New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	4161841 =	47 (1.220)	5 (0.140)	5/290	NT	10.3%	intergenic (+157/‑144)	rrfB/murB	5S ribosomal RNA of rrnB operon/UDP‑N‑acetylenolpyruvoylglucosamine reductase, FAD‑binding
	?	CP009273	4162088 =	44 (1.240)					coding (104/1029 nt)	murB	UDP‑N‑acetylenolpyruvoylglucosamine reductase, FAD‑binding

GCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCATATCTACAAGCCATCCCCCCACAGATACGGTAAACTAGCCTCGTTTTTGCATCAGGAAAGCAGCTATGAACCACTCCTTAAAACCCTGGAACACATTTGGCATTGATCATAATGCTCAGCACATTGTATGTGCCGAAGACGAACAACAATTACTCAATGCCTGGCAGTATGCAACCGCAGAAGGACAACC  >  CP009273/4161571‑4162109                                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                                             gcggcAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAACTAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTTGGTGAACGCTCTCCTGAGTAGGACAAATCAGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGc                                                                                                                                                                                                                                                                          >  1:89536/1‑275 (MQ=17)                       ccctgccccaagcccGACCGCAGAAGGGCAGCGCCGGAGCGCCGATGGTAGTGTGGGGTCTCCACATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTGCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCGGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGaa                                                                                                                                                                                                                                                     <  2:197248/261‑1 (MQ=11)                           gagccgacacaaccaggaattaatgccagattttccagaccaggcataccttcctgcaaagtgtattttaccagacgatgccagttttctccggctcctacatgtaaataccacgcatcaggttcatcatgaatttcgatacctttgctccggttgatgatcaccgtgccgcgatagtcctccagaaaaagtacattacttccttcacccagaatcagaacgggttttccttatgcggttgcatACTGCCNttcatcaaattaacaacacaccaa                                                                                                                                                                                                                                                <  2:413755‑M1/31‑12 (MQ=255)                                cATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGCGTAGGACAAATCCGCCGGGAGCGGATTTGACCGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCCTAAACTGCCAGGCATCAAAGTAAGCAGAACGCCCTcccg                                                                                                                                                                                                                                           >  2:207575/1‑273 (MQ=12)                                      gtaCTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTNTCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGAt                                                                                                                                                                                                                                     <  1:609804/273‑1 (MQ=17)                                              aaGGGAAACGCCGTAGCGCCGATGGTATTGTGGGGTCTCCCCATGCGGGAGTAGGGAACTGCCAGGCATCAAATAACACGAAAGGCTCAGTNGAAAGCCTGGGTCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCAAGGCATCAAATTAAGTAGAAGGCCATCATGACGGATGGCCtttt                                                                                                                                                                                                                             <  1:527191/275‑1 (MQ=11)                                                       gCCGTGGCGCCGATGGGAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGGTAACGCTCTCATGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCt                                                                                                                                                                                                                    <  1:636130/275‑1 (MQ=19)                                                        ccGGAGAGCCGAGGGGAGTGTGGGGTCTCCCCGTGCGGGAGTAGGGAACGTCCTGGCATCAAAAAAAACGAAAGGCTAAGGCGAAAGACTGGGCCTTTCGTTTTTTCGTTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCGGGGGGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCt                                                                                                                                                                                                                    <  2:294306/274‑1 (MQ=11)                                                        aggaagagtcgttGGTAGTGTGGGGAATCCCAACGCGAGAGTAGGGAACTCCCATGCATCAAATAAAACGAGAGGCTCCTTCGAAAGACTGGGCCTTTCGTTTTAGCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTa                                                                                                                                                                                                                   <  2:490171/263‑1 (MQ=11)                                                                   aTGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAAGCATCAAATTAAGAAGAAGGCCAACCTGACGGATGGCCGTTTTGGGTTTCTACAAAATCTAcc                                                                                                                                                                                                        >  1:294312/1‑275 (MQ=255)                                                                   aTGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGAATTTGAACGTNGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTc                                                                                                                                                                                                         >  1:652623/1‑274 (MQ=39)                                                                      gcataccttcctgcaaagtgtattttactagacgatgccagttttctccggctcctacatgtaaataccacgcatcaggttcatcatgaatttcgatacctttgatccggttgatgatcaccgtgccgcgatagtcctccagaaaaagtacattacttccttcacccagaataagaacgggttgtccttctgcggttgcatACTGCCa                                                                                                                                                                                                                                                                        <  1:534736‑M1/7‑1 (MQ=255)                                                                      gTAGTGTGGGGTCGCCCCATGCGTGAGTAGGGAAGTCACAGGCGTCAAATAAACAGAAAGGCTCGTGCGAAAGACTGGGCCGGTCGTTTTATCGGTGGTTTGTCGGCGACCGCTCTCCTGAGTAGGACAAAGCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTccg                                                                                                                                                                                                       <  2:323610/273‑2 (MQ=14)                                                                          accttcctgcaaagtgtattttaccagacgatgccagttttctccggctcctacatgtaaataccacgcatcaggttcatcatgaatttcgatacctttgatccggttgatgatcaccgtgccgcgatagtcctccagaaaaagtacattacttccttcacccagaataagaacgggttgtccttctgcggttgcatACTGCCAGGCa                                                                                                                                                                                                                                                                    >  2:534728‑M1/198‑208 (MQ=255)                                                                           