga                                                                          >  1:174527‑M1/80‑275 (MQ=255)                                                                                                                                                                                                                               ctcagggatctggctggttatcagctccacccacggtgccggagataTTCCGGAATGTCGTGATCAAGAATGtt                                                                                                                                                                                                                                                   <  2:714211‑M1/27‑1 (MQ=255)                                                                                                                                                                                                                               ctcagggatctggctggttatcagctccacccacggtgccggagataTTCCGGAATGTCGTGATCAAGAATGTTGATCTTCAGTGTTTCGCCTGTCTGTTTTGCACCGGAATTTTTGAGTTCTGCCTCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCTGTTCCTGCAATGCTTCATagaa                                                                              <  2:436786‑M1/192‑1 (MQ=255)                                                                                                                                                                                                                                aTTTGAGTAAATTAACCCACGATCCCAGCCATTCTTCTGCCGGATCTTCCGGAATGTCGTGATCAAGAATGTTGATCTTCAGTGTTTCGCCTGTCTGTTTTGCACCGGAATTTTTGAGTTCTGCCTCGAGTTTAt                                                                                                                                                                                     >  1:370304/1‑135 (MQ=255)                                                                                                                                                                                                                                aTTTGAGTAAATTAACCCACGATCCCAGCCATTCTTCTGCCGGATCTTCCGGAATGTCGTGATCAAGAATGTTGATCTTCAGTGTTTCGCCTGTCTGTTTTGCACCGGAATGTTTGAGTTCTGCCTCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGAACTGCAGAAAGATAGGGCTTCTGTTCCAGCAATGCTTAAGCGAAAGGAGAAAGGAATTCAGGAataacatttttacctt                                           >  2:557897/1‑260 (MQ=255)                                                                                                                                                                                                                                   tGAGTAAATTAACCCACGATCCCAGCCATTCTTCTGCCGGATCTTCCGGAATGTCGTGATCAAGAATGTTGATCTTCAGTGTTTCGCCTGTCTGTTTTGCACCGGAATTTTTGAGTTCTGCCTCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGAt                                                                                                                                       >  2:710475/1‑178 (MQ=255)                                                                                                                                                                                                                                   tGAGTAAATTAACCCACGATCCCAGCCATTCTTCTGCCGGATCTTCCGGAATGTCGTGATCAAGAATGTTGATCTTCAGTGTTTCGCCTGTCTGTTTTGCACCGGAATTTTTGAGTTCTGCCTCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCTGTTCCTGCAATGCTTCATAGAAAGGAAAAAGGTTGTCCGGAATATCTCCGGCACCgtgggt                                       >  1:85996/1‑274 (MQ=255)                                                                                                                                                                                                                                   tGAGTAAATTAACCAACGATCCAAGCCATTCTTCTGCCGGATCTTCCGGAATGTCGTGATCAAGAATGTTGATCTTCAGTGTTTCGCATGTCTGGTTTGCACCGGAATTTTTGAGTTCTGc                                                                                                                                                                                                >  1:142622/1‑121 (MQ=255)                                                                                                                                                                                                                                   gggatctggctggttatcagctccacccacggtgccggagataTTCCGGAATGTCGTGATCAAGAATGTTGATc                                                                                                                                                                                                                                               >  1:714221‑M1/44‑74 (MQ=255)                                                                                                                                                                                                                                   gggatctggctggttatcagctccacccacggtgccggagataTTCCGGAATGTCGTGATCAAGAATGATGATCTTCAGTGTTTCGCCTGTCTGTTTTGCACCGGAATTTTTGAGTTCTGCCTCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCTGTTCCTGCAATGCTTCATagaaagga                                                                          >  1:436793‑M1/44‑239 (MQ=255)                                                                                                                                                                                                                                    gAGTAAATTAACCCACGATCCCAGCCATTCTTCTGCCGGATCTTCCGGAATGTCGTGATCAAGAATGTTGATCTTCAGTGTTTCGCCTGTCTGTTTTGCACCGGAATTTTTGAGTTCTGCCTCGAGTTTATCGAt                                                                                                                                                                                 <  2:370298/135‑1 (MQ=255)                                                                                                                                                                                                                                     aGTAAATTAACCCACGATCCCAGCCATTCTTCTGCCGGATCTTCCGGAATGTCGTGATCAAGAATGTTGATCTTCAGTGTTTCGCCTGTCTGTTTTGCACCGGAATTTTTGAGTTCTGCCTCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACAGCCAATACCGATTGCGCCANAGCGGACTGCAGAAAGATCGGGCTTCTGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGa                                    >  1:555435/1‑275 (MQ=255)                                                                                                                                                                                                                                       tAAATTAACCCACGATCCCAGCCATTCTTCTGCCGGTTCTTCCGGAATGTCGTGATCAAGAATGTTGATCTTCAGTGTTTCGCCTGTCTGTTTTGCACCGGAATTTTTGAGTTCTGCCTCg                                                                                                                                                                                            <  2:142621/121‑1 (MQ=255)                                                                                                                                                                                                                                       tAAATTAACCCACGATCCCAGCCATTCTTCTGCCGGATCTTCCGGAATGTCGTGATCAAGAATGTTGATCTTCAGTGTTTCGCCTGTCTGTTTTGCACCGGAATTTTTGAGTTCTGCCTCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTgcg                                                                                                                                   <  1:710485/178‑1 (MQ=255)                                                                                                                                                                                                                                          nnaagagacggctCCCAGCCATTCTTCTGCCGTTTCTTCCGGAATTTCTTGATCAAGATTGTTGTTTTTCTGTGTTTTGCCTGTCGGTTTTGCACCGGACTTTTTTAGTTCTGCCTAGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGCCTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCTGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCt                                 <  2:308022/261‑1 (MQ=255)                                                                                                                                                                                                                                          aTTAACCCACGATCCCAGCCATTCTTCTGCCGGATCTTCCGGAATGTCGTGATCAAGAATGTTGATCTTCAGTGTTTCGCATGTCTGTTTTGCACCGGAATTTTTGAGTTCTTCCTCGAGTTTATCGATAGCCCCACAACAGGTGTCATATTCACGACTGCCAATACCGATTGTGCCAAATCGGACTGCCGAAAGAGCg                                                                                                           >  2:127192/1‑199 (MQ=255)                                                                                                                                                                                                                                             ctcccACGATCCCTGTTATTCTTCTGCCGGATCTTCCGGAATGTCGTGTTCAAGTATGTTGTTCTTCAGTGTTTCGCCTGTCTGTTTTGCACCGGAATTTTTGAGTTCTGCCTCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTTCAGAAAGATCGGGCTTCTGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATaa                            <  1:44276/273‑1 (MQ=255)                                                                                                                                                                                                                                              aCCGACGATCCCAGCCATGCTTAGGCCGGATCTGCCGGAATGTCGTGATCAAGAATGTTGAACTTCAGTGGTTCGCCTGTCTGTTTTGCACCGGAATTTTTGAGTTCTGCCTCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGcg                                                                                                       <  1:127193/199‑2 (MQ=255)                                                                                                                                                                                                                                                      tctcacgctttctttTGCCGGTTCTTCCGGTTTTTCGTGATCAAGAATGTTGTTCTTCAGTGTTTCGCCTTTTTGTTTTGCACCGGAATTTTTGAGTTCTGCCTCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCTGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAAccagccag                    <  2:85995/265‑1 (MQ=255)                                                                                                                                                                                                                                                              aTTCTTCTGCCGGATCTTCCGGAATGTCGTGATCAAGAATGTTGATCTTCAGTGTTTCGCCTGTCTGTTTTGc                                                                                                                                                                                                                     >  1:158767/1‑73 (MQ=255)                                                                                                                                                                                                                                                                tcttctGCCGGATCTTCCGGAATGTCGTGATCAAGAATGTTGATCTTCAGTGTTTCGCCTGTCTGTTTTGCACCGGAATTTTTGAGTTCTGCCTCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCTGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCgtgggtgg                                     >  1:308028/1‑247 (MQ=255)                                                                                                                                                                                                                                                                tcttctGCCGGATCTTCCGGAATGTCGGGATCAAGAATGTTGATCTTCAGTGTTTCGCCTGTCTGTTTTGCACCGGAATTTTTGAGTTCTGCCTCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCTGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGa                                    >  1:430259/1‑248 (MQ=255)                                                                                                                                                                                                                                                                  ttctGCCGGATCTTCCGGAATGTCGTGATCAAGAATGTTGATCTTCAGTGTTTCGCCTGTCTGTTTTGCCCCg                                                                                                                                                                                                                 <  2:158764/73‑1 (MQ=255)                                                                                                                                                                                                                                                                    cagCCGGGTCTTCGGGAATGTCGTGATCAAGAAGGTTGATCTTCAGTGATGCGCCTGTCTGTTTTGCACCGGAATTTTTGAGGTCTGCCTCGAGTTTATCGATAGCCCGACGAAAGGTGTCATATTCACGACTGTAAATACCGATTGCACCAAAGAGGACTGCAGAAAGATCGGGCTTCTGTTcc                                                                                               >  2:142748/3‑185 (MQ=255)                                                                                                                                                                                                                                                                       ccgtttCTTCCTGATTGTCGTGATCAATAATGTTGATCTTCAGTGTTTCGCCTGTCTGTTTTGCACCGGAATTTTTGAGTTCTGCCTCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATTCCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCTGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGCGCTGATAACCAGCCAGATCCCTGAGGCAGGTaaa  <  1:447071/270‑1 (MQ=255)                                                                                                                                                                                                                                                                       ccGGGTCTTCCGGAATGTCGTGATCAAGAATGTTGATCTTCAGTGTTTCGCCTGTCTGTTTTGCACCGGAATTTTTGAGTTCTGCCTCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCTGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTaaa  <  1:382094/275‑1 (MQ=255)                                                                                                                                                                                                                                                                        cGGATCTTCCGGAATGTCGTGATCAAGAATGTTGATCTTCAGTGTTTCGCCTGTCTGTTTTGCACCGGAATGTTTGAGTTCTGCCTCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCTGTTCCTGCa                                                                                           <  1:142749/185‑1 (MQ=255)                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                            CGCACTGCCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACAGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACTTATTTGAGTAAATTAACCCACGATCCCAGCCATTCTTCTGCCGGATCTTCCGGAATGTCGTGATCAAGAATGTTGATCTTCAGTGTTTCGCCTGTCTGTTTTGCACCGGAATTTTTGAGTTCTGCCTCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCTGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAA  >  CP009273/3919151‑3919687

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.