New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	3967939 =	33 (0.860)	4 (0.110)	4/300	NT	10.1%	coding (113/675 nt)	wecD	TDP‑fucosamine acetyltransferase
	?	CP009273	3968052 =	40 (1.090)					coding (226/675 nt)	wecD	TDP‑fucosamine acetyltransferase

ACGGTGGAAAAACGCCAGGGCTTTAAGATTGCCTGCCTGGAAGAGATTGCCTGGCGTAACGGCTGGCTCGATGACGAGGGTGTGAAGCGTGCTGCCAGTTCATTAGCGAAAACTGGCTACGGCCAATATCTGCTGGAGTTACTTCGTGCCCGTCCGCGCCAGTATTGAGCCACTAACCTGGGAAAACGCCTTCTTTGGTGTTAACAGCGCCATCGTGCGCATTACGTCTGAAGCACCGCTCCTGACGCCAGACGCGTTAGCGCCGTGGTCACGGGTGCAGGCCAAAATTGCGGCATCAAATACGGGTGAACTGGATGCCCTGCAACAGCTGGGATTCTCCCTGGTAGAAGGTGAAGTTGATTTGGCGCTACCCGTGAACAATGCCAGTGATAGCGGTGCTGTAGTGGCACAAGAGACCGATATTCCCGCATTACGTCAGTTAGCCAGCGCCGCATTTGCGCAAAGCCGTTTTCGTGCGCCGTGGTATGCGCCTGACGCCAGCAGTCGCTTTTATGCACAGTGGATTGAAA  >  CP009273/3967682‑3968211                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                                 aCGGTGGAAAAACGCCAGGGCTTTAAGATTGCCTGCCTGGAAGAGATTGCCTGGCGTAACGGCTGGCTCGATGACGAGGGTGTGAAGCGTGCTGCCAGTTCATTAGCGAAAACTGGCTACGGCCAATATCTGCTGGAGTTACTTCGTGCCCGTCCGCGCCAGTATTGCGCCACTAACCTGGGAAAACGCCTTCTTTGGTGTGAACAGCGCCATCGTGCGCATTGAGTGTGAAGCATCTCTCCGGCCCCCATACGCGGTAGCGcctgggcgacgcc                                                                                                                                                                                                                                                                 >  2:721538/1‑264 (MQ=255)    gTGGAAAAACGCCAGGGCTTTAAGATTGCCTGCCTGGAAGAGATTGCCTGGCGTAACGGCTGGCTCGATGACGAGGGTGTGAAGCGTGCTGCCAGTTCATTAGCGAAAACTGGCTACGGCCAATATCTGCTGGAGTTACTTCGTGCCCGTCCGCGCCAGTATTGAGCCACTAACCTGGGAAAACGCCTTCTTTGGTGTTAACAGCGCCATCGTGCGCATTACGTCTGAAGCACCGCTCCTGACGCCAGACGCGTTAGCGCCGTGGTCACGGGTGc                                                                                                                                                                                                                                                              >  1:341998/1‑275 (MQ=255)                             ttGCCTGCCTGGAAGAGATTGCCTGGCGTAACGGCTGGCTCGATGACGAGGGTGTGAAGCGTGCTGCCAGTTCATTAGCGAAAACTGGCTACGGCCAATATCTGCTGGAGTTACTTCGTGCCCGTCCGCGCCAGTATTGAGCCACTAACCTGGGAAAACGCCTTCTTTGGTGTTAACAGCGCCATCGTTCGCATTACGTCTGAAGCACCGCCCCTGACGCCAGACGCGTTAGCGCCGTGGGCACGGGTGCAGGCCACAATTGCGGCATCACATa                                                                                                                                                                                                                                      >  2:661695/1‑274 (MQ=255)                              tgcctgccTGGAAGAGATTGCCTGGCGTAACGGCTGGCTCGATGACGAGGGTGTGAAGCGTGCTGCCAGTTCATTCGCGAAAACTGGCTACGGCCAATATCTGCTGGAGTTACTTCGTGCACGTCCGCGCCAGTATTGAGCCAATAACCTGGGAAAACGCCTTATTTGGTGTTAACAGCGCCATCGTGCGCATTACGTACAAAGCACCGCCACTGACGCCAGACGCGTAAGCGCCGCGGGCACGGGGGCAGGCCCACATTGcagactcaacca                                                                                                                                                                                                                                      >  2:323700/1‑262 (MQ=255)                                                  ccTGGCGTAACGGCTGGCTCGATGACGAGGGTGTGAAGCGTGCTGCCAGTTCATTAGCGAAAACTGGCTACGGCCAATATCTGCTGGAGTTACTTCGTGCCCGTCCGCGCCAGTATTGAGCCACTAACCTGGGAAAACGCCTTCTTTGGTGTTAACAGCGCCATCGTGCGCATTACGTCTGAAGCACCGCTCCTGACGCCAGACGCGTTAGAGACGTGGTCACGGGTGCAGGCCAAAATTGCGGCATCAAATCCGGGTGAAGTGGNGGcccgccc                                                                                                                                                                                                                >  2:274898/1‑271 (MQ=255)                                                     gggggaaCGGGTGGTGCGGTGACGGGGGTGTGAGGCGTGCGGCCAGTTCTTTAGCGAAGACGGGCTAGGGCCAATAGCGGCTGGAGTTACTTCGTGCCCGTCCGCGCCAGTAGTGAGCCACTAACCTGGGAAAACGCCTTCTTTGGTGTTAACAGCGCCATCGTGCGCATTACGTCTGAAGCACCGCTCCTGACGCCAGACGCGTTAGCGCCGTGGTCACGGGTGCAGGCCAAAATTGCGGCATCAAATACGGGTGAACTGGATGCCCTGCAAc                                                                                                                                                                                                              <  2:631326/269‑1 (MQ=255)                                                      gCGTAACGGTTGGTTCGATGACGAGGGTGTGAAGCGTGCTGCCAGTTCATTAGCGAAAACTGGCTACGGCCAATATCTGCTGGAGTTACTTCGTGCCCGTCCGCGCCAGTATTGAGCCACTAACCTGGGAAAACGCCTTCTTTGGTGTTAACAGCGCCATCGTGCGCATTACGTCTGAAGCACCGCTCCTGACGCCAGACGCGTTAGCGCCGTGGTCACGGGTGCAGGCCAAAATTGCGGCATCAAATACGGGTGAACTGGATGCCCTGCa                                                                                                                                                                                                                <  1:274903/271‑1 (MQ=255)                                                            cGGCTGGCTCGATGACGAGTGTGTGAAGCGTGCTGCCAGTTCATTAGCGAAAACTGGCTACGGCCAATATCTGCTGGAGTTACTTCGTGCCCGTCCGCGCCAGTATTGAGCCACTAACCTGGGAAAACGCCTTCTTTGGTGTCAACAGCGCCATCGTGCGCATTACGTCTGAAGCACCGCTCCTGACGCCAGACGCGTTAGCGCCGTGGTCACGGGTGCAGGCCAAAATTGCGGCATCAAATACGGGTGAACTGGATGCCCTGCAACAGCTGGGa                                                                                                                                                                                                      >  1:570156/1‑275 (MQ=255)                                                                                   tgAAGCGTGCTGCCAGTTCATTAGCGAAAACTGGCTACGGCCAATATCTGCTGGAGTTACTTCGTGCCCGTCCGCGCCAGTATTGAGCCACTAACCTGGGAAAACGCCTTCTTTGGTGTTAACAGCGCCATCGTGCGCATTACGTCTGAAGCACCGCTCCTGACGCCAGACGCGTTAGCGCCGTgg                                                                                                                                                                                                                                                                        >  2:262806/1‑186 (MQ=255)                                                                                       gCGTGCTGCCAGTTCATTAGCGAAAACTGGCTACGGCCAATATCTGCTGGAGTTACTTCGTGCCCGTCCGCGCCAGTATTGAGCCACTAACCTGGGAAAACGCCTTCTTTGGTGTTAACAGCGCCATCGTGCGCATTACGTCTGAAGCACCGCTCCTGACGCCAGACGCGTTAGCGCCGTGGTCAc                                                                                                                                                                                                                                                                    <  1:262811/186‑1 (MQ=255)                                                                                          tgctgcCAGTTCATTAGCGAAAACTGGCTACGGCCAATATCTGCTGGAGTTACTTCGTGCCCGTCCGCGCCAGTATTGAGCCACTAACCTGGGAAAACGCCTTCTTTGGTGTTAACAGCGCCATCGTGCGCATTACGTCTGAAGCACCGCTCCTGACGCCAGACGCGTTAGCGCCGTGGTCACGGGTGCAGGCCAAAATTGCGGCATCAAATACGGGGGAACTGGATGCCCTGCAACAGCTGGGATTCTCCATGGTAGAAGGTGAAGTTGATTTg                                                                                                                                                                        >  1:68442/1‑275 (MQ=255)                                                                                                         agggAAAACCGACGACGGCCCATCTCTGCTGGTGTTACTTCGTGCCCGTCCTCTCCAGTATTGAGCCACTAACCTGGGAAAACGCCTTATTTGGTGTTAACAGCGCCAGCGTGCGCATTACGTCTGAAGCACCGCTCCTGACGCCAGACGCGTTAGCGCCGTGGTCACGGGTGCAGGCCAAAATTGCGGCATCAAATACGGGTGAACTGGATGCCTTGCAACAGCTGGGATTCTCCCTGGTAGAAGGTGAAGTTGATTTGGCGCTACCCGTGaa                                                                                                                                                          <  2:570147/271‑1 (MQ=255)                                                                                                              accggggcganacccAATAGCTGCTGGTGGTCCTTCGCGCCCGGCCGCGCCAGTTTTGTGCCACTAGCCTGGGAAAACGCCTTCTGTGGTGTTAACAGCGCCATCGTGCGCATTACGTCTGAAGCACCGCTCCGGACGCCAGACGCGTTAGCGCCGTGGTCACGGGTGCAGGCCAAAATTGCGGCATCAAATACGGGTGAACTGGATGCCCTGCAACAGCTGGGATTCTCCCTGGTAGAAGGTGAAGTTGATTTGGCGCTACCCGTGAACAATg                                                                                                                                                     <  2:68441/261‑1 (MQ=255)                                                                                                                         ggCCAATATCTGCTGGAGTTACTTCGTGCCCGTCCGCGCCAGTATTGAGCCACTAACCTGGGAAAACGCCTTCTTTGGTGTTAACAGCGCCATCGTGCGCATTACGTCTGAAGCACCGCTCCTGACGCCAGACGCGTTAGCGCCGTGGTCACGGGTGCAGGCCAAAATTGCGGCATCAAATACGGGTGAACTGGATGCCCTGCAACAGCTGGGATTCTCCCTGGTAGAATGTGAAGTTGATTTGgcgc                                                                                                                                                                    >  2:552227/1‑248 (MQ=255)                                                                                                                         ggCCAATATCTGCTGGAGTTACTTCGTGCCCGTCCGCGCCAGTATTGAGCCACTAACCTGGGAAAACGCCTTCTTTGGTGTTAACAGCGCCATCGTGCGCATTACGTCTGAAGCACCGCTCCTGACGCCAGACGCGTTAGCGCCGTGGTCACGGGTGCAGGCCAAAATTGCGGCATCAAATACGGGTGAACTGGATGCCCTGCAACAGCTGGGATTCTCCCTGGTAGAAGGTGAAGTTGATTTGgcgc                                                                                                                                                                    <  1:552236/248‑1 (MQ=255)                                                                                                                                         cgTTACTTCGTGCCCGTCCTCGCCAGTATTGAGCCACTAACCTGGGAAAACGCCTTCTTTGGTGTTAACAGCGCCATCGTGCGCATTACGTCTGAAGCACCGCTCCTGACGCCAGACGCGTTAGCGCCGTGGTCACGGGTGCAGGCCAAAATTGCGGCATCAAATACGGGTGAACTGGATGCCCTGCAACAGCTGGGATTCTCCCTGGTAGAAGGTGAAGTTGATTTGGCGCTACCCGTGAACAATGCCAGTGATAGCGGTGCTGTAGTGGcaca                                                                                                                         <  1:323706/274‑1 (MQ=255)                                                                                                                                                                             cTAACCTGGGAAAACGCCTTCTTTGGTGTTAACAGCGCCATCGTGCGCATTACGTCTGAAGCACCGCTCCTGACGCCAGACGCGTTAGCGCCGTGGTCACGGGTGCAGGCCAAAATTGCGGCAACAAATACGGGTGAACTGGATGCCCTGCAACAGATGGGATTCTCACTGGTAGAAGGTGAAGTTGATTTGGAGCTACCCGTGAACAATGCCAGTGATAGCGGTGCTGTAGTGGCACAAGAGACCGATATTCACGCATTACGTCAGTTAGCCAg                                                                                     >  1:438097/1‑275 (MQ=255)                                                                                                                                                                                       aaaaCGCCTTCTTTGGTGTTAACAGCGCCATCGTGCGCATTACGTCTGAAGCACCGCTCCTGACGCCAGACGCGTTAGCGCCGTGGTCACGGGTGCAGGCCAAAATTGCGGCATCANATACGGGTGAACTGGATGCCCTGCAACAGCTGGGATTCTCCCTGGTAGAAGGTGAAGTTGATTTGGCGCTACCCGTGAACAATGCCAGTGATAGCGGTGCTGTAGTGGCACAAGAGACCGATATTCCCGCATTACGTCAGTTAGCCAGcgccgccatc                                                                           <  1:661704/275‑5 (MQ=255)                                                                                                                                                                                          aCGCCTTCTTTGGTGTTAACAGCGCCATCGTGCGCATTACGTCTGAAGCACCGCTCCTGACGCCAGACGCGTTAGCGCCGTGGTCACg                                                                                                                                                                                                                                                                   >  2:671186/1‑88 (MQ=255)                                                                                                                                                                                             ctgacgtaatgcgggaatatcggtctcttgtgccactacagcaccgctatcactggcattgttcacgggTAGCGCCGTGGTCACGGGTGCAGGCCAAAATTGCGGCATCAAATACGGGTGAACTGGATGCCCTGCAACAGCTGGGATTCTCCGTGGTAg                                                                                                                                                                                         <  1:683907‑M1/90‑1 (MQ=255)                                                                                                                                                                                              cttcttTGGTGTTAACAGCGCCATCGTGCGCATTACGTCTTAAGCACCGCTCCTGACGCCAGACGCGTTAGCGCCGTGGTCACGGGTg                                                                                                                                                                                                                                                               <  1:671195/88‑1 (MQ=255)                                                                                                                                                                                                 cgtaatgcgggaatatcggtctcttgtgccactacagcaccgctatcactggcattgttcacgggTAGCGCCGTGGTCACGGGTGCAGGCCAAAATTGCGGCATCAAATACGGGTGAACTGGATGCCCTGCAACAGCTGGGATTCTCCCTGGTAGAAgg                                                                                                                                                                                     >  2:683898‑M1/66‑159 (MQ=255)                                                                                                                                                                                                  ttttgtgggaaCAGCGCCTTCGTGCGCATTACGTCTGAAGCACCGCTCCTGACGCCAGACGCGTGAGCGCCGTGGTCACTGGTGCAGGCCAAAATGGCGGCATCAAAGACGGGTGAACTGGATGCCCTGCAACAGCTGGGATTCTCCCTGGTAGAAGGTGAAGTTGATTTGGCGCTACCCGTGAACAATGCCAGTGATAGCGGTGCTGTAGTGGCACAAGAGACCGATATTCCCGCATTACGTCAGTTAGCCAGCGCCGCATTTCCGCAAAGCCg                                                                <  1:721548/266‑1 (MQ=255)                                                                                                                                                                                                              agggcCATAGTGCGCATTACGTCTGAAGCACCGCTCCTGACGCCAGACGCGTTAGCGCCGTGGTAACGGGTGCAGGCCAAAATTGCGGCATCAAATACGGGTGAACTGGATGCCCTGCAACATCTGGGATTCTCCCTGGTAGAAGGTGAAGTTGATTTGGCGCTACCCGTGAACAATGCCAGTGATAGCGGTGCTGTAGTGGCACAAGAGACCGATATTCCCGCATTACGTCAGTTAGCCAGCGCCGCATTTGCGCAAAGCCGTTTTCGTGCGcc                                                    <  1:621613/272‑1 (MQ=255)                                                                                                                                                                                                                cgcCATCGTGCGCATTACGTCTGAAGCACCGCTCCTGACGCCAGACGCGTTAGCGCCGTGGTCACGGGTGCAGGCCAAAATTGCGGCATCAAATACGGGTGAACTGGATGCCCTGCAACAGCTGGGATTCTCCCTGGTAGAAGGTGAAGTTGATTTGGCGCTACCCGTGAACAATGCCAGTGATAGCGGTGCTGTAGTGGCACAAGAGACCGATATTCCCGCATTACGTCAGTTAGCCa                                                                                      >  1:14529/1‑239 (MQ=255)                                                                                                                                                                                                                     tCGTGCGCATTACGTCTGAAGCACCGCTCCTGACGCCAGACGCGTTAGCGCCGTGGTCACGGGTGCAGGCCAAAATTGCGGCATCAAAt                                                                                                                                                                                                                                       >  2:9334/1‑89 (MQ=255)                                                                                                                                                                                                                         gcgcATTACGTCTGAAGCACCGCTCCTGACGCCAGACGCGTTAGCGCCGTGGTCACGGGTGCAGGCCAAAATTGCGGCATCAAATACgg                                                                                                                                                                                                                                   <  1:9334/89‑1 (MQ=255)                                                                                                                                                                                                                                       aaGCACCGCTCCTGACGCCAGACGCGTTAGCGCCGTGGTCACGGGTGCAGGCCAAAATTGCGGCATCAAATACGGGTGAACTGGATGCCCTGCAACAGCTGGGATTCTCCCt                                                                                                                                                                                              >  2:658567/1‑112 (MQ=255)                                                                                                                                                                                                                                       aaGCACCGCTCCTGACGCCAGACGCGTTAGCGCCGTGGTCACGGGTGCAGGCCAAAATTGCGGCATCAAATACGGGTGAACTGGATGCCCTGCAACAGCTGGGATTCTCCCTGGTAGCAGGTGAAGTTGATTTGGCGCTACCCGTGAACAATGCCAGTGATAGCGGTGCGGTAGTGGCACAAGAGACCGATATTCACGCATTACGTCAGTTAGCCAGCGCCGCATTTTCGCAAAACCGGCTTGGTGCGACGAGGATGGCGCCGGCCGCcaggag                            >  2:194582/1‑274 (MQ=255)                                                                                                                                                                                                                                        ccgctatcactggcattgttcacgggTAGCGCCGTGGTCACGGGTGCAGGCCAAAATTGCGGCATCAAATACGGGTGAACTGGATGCCCt                                                                                                                                                                                                                   <  1:678603‑M1/64‑1 (MQ=255)                                                                                                                                                                                                                                           aCCGCTCCTGACGCCAGACGCGTTAGCGCCGTGGTCACGGGTGCAGGCCAAAATTGCGGCATCAAATACGGGTGAACTGGATGCCCTGCAACAGCTGGGATTCTCCCTGGTa                                                                                                                                                                                          <  1:658576/112‑1 (MQ=255)                                                                                                                                                                                                                                            tatcactggcattgttcacgggTAGCGCCGTGGTCACGGGTGCAGGCCAAAATTGCGGCATCAAATACGGGTGAACTGGATGCCCTGCaa                                                                                                                                                                                                               >  2:678594‑M1/23‑90 (MQ=255)                                                                                                                                                                                                                                             cGCTCCTGACGCCAGACGCGTTAGCGGCGTGGTCTCGGGTGCAGGCCAAAATTGCGGCATCAAATACGGGTGAACTGGATGCCCTGCAACAGCTGGGATTCTCCCTGGTAGAAGGTGAAGTTGATTTGGCGCTACCCGTGAACAATGCCAGTGATAGCGGTGCTGTAGTGTCACAAGAGACCGNTATTCCCGNATTACGTCAGTTAGCCAGCGCCGCATTTGCGCAAAGCCGTTTTCGTGCGCCGTGGTATGCGCCTGACGCCAGCAGCCGCttt                     >  1:481330/1‑275 (MQ=255)                                                                                                                                                                                                                                               cTCCTGACGCCAGACGCGTTAGCGCCGTGGTCACGGGTGCAGGCCAAAATTGCGGCATCAAATACGGGTGAACTGGATGCCCTGCAACAGCTGGGATTCTCCCTGGTAGAAGGTGAAGTTGATTTg                                                                                                                                                                        >  1:158992/1‑126 (MQ=255)                                                                                                                                                                                                                                                   tGACGCCAGACGCGTTAGCGCCGTGGTCACGGGTGCAGGCCAAAATTGCGGCATCAAATACGGGTGAACTGGATGCCCTGCAACAGCTGGGATTCTCCCTGGTAGAAGGTGAAGTTGATTTGgcgc                                                                                                                                                                    <  2:158989/126‑1 (MQ=255)                                                                                                                                                                                                                                                    gACGCCAGACGCGTTAGCGCCGTGGTCACGGGTGCAGGCCAAAATTGCGGCATCAAATACGGGTGAACTGGATGCCCTGCAACAGCTGGGATTCTCCCTGGTAGAAGGTGAAGTTGATTTGGCGCTACCCGTGAACAATGCCAGTGATAGTGGTGCTGTAGTGGCACAAGAGACCGATATTCACGCATTACGTCAGTTAGCCAGCGCCGCATTTGCGCAAAGCCGTTTTCTTGCGACGTGGTATGCGACTGACGCCAGCAGTCGCATTTATg                 >  1:577775/1‑272 (MQ=255)                                                                                                                                                                                                                                                          aGACGCGTTAGCGCCGTGGTCACGGGTGCAGGCCAAAATTGCGGCATCAAATACGGGTGAACTGGATGCCCTGCAACAGCTGGGAtt                                                                                                                                                                                                    >  1:697377/1‑87 (MQ=255)                                                                                                                                                                                                                                                              gcgTTAGCGCCGTGGTCACGGGTGCAGGCCAAAATTGCGGCATCAAATACGGGTGAACTGGATGCCCTGCAACAGCTGGGATTCTcc                                                                                                                                                                                                <  2:697368/87‑1 (MQ=255)                                                                                                                                                                                                                                                                 ttAGCGCCGTGGTCACGGGTGCAGGCCAAAATTGCGGCATCAAATACGGGTGAACTGGATGCCCTGCAACAGCTGGGATTCTCCCTGGTAGAAGGTGAAGTTGATTTGGCGCTACCCGTGAACAATGCCAGTGATAGCGGTGCTGTAGTGGCACAAGAGACCGATATTCCCGCATTACGTCAGTTAGCCAGCGCCGCATTTGCGCAAAGCCGTCTTCGTGCGACGTGGTATGCTCCGGCCGCCAGCAGTCGCTTTTATGcacctgggctttgat  >  2:634797/1‑262 (MQ=255)                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                                 ACGGTGGAAAAACGCCAGGGCTTTAAGATTGCCTGCCTGGAAGAGATTGCCTGGCGTAACGGCTGGCTCGATGACGAGGGTGTGAAGCGTGCTGCCAGTTCATTAGCGAAAACTGGCTACGGCCAATATCTGCTGGAGTTACTTCGTGCCCGTCCGCGCCAGTATTGAGCCACTAACCTGGGAAAACGCCTTCTTTGGTGTTAACAGCGCCATCGTGCGCATTACGTCTGAAGCACCGCTCCTGACGCCAGACGCGTTAGCGCCGTGGTCACGGGTGCAGGCCAAAATTGCGGCATCAAATACGGGTGAACTGGATGCCCTGCAACAGCTGGGATTCTCCCTGGTAGAAGGTGAAGTTGATTTGGCGCTACCCGTGAACAATGCCAGTGATAGCGGTGCTGTAGTGGCACAAGAGACCGATATTCCCGCATTACGTCAGTTAGCCAGCGCCGCATTTGCGCAAAGCCGTTTTCGTGCGCCGTGGTATGCGCCTGACGCCAGCAGTCGCTTTTATGCACAGTGGATTGAAA  >  CP009273/3967682‑3968211

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.