tgggggTCTCCCCATGTGAGGGTATGGAACTGCCAGACAGCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATTTGTTGTTTTTCGGTGAACGCTCTCCTGNGTAGGACAACTCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTgtcgtc                                                                                                                                                                                                 <  1:664020/272‑1 (MQ=255)                                                                              gggTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGNCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCata                                                                                                                                                                                              >  1:527388/1‑274 (MQ=255)                                                                              gggTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATc                                                                                                                                                                                                                                                                  >  1:692625/1‑206 (MQ=32)                                                                                ggccccccATGGGAGGGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCATATCt                                                                                                                                                                                           <  2:652614/271‑1 (MQ=255)                                                                                  ctcCGCATGGGAGAGGAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCGGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAAt                                                                                                                                                                                                                                                              <  2:692616/206‑1 (MQ=9)                                                                                    ccccATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCATATCTACaa                                                                                                                                                                                       >  1:271017/1‑275 (MQ=255)                                                                                               gtgcgagccatGCCAGCAATAAAAGAAACCGAAAGGCTCAGGCGAAAGCCTTGGCTTTTGGTTTTATCTGTTGTTTGTCGGTGAACGTTATCCGGAGAAGGACAAATCCGCCGGGAGGGGATTTAAACGTGGCAAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCATATCTACAAGCCATccccc                                                                                                                                                                             <  2:89535/264‑1 (MQ=17)                                                                                               agTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGAAGGGTGGCGGNCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCATATCTACAAGCCAAccccc                                                                                                                                                                             >  1:666907/1‑274 (MQ=255)                                                                                                    ggcaaggacAGGAANCAAATAAACAGAAGGGCTCGGTCGAGAGGCTGGGCCTTTTGTTTTATCTGTTGTTTGTCGGTGAACGCGCGCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCATATCTACAAGCCATCCCCCCACAGa                                                                                                                                                                       <  2:527380/267‑1 (MQ=17)                                                                                                                  ttaattAAAACGAAAGGCTCAGTCGAAAGATTGGGCCTTTCGTTTTATCTGTGGTTTGTCGGGGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCATATCTACAAGCCATCCCCCCACAGATACGGTAAACTAg                                                                                                                                                          <  1:438124/269‑1 (MQ=255)                                                                                                                   cAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGAGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCTTTTCTACAAACTCTTCCTGTCGTCATATCTACAAGCCCTACCCCCACAGATACGGTAAACAAGcc                                                                                                                                                        >  1:390485/1‑275 (MQ=255)                                                                                                                    gaaTAAAACGAAATGCTCAGTCGAAAGACTGGGCCTTTTGTTTTATCTGTTGTTTGTCGGTGAACTCTCTCCTGAGTAGGACAAATCCGCCGGGAGCAGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCATATCTACAAGCCATCCCCCCACAGATACGGTAAACTAGCCt                                                                                                                                                       <  1:364426/274‑1 (MQ=255)                                                                                                                                            cgcatcaggttcatcatgaatttcgatacctttgatccggttgatgatcaccgtgccgcgatagtcctccagaaaaagtacattacttccttcacccagaataagaacgggttgtccttctgcggttgcatAc                                                                                                                                                                                                                                                                             <  1:589308‑M1/2‑1 (MQ=255)                                                                                                                                             aGACTGGGCCTTTCGTTTTTTGTGTTTTTTGTCGGGGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCATATCTACAAGCCATCCCCCCACAGATACGGTAAACTAGCCTCGTTTTTGCATCAGGAAAGCAGCt                                                                                                                               <  1:576858/274‑1 (MQ=255)                                                                                                                                                tcaggttcatcatgaatttcgatacctttgatccggttgatgatcaccgtgccgcgatagtcctccagaaaaagtacattacttccttcacccagaataagaacgggttgtccttctgcggttgcatACTGcc                                                                                                                                                                                                                                                                         >  2:589299‑M1/128‑133 (MQ=255)                                                                                                                                                 tGGGTCTTTCGTTTTATCTGTCGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCTAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCATATCTACAAGCCATCCCCCCACAGATACGGTAAACTAGCCTCGTTTTTGCATCAgg                                                                                                                                        <  1:359790/261‑1 (MQ=255)                                                                                                                                                  gggCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCATATCTACaa                                                                                                                                                                                       >  1:322158/1‑213 (MQ=255)                                                                                                                                                      cTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt                                                                                                                                                                                                                        <  1:223286/176‑1 (MQ=31)                                                                                                                                                              aatttcgatacctttgatccggttgatgatcaccgtgccgcgatagtcctccagaaaaagtacattacttccttcacccagaataagaacgggttgtccttctgcggttgcatACTGCCAGGCATc                                                                                                                                                                                                                                                                  <  2:441209‑M1/13‑1 (MQ=255)                                                                                                                                                              aatttcgatacctttgatccggttgatgatcaccgtgccgcgatagtcctccagaaaaagtacattacttccttcacccagaataagaacgggttgtccttctgcggttgcatACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCATATCTACAAGCCATCCCCCCACAGATACGGTAAACTAGCCTCGTTTTTGCATCAGGAAAGCAGCTATGAACCACTCCTTaaaa                                                                                                             <  1:260773‑M1/162‑1 (MQ=255)                                                                                                                                                                  tcgatacctttgatccggttgatgatcaccgtgccgcgatagtcctccagaaaaagtacattacttccttcacccagaataagaacgggttgtccttctgcggttgcatACTGCCAGGCATCAAAt                                                                                                                                                                                                                                                              >  1:441216‑M1/110‑126 (MQ=255)                                                                                                                                                                              ggagAACGCNCTCATGAGGAGGCACAAGCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCATATCTACAAGCCATCCCCCCACAGATACGGTAAACTAGCCTCGTTTTTGCATCAGGAAAGCAGCTATGAACCACTCCTTAAAACCCTGGAACACATTTg                                                                                             <  2:271012/272‑1 (MQ=255)                                                                                                                                                                              ctaccgttgnctatcaccgtgccgcgatagtcctccagaaaaagtacattacttccttcacccagaataagaacgggttgtccttctgcggttgcatACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCATATCTACAAGCCATCCCCCCACAGATACGGTAAACTAGCCTCGTTTTTGCATCAGGAAAGCAGCTATGAACCACTCCTTAAAACCCTGGAACACATTTg                                                                                             >  2:260768‑M1/98‑275 (MQ=255)                                                                                                                                                                                tGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCATATCTACAAGCCATCCCCCCACAGATACGGTAAACTAGCCTCGTTTTTGCATCAGGAAAGCAGCTATGAACCACTCCTTAAAACCCTGGAACACATTTGGc                                                                                           <  1:207579/275‑1 (MQ=255)                                                                                                                                                                                  aaCGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAActct                                                                                                                                                                                                           >  2:214532/1‑161 (MQ=40)                                                                                                                                                                                      ctctCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCt                                                                                                                                                                                                       <  1:214536/161‑1 (MQ=255)                                                                                                                                                                                           aggAGTAGGACAAATCCGCCGGGAGCGGTTTTGAACGTTGGGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCNGGCATCAAATTAAGCAGAATGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCATATCTACAAGCCATCCCCCCACAGATACGGTAAACTAGCCTCGTTTTTGCATCAGGAAAGCAGCTATGAACCACTCCTTAAAGCCCTGGAACACATTTGGCATTGATCATa                                                                                 <  1:561582/272‑1 (MQ=255)                                                                                                                                                                                                gtgccgcgatagtcctccagaaaaagtacattacttccttcacccagaataagaacgggttgtccttctgcggttgcatACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCt                                                                                                                                                                                                       >  1:352849‑M1/80‑151 (MQ=255)                                                                                                                                                                                                  gccgcgatattcctccagaaaaagtacattacttccttcacccagaataagaacgggttgtccttctgcggttgcatACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCATATCTACAAGCCATCCCCCCACAGATACGGTAAACTAGCCTCGTTTTTGCATCAGGAAAGCAGCTATGAACCACTCCTTAAAACCCTGGAACACATTTGGCATTGATCATAATGCTCAg                                                                         >  1:413762‑M1/78‑275 (MQ=255)                                                                                                                                                                                                   gACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCAATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCATATCTACAAGCCATCCCCCCACAGATACGGTAAACTAGCCTCGTTTTTGCATCAGGAAAGCAGCTATAAACCACTCCTTAAAACCCTGGAACACATTTGGCATTGATCATAATGCACAg                                                                         >  1:409748/1‑274 (MQ=255)                                                                                                                                                                                                     cAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTg                                                                                                                                                                                                      >  1:544872/1‑147 (MQ=255)                                                                                                                                                                                                     cAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCATATCTACAAGCCATCCCCCCACAGATACTGNAAACTAGCCTCGTTTTTGCATCAGGAAAGCAGCTATGAACCACTCCTTAAAACCCTAGAACAAATTTGGCATTGATCATAATGCTCacaac                                                                      >  1:559282/1‑271 (MQ=255)                                                                                                                                                                                                         tCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTgtcgt                                                                                                                                                                                                  <  2:544863/147‑1 (MQ=255)                                                                                                                                                                                                                                ttGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCTTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCATATCTACAAGCCATCCCCCCACAGATACGGTAAACTAGCCTCGTTTTTGCATCAGGAAAGCAGCTATGAACCACTCCTTAAAACCCTGGAACACATTTGGCATTGATCATAATGCt                                                                            <  1:573091/242‑1 (MQ=255)                                                                                                                                                                                                                                 tGCGAATCAACCGCACGGAGGGTGTCGGGCAGGACGCCAGACATAAACTGCCCGGCAGCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTATCTACAAACTCTTCCTGTCGTCATATCTACAAGCCATCCCCCCACAGATCCGGTAAACTAGCCCCGTTTTTGCATCAGGAAAGCAGCTATGAACCACTCATTAACACCCTGGAACACATATGCCATTGATCATCATGCTCAGAAAATTGAATGTGCAGAAGCCGAAcagcaa                                           >  2:240564/1‑274 (MQ=37)                                                                                                                                                                                                                                             gCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCATATCTACAAGCCATCCCCCCACAGATACGGTAAACTAGCCTCGTTTTTGCATCAGGAAAGCAGCTATTAACCACTCCTTAAAACCCTGGAACACATTTGGCATTTATCATAATGCTCAGCACATTGTATTTGCCGAAACCTAACAACAATTACCCAATTcc                               >  1:358806/1‑274 (MQ=255)                                                                                                                                                                                                                                                   aGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAAct                                                                                                                                                                                                             >  2:217911/1‑94 (MQ=255)                                                                                                                                                                                                                                                     ggTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTgtcg                                                                                                                                                                                                   >  2:137628/1‑102 (MQ=255)                                                                                                                                                                                                                                                       tGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTc                                                                                                                                                                                                         <  1:217916/94‑1 (MQ=255)                                                                                                                                                                                                                                                       gggcggcaanaaCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCATATCTACAAGCCATCCCCCCACAGATACGGTAAACTAGCCTCGTTTTTGCATCAGGAAAGCAGCTATGAACCACTCCTTAAAACCCTGGAACACATTTGGCATTGATCATAATGCTCAGCACATTGTATGTGCCGAAGACGAACAACAATTACTCAATGCCTGGCAGTATGc                    <  2:264393/264‑1 (MQ=255)                                                                                                                                                                                                                                                        ggCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCATATCTACAAGCCATCCCCCCACAGATACGGTAAACTAGCCTCGTTTTTGCa                                                                                                                                             >  2:442166/1‑153 (MQ=255)                                                                                                                                                                                                                                                         gCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCat                                                                                                                                                                                               <  1:137629/102‑1 (MQ=255)                                                                                                                                                                                                                                                            ggCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCATATCTACAAGCCATCCCCCCACAGATACGGTAAACTAGCCTCGTTTTTGCATCAg                                                                                                                                         <  1:442173/153‑1 (MQ=255)                                                                                                                                                                                                                                                                      ccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCATATCTACAAGCCATCCCCCCCCCTCTACGGTACACTAGCCTCGTTTTTGCATCAGGACCGCAGCTATGCCCCCCTCCTTAAAACCCTGTCCCACCTTTGTCCTTGATCCTAATGCTCCCCCCCTTGTCTGTTCCGCCTCCTACCCACCCTTCCTCCCTGCCTGGCAGTCTGCACCCGccccagga       >  1:388817/1‑266 (MQ=19)                                                                                                                                                                                                                                                                         ccATAAACTGCCAGGCATCAAATTAAGCAGAAGTCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCATATCTACAAGCCATCCCCCCACAGATACGGTAAACTAGCCTCGTTTTTGCATCAGGAAAGCAGCTATGAACCACTCCTTAAAACCCTGGAACACATTTGGCATTGATCATAATGCTCAGCACATTGTATGTGCCGAAGACGAACAACAATTACTCAATGCCTGGCAGTATGCAACCGCAGAAGGACAAcc  <  1:135288/275‑1 (MQ=255)                                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                                             GCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCATATCTACAAGCCATCCCCCCACAGATACGGTAAACTAGCCTCGTTTTTGCATCAGGAAAGCAGCTATGAACCACTCCTTAAAACCCTGGAACACATTTGGCATTGATCATAATGCTCAGCACATTGTATGTGCCGAAGACGAACAACAATTACTCAATGCCTGGCAGTATGCAACCGCAGAAGGACAACC  >  CP009273/4161571‑4162109

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.