| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4289833 = | 64 (1.670) | 5 (0.140) | 5/292 | NT | 7.6% | coding (1015/1467 nt) | mdtP | outer membrane factor of efflux pump |
| ? | CP009273 | 4289997 = | 62 (1.730) | coding (851/1467 nt) | mdtP | outer membrane factor of efflux pump | |||||
CGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCAGCCTGCATTTCTCGCTCGTCGTTGAGCGTTTGCAGACGCGTGCCGTTGACGGCAACGTCACGCACCGCGTTCAGTACTGACTGGTTGTAACGTTCAATCATCATGTTGCTGGCGGCGCGCGTGCCTTCGAGATTGGCATTCAACCGTCCACCGTCAAACAGCGGCAATTTCAGACCCGGGATGAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGGTATGCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCCGCGCGGAATCCACCTGATCTAATGACGCCTGAACATACCAGCGCATGGCTTGCAGATCCGGGCGTCTGGCGAGCAACTCATAAGAGAGTGTCGCCGGAATGCCGGTCTGGACTTGCGGTAATGCCACCGGTCTGATCTCCGGCATATCGCTGGCTCCCGCGCCAATCAATGCACGCAGAGATTCTCGCGTTTCGGTGATTTGCCCTTTGACGGCAACAATTTGT > CP009273/4289568‑4290107 | gtatgcaggccagctatcagatgctcgatctgttagaacaaactcacgatgtgattgattacgcggtgaaagcgcaccagagtaaagtggcgcacggtctggaagcgcaagtgcctttccacggcgcgcgggcacagattctggcggtcgataaacaaattgttgccgtcaaagggcaaatcaccgaaacgcgagaatctctgcgtgcattgattggcgcgggagccagcgatatgccggagatcagaccggtgggattacatcaAGTCCAGAc < 2:137937‑M1/9‑1 (MQ=255) gccagctatcagatgctcgatctgttagaacaaactcacgatgtgattgattacgcggtgaaagcgcaccagagtaaagtggcgcacggtctggaagcgcaagtgcctttccacggcgcgcgggcacagattctggcggtcgataaacaaattgttgccgtcaaagggcaaatcacagaaacgcgaccatacctgcatccattcattggcgcgggaggcagcgatatgccggagaacagacaggtggaataaccgcaagtcaagactggacttac < 2:118686‑M1/18‑10 (MQ=255) gcgcGTGGCTTCCACGCGTTCAGCCTGCATTTCTCGCTCGTCGTTGAGCGTTTGCAGACGCGTGCCGTTGACGGCAACGTCACGCACCGCGTTCAGTACTGACTGGTTGTAACGTTCAATCATCATGTTGCTGGCGTCGCGCGTGCCTTCGAGATTGGCATTAAAACGTCCACCGTCACACAGCGGCAATTTCAGACCCGGGCTGAAGTTGAACTGGCGACTGGATTTTTTGCATAAGTTATGACGATGGATGGAGTCAAGAACGatgaaacaa > 1:724099/1‑266 (MQ=255) ctcgatctgttagaacaaactcacgatgtgattgattacgcggtgaaagcgcaccagagtaaagtggcgcacggtctagaagcgcaagtgcctttccacggcgcgcgggcacagattctggcggtcgataaacaaattgttgccgtcaaagggcaaatcaccgaaacgcgagaatctctgcgttcattgattggcgcgggagccagcgatatgccggagatcagaccggtggcattaccgcaAGTCCAGACCGAAAAACGCTTTGATATCAAAGc < 1:248101‑M1/33‑1 (MQ=255) cgcgTTCAGCCTGCATTTCTCGCTCGTCGTTGAGCGTTTGCAGACGCGTGCCGTTGACGGCAACGTCACGCACCGCGTTCAGTACTGACTGGTTGTAACGTTCAATCATCATGTTGCTGGCGGCGCGCGTGCCTTCGAGATTGGCATTCAACCGTCCACCGTCAAACAGCGGCACTTTCAGACCCGGGATGAAGTTGACATGGCGACGGGGTTGTTTGAATAAGGTATGCAAATGGATGGAGTCCAGACGGGAAACCGATTTTATAGCaacgag > 2:123355/1‑270 (MQ=255) gTTCAGCCTGCATTTCTCGCTCGTCGTTGAGCGTTTGCAGACGCGTGCCGTTGACGGCAACGTCACGCACCGCGTTCAGTACTGACTGGTTGTAACGTTCAATCATCATGTTGCTGGCGGCGAGCGTGTCTTCGAGATTGGCATTCAACCGTCCACCGTCAAACAGCGGCAATTTCAGACCCGGGATGAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGGTATGCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGCACgg > 1:240952/1‑274 (MQ=255) tcgtTGAGCGTTTGCAGACGCGTGCCGTTGACGGCAACGTCACGCACCGCGTTCAGTACTGACTGGTTGTAACGTTCAATCATCATGTTGCTGGCGGCGCGCGTGCCTTCGAGATTGGCATTCAACCGTCCACCGTCAAACAGCGGCAATTTCAGACCCGGGATGAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGGTATGCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCCGCGCGGAATc > 1:109230/1‑275 (MQ=255) tcgtTGAGCGTTTGCAGACGCGTGCCGTTGACGGCAACGTCACGCACCGCGTTCAGTACTGACTGGTTGTAACGTTAAATCATCATGTTGCTGGCGGCGCGCGTGCCTTCGAGATTGGCATTCAACCGTCCACCGTCCAACCGCCGCAATTTCAGACCCGGGATTAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGGTATGCCGATGGCTGGAGTCCAGACCGAAAAACGCTTTGATATCAAATCTCGGATCAAACAACACACGCGCGGAATc > 1:33157/1‑275 (MQ=255) cGTTTGCAGACGCGTTCCGTTGACGGCAACGTCACGCACCGCGTTCAGTACTGACTGGTTGTAACGTTCAATCATCATGTTGCTGGCGGCGCGCGTGCCTTCGAGATTGGCATTCAACCGTCCACCGTCAAACAGCGGCAATTTCAGACCCGGGATGAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGGTATGCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCCGCGCGGAATCCACCTGAt < 1:221021/275‑1 (MQ=255) gTTTGCAGACGCGTGCCGTTGACGGCAACGTCACGCACCGCGTTCAGTACTGACTGGTTGTAACGTTCAATCATCATGTTGCTGGCGGCGCGCGTGCCTTCGAGATTGGCATTCAACCGTCCACCGTCAAACAGCGGCAATTTCAGACCCGGGATGAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGGTATGCAGATGGATGGAGTACCGACCGAAAAACGCTTTGATAGCAAAGCTCGGATAGAAAAACGCCCGCGCGGaccccaacggag > 2:195464/1‑263 (MQ=255) gcggaccatgaccGGCAACGGCACCCACTCCTGTCCGTTCTGACTGGTTGTAACGTTCAATCATCATGTTGCTGGCGGCGCGCGGGCCTTCGAGATTGGCAGTCAACCGTCCACCGTCAAACAGCGGCAATTTCAGACCCGGGATGAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGGTATGTAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCCGCGCGGAATCCACCTGATCTAATGACGc < 2:703005/262‑1 (MQ=255) gTGCCGTTGAGGGCAACGTCACGCACCGCGTTCAGTACTGACTGGTTGTAACGTTCAATCATCATGTTGCTGGCGGCGCGCGTGCCTTCGAGATTGGCATTCAACCGTCCACCGTCAAACAGCGGCAATTTCAGACCCGGTATGAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGGTATGTAGATGGATGGAGCCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCCGCGCGGAATCCACCTGATCTAATGACACCt > 1:703014/1‑274 (MQ=255) tGCCGTTGACGGCAACGTCACGCACCGCGTTCAGTACTGACTGGTTGTAACGTTCAATCATCATGTTGCTGGCGGCGCGCGTGCCTTCGAGATTGGCATTCAACCGTCCACCGTCAAACAGCGGCATTTTCAGACCCGGGACGAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGGGATGCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATCTCAAAGCTCGGATAGAACAACGCCCGCGACGAATCCACCTGATCTAATGACACCTGa > 1:395306/1‑275 (MQ=255) aaCGTCACGCACCGCGTTCAGTACTGACTGGTTGTAACGTTCAATCATCATGTTGCTGGCGGCGCGCGTGCCTTCGAGACTGGCATTCAACCGTCCACCGTCAAACAGCGGCAATTTCAGACCCGGGATGAAGTAGAACTGGCGACTGGTTTTTTTGAATAAGGTATGCAGATGTATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCCGCGCGGAATCCACCTGATCTAATGACGCCTGAACATACCAGCGCa < 1:676608/275‑1 (MQ=255) tgacACGCACCGCGTTCAGTACTGAGTGGGTGTAACGTTCAACCATCAGGATGCTGGCGGCGCGCGTTCCTGCCAGATTTGCATGCAACCGTCCACCGTCGAACAGCTGCAATTTCAGACCCGGGATGAAGTTGAACAGGCGAATGGTTGTTTTGAATAAGGTATGCAGATGGATGGAGACAAGACCGAAAAACGCATTAATATCAAAGCTCGGATAGAACAACGCCCACACGGAACCAACCGGATCGAAAGACCCCTTAACAAACCAccggggg > 2:601245/4‑271 (MQ=255) gTCACGCACCGCGTTCAGTTCTTACTGTTTGTAACGTTTAATCATCCTGTTGCTGGCGGCGCGCGTGCCTTCTAGATTTGCATTCAACCGTCCACCGTCAAACAGCGGCAATTTCAGACCCGGGATGAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGGTATGCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCCGCGCGGAATCCACCTGATCTAATGACGCCTGTACATACCAGCGCATg < 2:240947/274‑1 (MQ=255) cGCACCGCGTTCAGTACTGACTGGTTGTAACGTTCAATCATCATGTTGCTGGCGGCGCGCGTGCCTTCGAGATTGGCATTCAACCGTCCACCGTCAAACAGCGGCAATTTCAGACCCGGGATGAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGGTATGCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCCGCGCGGAATCCACCTGATCTAATGACGCCTGAACATACCAACGCATGGCtt > 1:54085/1‑274 (MQ=255) tagaagaccaagtgcctttccacggcgcgcgggcccagattctggcggtcgataaacaaattggtgccgtcaaagggcaaatcaccgaaacgcgagaatctctgcgttcattgattggggcgggagccagcgatatgccggagatcagaccggtggcattaccgcaAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCCGCGCGGAATCCACCTGATCTAATGACGCCTGAACATACCAGCGCATGGCTTGCAGATc > 2:248096‑M1/167‑275 (MQ=255) cgTTCAGTACTGACTGGTTGTAACGTTCAATCATCATGTTGCTGGCGGCGCGCGTGCCTTCGAGATTGGCATTCAACCGTCCACCGTCAAACAGCGGCAATTTCAGACCCGGGCTGAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGGTATGCAGATGGATGGAGTCCAGACCGAAAAACTCTTTGATATCAAATCTCGGATAGAACAACGCCCGCGCGGAATCCACCTGATCAAATGCCGACTGAACCTACCAGCCCAGTGCTTTCAGATc > 2:713690/1‑274 (MQ=255) tgactgGTTGTAACGGTCAATCATCATGCGGCTGGCGGCGCGCGTGCCTTCGAGATTGGCATTCAACCGTCCACCGTCAAACAGCGGCAATTTCAGACCCGGGATGAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGGTATGCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATcn > 1:503487/1‑183 (MQ=255) actgGTTGTAACGTTCAATCATCATGTTGCTGGCGGCGCGCGTGCCTTCGAGATTGGCATTCAACCGTCCACCGTCAAACAGCGGCAATTTCAGACCCGGGATGAAGTTGAATTGGCGACTGGTTTTTTTGAATAAGGTATGCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCCGCGCGGAATCCACCTGATCTAATGACGCCTGAACATACCAGCGCATGGCTTTCAGATcctggcgcctggcg > 1:316910/1‑275 (MQ=255) actgGTTGTAACGTTCAATCATCATGTTGCTGGCGGCGCGCGTGCCTTCGAGATTGGCATTCAACCGTCCACCGTCAAACAGCGGCAATTTCAGACCCGGGATGAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGGTATGCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCCGCGCGGAATCCACCTGATCTAATGACGCCTGAACACACCAGCGAACGGCTGGCAGATCCGGGCGTCTGGCg > 2:314337/1‑275 (MQ=255) actgGTTGTAACGTTCAATCATCATGTTGCTGGCGGCGCGCGTGCCTTCGAGATTGGCATTCAACCGTCCACCGTCAAACAGCGGCAATTTCAGACCCGGGATGAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGGTATGCAGATGGATGGAGTCCAGACAGAAAAACGCTTTGATATCAAAGCACGGATAGAACAACGCCCGCGCGGAATCAACCTGATCTAATGACGCCTGAACATACCCGCGCATGGCTTGCAGCTCCGGGAGCCTGGCg > 1:254343/1‑275 (MQ=255) actgGTTGTAACGTTCAATCATCATGATGCTGGCTGCGCGCGTGCCTTCGAGATTGGCATTCAACCGTCCACCGTCAAACAGCGGCAATTTCAGACCCGGGATGAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGGTATGCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAANGCTCGGATNGAACAACGCCCGCGCGGAATCCACCTGATCTAATGACGCCTGAACATACCAGCGCATGGCTTGCAGATCCGGGCGTCAGGCg > 1:470657/1‑275 (MQ=255) gtttgaccGTTAAATCATCATGTTGAGGGCGGCGCGCGTGCCTGCGAGATTGGCATTCAACCGTCCACCGGCAAACAGCGGCAATTTCAGACCCGGGATGAAGTTGAATTGGCGACTGGTTTTTTTGAATAAGGTATGCAGAGGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCCGCGCGGAATCCACCTGATCTAATGACGCCTGAACATACCAGCGCATGGCTTGCAGATCCGGGCGTCTGGCGAGCa < 2:316904/268‑1 (MQ=255) gTTGTAACGTTCAATCATCATGGTGCTGGCGGCGCGCGTGCCTTCGAGATTGGCATTCAACCGTCCACCGTCAAACAGCGGCAATTTCAGACCCGGGATGAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGGTATGCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCCGCGCGGAATCCACCTGATCTAATGACGCCTGAACATACCAGCGCATGGCTTGCAGATCCGGGCGTCTGGCGAGCa < 1:314343/275‑1 (MQ=255) ttGTAACGTTCAATCATCATGTTGCTGGCGGCGCGCGTGCCTTCGAGATTGGCATTCAACCGTCCACCGTCAAACAGCGGCAATTTCAGANCCGGGATGAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGGTATGCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCCGCGCGGAATCCACCTGATCTAATGACGCCTCAACATACCAGCGCATGGCTTGCAGATCCGGGCGTCTGGCGAGCa < 1:521163/274‑1 (MQ=255) ttGTAACGTTCAATCATCATGTTACTGGCGGCGCGCGTGCCTTCGAGATTGGCATTCAACCGTCCACCGTCAAACAGCGGCAATTTCAGACCCGGGATGAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGGTATGCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATCa > 1:496096/1‑177 (MQ=255) gTATCGTTCANCCATCAGGTTGCTGGCGGCGCGCGGGCCTTCGAGATTGGCATTCAACCGTCCACCGTCAAACAGCGGCAATTTCAGACCCGGGATGAAGTTGAACTTGCGACTGGTTTTTTTGAAGAAGGTATGCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCCGCGCGGAATCCACCTGATCTAATGACGCCTGAACATACCAGCGCATGGCTTGCAGATCCGGGCGTCTGGCGAGCAAc < 2:54085/274‑1 (MQ=255) gTAACGTTCAATCATGAGGTTGCTGGCGGCGCGCTTGCCTTCGCGATTGGCATTCAACCGTCCACCGTCAAACAGCGGCAATTTCAGACCAGGGATGAAGTTGAACTGGCGACTGGTTTTTTGGAATAAGGGATGCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGCACAACGCCCGCGCGGAATCCACCTGATCTAATGACGCCTGAACATACCAGCGCATGGCTTGCAGATCCGGGCGTCTGGCGAGCAAc < 2:170750/274‑1 (MQ=255) aaCGTTCAATCATCATGTTGCTGGCGGCGCGCGTGCCTTCGAGATTGGCATTCAACCGTCCACCGTCAAACAGCGGCAATTTCAGACCCGGGATGAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGGTATGCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGc < 2:496089/177‑1 (MQ=255) aCGTTCAATCATCATGTTGCTGGCGGCGCGCGTGCCTTCGAGATTGGCATTCAACCGTCCACCGTCAAACAGCGGCAATTTCAGACCCGGGATGAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGGTATGCAGATGGATGGAGTCCAGACCGa > 2:310502/1‑155 (MQ=255) aCGTTCAATCATCATGTTGCTGGCGGCGCGCGTGCCTTCGAGATTGGCATTCAACCGTCCACCGTCAAACAGCGGCAACTTCAGACCCGGGATGAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGGTATGCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCCGCGCGGAATCCACCTGATCTAATGACGCCTGAACATACCAGCGCATGGCTTGCAGATCCGGGCGTCTGGCGAGCAACTCa < 1:713700/274‑1 (MQ=255) tCAATCATCATGTTGCTGGCGGCGCGCGTGCCTTCGAGATTGGCATTCAACCGTCCACCGTCAAACAGCGGCAATTTCAGACCCGGGATGAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGGTATGCAGATGGATGGAGTCCAGACCGaaaaa < 1:310508/155‑1 (MQ=255) cAATCAGCAGGTTGCTGGCGGCGCGCGGGCCTTTGTGAGGTGCATGCAACCGTCCACCGTACAACCGCGGCAATGTCAGACCCGGGATGAATGTTAACTGGCGACTGGTTTTTTTGAATAAGGTATGCAGATGGATGGAGTCCATACCGAAAAACGCTTTGATATCAAATCTCGGATAGCACAACGCCCGCGCGGAATCCACCTGATCTAATGACGCCTGAACATACCAGCTCATGGCTTGCAGATCCGGGCGTCTGGCGAGCAACTCATAaga < 2:254338/274‑1 (MQ=255) acagattctggcggtcgataaacaaattgttgccggcaaagggcaaatcaccgaaacgcgagaatctctgcgtgcattgattggcgcgggagccagccatatgccggagatcagaccggtggcattaccgcaAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCCGCGCGGAATCCACCTGATCTAATGACGCCTGAACATACCAGCGCATGGCTTGCAGATCCGGGCGTCTGGCGAGCAACTCATAAGAGAGTGTc > 1:365545‑M1/133‑275 (MQ=255) gcgTGCCTTCGAGATTGGCATTCAACCGTCCACCGTCAAACAGCGGCAATTTCAGACCCGGGATGAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGGTATGCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCCGCGCGGAAt > 2:691137/1‑174 (MQ=255) gCCTTCGAGATTGGCATTCAACCGTCCACCGTCAAACAGCGGCAATTTCAGACCCGGGATGAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGGTATGCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCCGCGCGGAATCCAc < 1:691146/174‑1 (MQ=255) tCCACCGTCAAACAGCGGCAATTTCAGACCCGGGATGAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGGTATGCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGcc > 1:185475/1‑136 (MQ=255) tCCACCGTCAAACAGCGGCAATTTCAGACCCGGGATGAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGCTATGCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGcc > 2:246218/1‑136 (MQ=255) ccGTCAAACAGCGGCAATTTCAGACCCGGGATGAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGGTATGCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCcgcg < 2:185472/136‑1 (MQ=255) ccGTCAAACAGCGGCAATTTCAGACCCGGGATGAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGCTATGCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCcgcg < 1:246223/136‑1 (MQ=255) aaCAGCGGCAATTTCAGACCCGGGATGAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGGTATGCAGATGGATGGAGTCCAGAc > 1:182623/1‑85 (MQ=255) aaCAGCGGCAATTTCAGACCCGGGATGAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGGTATGCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCCGCGCGGAATCCACCTGATCTAATGACGCCTGAACATACCAGCGCATGGCTTGCAGATCCGGGCGTCTGGCGAGCAACTCATAAGAGAGTGTCGCCGGAATGCCGGTCTGGACTTGCGGTAATGCCACCGGTCTGATCTCCGGCatat > 1:274601/1‑274 (MQ=255) gCGGCAATTTCAGACCCGGGATGAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGGTATGCAGATGGATGGAGTCCAGACCGaa < 2:182620/85‑1 (MQ=255) cGGCAATTTCAGACCCGGGATGGCATTGAACTGGCGACTGGTTTTTTTGAATAAGGTATGCAGCGGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGTATAGAACAACGACCTCACGAAATCCACCTGATCTACGGACGCCTGAACATACCAGAGCATGGCGGGCATGTCCGGGAGTCACGCCAGCAACTGCTAAGAAAGTATCTCCAGAACGTCGCGGTGGACGTGGGGGCATGCAACCGGACTCAGCTcctgacaagacggg > 2:119800/1‑262 (MQ=255) cGGCAATTTCAGACCCGGGATGAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGGTATGCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCCGCGCGGAATCCACCTGATCTAATGACGCCTGAACATACCAGCGCATGGCTTGCAGGTCCGGGCGTCTGGCGAGCAACTCATAAGAGAGTGTTGCCGGAAGGCCGGTCTGGACTTGCGGTAATGCCACCGGTCTGATCTCCGGCAAATCGCAgg > 1:396026/1‑275 (MQ=255) gCAATTTCAGACCCGGGATGAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGGTATGCAGATGGATGGAGTCCAGAcc > 2:700995/1‑79 (MQ=255) tttCAGACCCGGGATGAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGGTATGCAGATGGATGGAGTCCAGACCGaaa < 1:701004/79‑1 (MQ=255) taaGACCCGGGATGAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGGTATGCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGGACAACGCCCGCGCGGAATCCACCTGATCTAATGACGCCTGAACATACCAGCGCATGGCTTGCAGATCCGGGCGTCTGGCGAGCAACTCATAAGAGAGTGTCGCCGGAATGCCGGTCTGGACTTGCGGTAATGCCACCGGTCTGATCTCCGGCATATCGCTGGCTCCcgcg < 1:443346/273‑1 (MQ=255) attgattggcgcgggagccagcgatatgccggagatcagaccggtggcattaccgcaAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCCGCGCGGAATCCACCTGATCTAATGACGCCTGAACATACCAGCGCATGGCTTGCAGATCCGGGCGTCTGGCGAGCAACTCATAAGAGAgtg < 2:156640‑M1/141‑1 (MQ=255) ggATGAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGGTATGCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCcgcgc > 1:266055/1‑109 (MQ=255) ggATGAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGGTATGCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCCGCGCGGAATCCACCTGATCTAATg > 1:678804/1‑129 (MQ=255) attggcgcgggagccagcgatatgccggagatcagaccggtggcattaccgcaAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCCGCGCGGAATCCACCTGATCTAATGACGCCTGAACATACCAGCGCATGGCTTGCAGATCCGGGCGTCTGGCGAGCAACTCATAAGAGAGTGTCGc > 1:156643‑M1/54‑198 (MQ=255) gAAGTTGAACTGGCGACTGGTTTTTTTGGATAAGGTATGCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCCGCGCGGAATCCACCTGATCTAATGACGc < 2:678795/129‑1 (MQ=255) gAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGGTATGCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCCGCGCGGaa < 2:266050/109‑1 (MQ=255) gAACTGGCGACTGGTTTTTTTGAATAAGGTATGCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCCGCGCGGAATCCACCTGATCTAATGACGCCTGAACATACCAGCGCATGGCTTGCAGATCCGGGCGTCTGGCGAGCAACTCATAAGAGAGTGTCGCCGGAATGCCGGTCTGGACTTGCGGTAATGCCACCGGTCTNTGCTCAGGCATATCGCGGTCTCTCTCTCCACCCAATCCActccca > 2:451035/1‑269 (MQ=255) gCGACTGGTTTTTTTGAATAAGGTATGCAGATGGATGGGGTCCAGACCGAAAAACGCTTTGATATCa > 2:154849/1‑67 (MQ=255) cTGGTTTTTTTGAATAAGGTATGCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGc < 1:154852/67‑1 (MQ=255) gTTTTTTTGAATAAGGTATGCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCCGCGCGGAATCCACCTGATCTAATGACGCCTGaa > 1:96712/1‑115 (MQ=255) ttttGAATAAGGTATGCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCCGCGCGGAATCCACCTGATCTAATGACGCCTGAACATa < 2:96711/115‑1 (MQ=255) tAAGGTATGCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGCt > 1:118186/1‑54 (MQ=255) gTATGCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGa < 2:118185/54‑1 (MQ=255) gCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCCGCGCGGAATCCACCTGATCTAATGACGcc > 2:701922/1‑92 (MQ=255) gCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCCGCGCGGAATCCACCTGATCTAATGACGCCTGAACATACCAGCGCATGGCTTGCAGATCCGGGCGTCTGGCGAGCAACTCATAAGAGAGTGTCGCCGGAATGCCGGTCTGGACTTGCGGTAATGCCACCGGTCTGATCTCCGGCATATCGCTGGCTcc > 2:529884/1‑220 (MQ=255) aGATGGCTGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCCGCGCGGAATCCACCTGATCTAATGACGCCTGAACATACCAGCGGATGGCTTGCAGATCCGGGCGTCTGGCGAGCAACTCATAAGAGAGTGTCGCCGGAATGCCGGTCTGGACTTGCGGTAATGCCACCGGTCTGATCTCCGGCATATCGCTGGCTCCCGCGCCAATCAATGCACGCAGAGATTCTCGCGTTTCGGTGATTTGCCCTTTGACGGc < 1:451042/275‑1 (MQ=255) atggatggAGTCCAGACCGAAAAACGCTTTGATATCa > 2:611927/1‑37 (MQ=255) atggatggAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCCGCGCGGAATCCACCTGATCTAATGACGCCTGaa < 1:701931/92‑1 (MQ=255) atggatggAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCCGCGCGGAATCCACCTGATCTAATGACGCCTGAACATACCAGCGCATGGCTTGCAGATCCGGGCGTCTGGCGAGCAACTCATAAGAGAGTGTCGCCGGAATGCCGGTCTGGACTTGCGGTAATGCCACCGGTCTGATCTCCGGCATATCGCTGGCTCCcgcg < 1:529892/220‑1 (MQ=255) ggatggaGTCCAGACCGAAAAACGCTTTGATATCAAAGCt > 2:272681/1‑40 (MQ=255) ggatggaGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCCGCGCGGAATCCACCTGATCTAATGAc > 2:668922/1‑83 (MQ=255) atggaGTCCAGACCGAAAAACGCTTTGATATCAAAGc < 1:611936/37‑1 (MQ=255) ggaGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGa < 1:272686/40‑1 (MQ=255) ggaGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCCGCGCGGAATCCACCTGATCTAATGACGCCt < 1:668931/83‑1 (MQ=255) AGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCCGCGCGGAATCCACCTGATCTAATGACGCCTGAACATACCAGCGCATGGCTTGCAGATCCGGGCGTCTGGCGAGCAACTCATAAGAGAGTGTCGCCGGAATGCCGGTCTGGACTTGCGGTAATGCCACCGGTCTGATCTCCGGCATATCGCTGGCTCCCCCGCCAATCAATGCACGCAAAGATTCTCGCGTTTCGGGGATTTGCCCTttgccggcaacccttttt < 2:714809‑M1/275‑8 (MQ=255) | CGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCAGCCTGCATTTCTCGCTCGTCGTTGAGCGTTTGCAGACGCGTGCCGTTGACGGCAACGTCACGCACCGCGTTCAGTACTGACTGGTTGTAACGTTCAATCATCATGTTGCTGGCGGCGCGCGTGCCTTCGAGATTGGCATTCAACCGTCCACCGTCAAACAGCGGCAATTTCAGACCCGGGATGAAGTTGAACTGGCGACTGGTTTTTTTGAATAAGGTATGCAGATGGATGGAGTCCAGACCGAAAAACGCTTTGATATCAAAGCTCGGATAGAACAACGCCCGCGCGGAATCCACCTGATCTAATGACGCCTGAACATACCAGCGCATGGCTTGCAGATCCGGGCGTCTGGCGAGCAACTCATAAGAGAGTGTCGCCGGAATGCCGGTCTGGACTTGCGGTAATGCCACCGGTCTGATCTCCGGCATATCGCTGGCTCCCGCGCCAATCAATGCACGCAGAGATTCTCGCGTTTCGGTGATTTGCCCTTTGACGGCAACAATTTGT > CP009273/4289568‑4290107 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |