New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | CP009273 | 3962895 = | 42 (1.090) | 4 (0.110) | 4/296 | NT | 9.6% | coding (505/1047 nt) | wzzE | Entobacterial Common Antigen (ECA) polysaccharide chain length modulation protein |
? | CP009273 | 3963028 = | 36 (0.990) | coding (638/1047 nt) | wzzE | Entobacterial Common Antigen (ECA) polysaccharide chain length modulation protein |
AACATGGCTTCTGCCGACCAACCATCGGTCATGGACGAAGCCTATAAAGAGTTTGTTATGCAACTGGCCTCGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTACAAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAG‑CTGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGAGCAGCATAATATTTCGCGCAGTGCGACAGATGTACCTGCCGAGGAATTACCTGATTCAGA > CP009273/3962649‑3963154 | aaCATGGCTTCTGCCGACCAACCATCGGTCATGGACGAAGCCTATAAAGAGTTTGTTATGCAACTGGCCTCGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTACAAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTAGCTGGATGAAATGGTTAACAACATCCCGATTATCACCGGAGACTTTACCCGCGCGGGAAAGGACAGCGTGAAGCTGATTGCCGAACCCCCACACGGCGCTAATCACCTGGTACGgtagta > 2:6269/1‑275 (MQ=255) aCATGGCTTATGGCGACCAACCATCGGTCATTGACGAATTCTATAAAGAGTTTGTTATGCAACTGGACTCGTGGGATACACGCAGAGAGTTCTGGCTGCAAACCGACTATTACAAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTAt < 1:442935/275‑1 (MQ=255) cgattctgatcatagtcgagatcaaaggccggaccgacggcctgtaaattttccagtcgagcctgaagcattggacgcccaagcaggaacatttctgaatcaggtaattcctcggcaggtacatctgtcgcactgcgcgaaatattatgctgctcagcaattttcagcgcctgctcaatgctgttcatccggcggtcgtagatggctttcgccacctcttCCt > 2:156581‑M1/221‑223 (MQ=255) tttGTTATGCAAGTGTCCTCGTGGTATACCCGCAGCGAGTTCTGGCTGCACACCGCCTATTACAAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAGTCACATCCAGTTTCTCCCTGAAGACTCTACCCGCGTGGTCAATTACAGCGTGAAGATTATTTCAGAAACCGTGCTTCACGCTAATAACATGTTACGCAAGTATTTAGCTTTTGCCATGCATGGTGACGCCTTCCATCTGAATGATGAG‑TTg > 2:251076/1‑273 (MQ=255) ttATGCAACTGGCCTCGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTACAAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCt < 2:269847/194‑1 (MQ=255) tACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTACAAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCGTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGAGGAG‑CTGAAAGGCGCATGGGCGGCGCGTACCATc > 1:453399/1‑274 (MQ=255) gCAAACCGACTATTACAAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAG‑CTGAAAGGCGCATGGGCGGCGCGTAc > 2:73773/1‑249 (MQ=255) aCCGACTATTACAAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAG‑CTGAAAGGCGCATGGGCGGCGCGTACCATc < 1:73774/249‑1 (MQ=255) aCAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTAACCGCGCGGTCAATGACAGCGTGCAGCTTATTGCCGAAACCGAGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAG‑CTGACAGGCGCATGGGCGGCGCGTAACATCCAGATGAAAGCTCAGGTGAAACGTCAGGAAGAGGTGGCGa > 1:185991/1‑275 (MQ=255) cGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCgcgc > 1:121645/1‑127 (MQ=255) tggtggGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGa < 2:121644/127‑1 (MQ=255) cAGCCAAGCCGATGCGGCGTTGCTGGATTAAATGATTAACAACCTCCAGTTTATCCCCGGAGACTGTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAG‑CTGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAGGAGGTGGCGAAAGCCATCTACGAccgc < 1:411493/274‑1 (MQ=255) cAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGtt > 2:137822/1‑129 (MQ=255) gcaggtacatctgtcgcactgcgcgaaatattatgctgctcagcaattttcagcgcctgctcaatgctgttcatccggcggtcgtagatggctttcgccacctcttCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAG‑CTGAAAGGCGCa < 1:139000‑M1/87‑1 (MQ=255) gCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGt < 1:137823/129‑1 (MQ=255) gtacatctgtcgcactgcgcgaaatattatgctgctcagcaattttcagcgcctgctcaatgctgttcatccggcggtcgtagatggctttcgccacctcttCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAG‑CTGAAAGGCGCATggg > 2:138999‑M1/103‑193 (MQ=255) aTGCGGCGTTGCTGGCTGAAATGAATAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAG‑CTGAAAGNCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCg > 1:489724/1‑245 (MQ=255) aTGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTgc > 1:492211/1‑142 (MQ=255) ggcgTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTgccagc < 2:492204/142‑1 (MQ=255) aTTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAG‑CTGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTg < 1:391655/274‑1 (MQ=255) ttAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAG‑CTGAAAGGCGCATGggcgg > 2:667249/1‑171 (MQ=255) ggaacagcATACAGTTTCTCCCCGGAGACTTTACTAGCGCGTTCAAGGACAGCGGTAAGCGTATTTCCGAAACTGCGCCTGACGCTAATAACCTGTTGCGCCAGTATTTTGGTCTTGCCAGCCACCCGGCGGGCAGCCAATATAATCATGAGTCTTATACAC‑AATTGACGCCGCCGACCAACCAGATGAAAGCTCTGGTGAAGCGACAGGAAGAGGTAGAGAAAACCAACGACGACCGCCGGATGAACAGCATTGACGAGGCCCGAAAAAtagat > 2:114023/3‑271 (MQ=255) caacaTCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAG‑CTGAAAGGCGCATGGGCGGcgcg < 1:667258/171‑1 (MQ=255) tCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTgc > 2:323107/1‑109 (MQ=255) tCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAG‑CTGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAgg > 2:168555/1‑189 (MQ=255) gTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTgccagc < 1:323113/109‑1 (MQ=255) gTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAG‑CTGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGaa < 1:168558/189‑1 (MQ=255) tttATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAANCTTATTGCCGAAACCGCGACTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAG‑CTGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGTTGAAGCGTCAGGAAGCGGTGGCGAAAGCCATCTACGAACGCCgg < 1:532868/228‑1 (MQ=255) caattttcagcgcctgctcaatgctgttcatccggcggtcgtagatggctttcgccacctcttCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTgccagcc < 1:212658‑M1/46‑1 (MQ=255) tttcagcgcctgctcaatgctgttcatccggcggtcgtagatggctttcgccacctcttCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCg > 2:212654‑M1/60‑109 (MQ=255) cccGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGTCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAG‑CTGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGAGCAGCATAATATTTcgcg < 1:383115/275‑1 (MQ=255) cccGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGGTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAG‑CTGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGAGCAGCATAATATTTcgcg < 1:447874/275‑1 (MQ=255) cgcgGTCAATGACAGCGTGAAGCTTATTGCCGAATCCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAG‑CTGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCg > 1:462353/1‑184 (MQ=255) cgcgGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGc > 2:571755/1‑48 (MQ=255) cgcgGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAG‑c > 1:273013/1‑116 (MQ=255) cgcgGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAG‑CTGAAAGGCGCATGGgcggcg > 1:478613/1‑136 (MQ=255) cgGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGaa > 2:105404/1‑106 (MQ=255) gTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCtaat < 1:571764/48‑1 (MQ=255) gTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAG‑CTGaa < 2:273008/116‑1 (MQ=255) gTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAG‑CTGAAAGGCGCATGGGCGGCGCGTa < 2:478606/136‑1 (MQ=255) gTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAG‑CTGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAg < 2:462346/184‑1 (MQ=255) cAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAatgat < 1:105405/106‑1 (MQ=255) cGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAAc > 1:48835/1‑40 (MQ=255) cGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAG‑CTGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGACGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGAGCAGCATAATATTTCGCGCAGTGCGACAGATGTACCTGCCGAGCaaaaa > 1:577883/1‑271 (MQ=255) aaGCTTATTGCCGAAACCGCGCCTGACGCTAATAAc > 1:710539/1‑36 (MQ=255) aaGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGt < 2:48835/40‑1 (MQ=255) ttATTGCCGAAACCGCGCCTGACGCTAATAACCTGt < 2:710529/36‑1 (MQ=255) aTTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTGGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAG‑CTGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGAGCAGCATAATATTTCGCGCAGTGCGACAGATGTACCTGCCGAGGAATTACCTGATTCAGa > 1:692172/1‑275 (MQ=255) tGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTg > 1:375524/1‑65 (MQ=255) gAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGcagc < 2:375518/65‑1 (MQ=255) | AACATGGCTTCTGCCGACCAACCATCGGTCATGGACGAAGCCTATAAAGAGTTTGTTATGCAACTGGCCTCGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTACAAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAG‑CTGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGAGCAGCATAATATTTCGCGCAGTGCGACAGATGTACCTGCCGAGGAATTACCTGATTCAGA > CP009273/3962649‑3963154 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |