New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	4324095 =	75 (1.950)	6 (0.160)	6/298	NT	8.3%	coding (1313/1644 nt)	eptA	lipid A phosphoethanolamine transferase
	?	CP009273	4325518 =	61 (1.670)					coding (1331/1338 nt)	adiC	arginine:agmatine antiporter

ATCCCAATAGCGTGGAGAATAAATTGTCTTGTGAATAGTGTTGCGTTTGCGCCTGTTTTTGCAGGCAGTTCTGGTCAACCTGATACCGTTTTTGATAATCCTCCGACAGCCACAGCAGCATCGGCACCTGTTTTTGGCTATCCGGGGCGATGGCATAAGGCAGACCGTGCAGATAGATGCCATTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGTAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGAT  >  CP009273/4323838‑4324365                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                               aTCACAATAGTTTGGAGAATAAATTGGCTTGTGAATAGTGTTGCGTTTGCGCCTGTTTTTTCAGGCAGTTCTGGTCAACCTGATACCGTTTTTGATAATCCTCCGACAGCCACAGCAGCATCGGCACCTGTTTTTGGCTATCCGGGGCGATGGCATAAGGCAGACCGTGCAGATAGATGCCATTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATc                                                                                                                                                                                                                                                                <  2:622945/274‑1 (MQ=255)           cGTGGATAATATATTGTTTTGTGAATTGTTTTGCGTTTGCGCCTGTTTTTGCAGTCAGTTCTGGTCAACCTGATACCGTTTTTGATAATCCTCCGACAGCCACAGCAGCATCGGCACCTGTTTTTTGCTATCCGGGGCGATGGCATAAGGCAGACCGTGCAGATAGATGCCATTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGCTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGt                                                                                                                                                                                                                                                     <  1:93065/275‑1 (MQ=255)             tGGAGAATAAATTGTCTTGTGAATAGTGTTGCGTTTGCGCCTGTTTTTGCAGGCAGTTCTGGTCAACCTGATACCGTTTTTGATAATCCTCCGACAGCCACAGCAGCATCGGCACCTGTTTTTGGCTATCCGGGGCGATGGCATAAGGCAGACCGTGCAGATAGATGCCATTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTc                                                                                                                                                                                                                                                    >  1:412763/1‑274 (MQ=255)             tGGAGAATAAATTGTCTTGTGAATAGTGTTGCGTTTGCGCCTGTTTTTGCAGGCAGTTCTGGTCAACCTGATACCGTTTTTGATAATCCTCCGACAGCCACAGCAGCATCGGCACCTGTTTTTGGCTATCCGGGGCGATGGCATAAGGCAGACCGTGCAGATAGATGCCATTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGAAAATTAATCCTGATGTTCTTTCAGCAGATTAATCGCTTGATCACCATTATAGTCg                                                                                                                                                                                                                                                   >  2:8550/1‑275 (MQ=255)                ccattgttttacaccttttcgtcgttattgttgctcggacacggtcactttgttaaagcacgcccggcatatctggcagttactaccattgccttcctctactgcatctgggccgtggtggggtccggagcgaaagaggttatgtggtcatttgtccccctgatggtcatcaccgccatgtatgcgctgaattacaaccggctacataaaaacccgtatcccttagatgcaccaataagcaaAGATTAATCGCTTTATCAACAATATAGTCGACg                                                                                                                                                                                                                                                >  1:221982‑M1/243‑275 (MQ=255)                aggaTAAATTGTTTTGTGAATGTNTTTGCGTTTGCGCCTGTTTTTACAGGCAGTTCTGGTCAACCTGATACCGTTTTTGATAATCCTCCGACAGCCACAGCAGCATCGGCACCTGTTTTTGGCTATCCGGGGCGATGGCATAAGGCAGACCGTGCAGATAGATGCCATTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGAc                                                                                                                                                                                                                                                 <  2:412756/271‑1 (MQ=255)                    tAAATTGTCTTGTGAATAGTGTTGCGTTTGCGCCTGTTTTTGCAGGCAGTTCTGGTCAACCTGATACCGTTTTTGATAATCCTCCGACAGCCACAGCAGCATCGGCACCTGTTTTTGGCTATCCGGGGCGATGGCATAAGGCAGACCGTGCAGATAGATGCCATTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAAAATAGTCGACGTaaa                                                                                                                                                                                                                                            >  1:643/1‑275 (MQ=255)                            cTTGTGAATAGTGTTGCGTTTGCGCCTGTTTTTGCAGGCAGTTCTGGTCAACCTGATACCGTTTTTGATAATCCTCCGACAGCCACAGCAGCATCGGCACCTGTTTTTGGCTATCCGGGGCGATGGCATAAGGCAGACCGTGCAGATAGATGCCATTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCgt                                                                                                                                                                                                                                     <  1:8550/274‑1 (MQ=255)                              tgttAATAGTGTTGCGTTTGCGCCTGTTTTTGCAGGCAGTTCTGGTCAACCTGATACCGTTTTTGATAATCCTCCGACAGCCACAGCCGCATCGGCACCTGTTTTTGGCTATCCGGGGCGATGGCATAAGGCAGACCGTGCAGATAGATGCCATTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCgtgt                                                                                                                                                                                                                                   <  1:66518/274‑1 (MQ=255)                                 tgcggcgttactgctgctcggacacggtcactttggtaaagcacgcccggcatatctggcagttactaccattgccttcctctactgcatctgtgccgtggtggggtccggagcgaaagaggttatgtggtcatttgtcaccctgatggtcatcaccgccatgtatgcgctgaattacaaccggctacataaaaacccgtatcccttagatgcaccaataagcaaAGAt                                                                                                                                                                                                                                                                             <  1:183724‑M1/4‑1 (MQ=255)                                    tAGTGTTGCGTTTGCTCCTGTTTTTGCAGGCAGTTCTGGTCAAACTGATACCGTTTTTGATAATCCTCCGACAGCCACAGCAGCATCGGCACCTGTTTTTGGCTATCCGGGGCGATGGCATAAGGCAGACCGTGCAGATAGATGCCATTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCgtgt                                                                                                                                                                                                                                   <  1:18466/268‑1 (MQ=255)                                     gcgttactgctgctcggacacggtcactttggtaaagcacgcccggcatatctggcagttactaccattgccttcctctactgcatctgtgccgtggtggggtccgtagcgaaagaggttatgtggtcatttgtcaccctgatggtcatcaccgccatgtatgcgctgaattacaaccggctacataaaaacccgtatcccttagatgcaccaataagcaaAGATTAAt                                                                                                                                                                                                                                                                         >  2:183721‑M1/222‑229 (MQ=255)                                         ttGCGTTTGCGCCTGTTTTTGCAGGCAGTTCTGGTTAACCTGATACCGTTTTTGATAATCCTCCGACAGCCACAGCAGCATCGGCACCTGTTTTTGGCTATCCGGGGCGATGGCATAAGGCAGACCGAGAAGATAGATGAAATTTTCACCTAAAGATTCAACATGGTCAGAAAAATCAACAAGAGTGGAGGTAAATTTATACAGATGTTCTTTAAGCAGATTAATGACTTTGTGAAAAATATAGTCGAGAGAAACACGCGAGTTGTcttgcgtgg                                                                                                                                                                                                                       >  2:500337/1‑267 (MQ=255)                                          tGCGTTTGCGCCTGTTTTTGCAGGCAGTTCTGGTCAACCTGATACCGTTTTTGATAATCCTCCGACAGCCACAGCAGCATCGGCACCTGTTTTTGGCTATCCGGGGCGATGGCATAAGGCAGACCGTGCAGATAGATGCCATTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCGTTAGCAAGAATATAGTCGACGTAAACAAGCGTGTGGCCGTACgtgtg                                                                                                                                                                                                                      >  2:324043/1‑274 (MQ=255)                                              tttGCGCCTGCTTTTGCAGGCAGTTCTGGTCAACCTGATACTGTTTTTGATAATCCTCCGACAGCCACAGCAGCATCGGCACCTGTTTTTGGCTATCCGGGGCGATGGCATAAGGCAGACCGTGCAGATAGATGCCATTTACACCTACCGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATGCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCAcc                                                                                                                                                                                                                  >  1:707660/1‑275 (MQ=255)                                                 gcgcCTGTTTTTGCAGGCAGTTCTGGTCAACCTGATACCGTTTTTGATAATCCTCCGACAGCCACAGCAGCATCGGCACCTGTTTTTGGCTATCCGGGGCGATGGCATAAGGCAGACCGTGCAGATAGATGCCATTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCAGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCa                                                                                                                                                                                                                 >  1:373858/1‑273 (MQ=255)                                                 gcgcCTGTTTTTGCAGGCAGTTCTGGTCAACCTGATACCGTTTTTGATAATCCTCCGACAGCCACAGCAGCATCGGCACCTGTTTTTGGCTATCCGGGGCGATGGCATAAGGCAGACCGTGCAGAGAGATGCCATTTTCACCTAACGATTAACCGTGGTCAGAAAGATAAAACAGGCTGGTGGTAAATTTATCATGATGTTCTTTCAGCAGATAAATCg                                                                                                                                                                                                                                                                       >  2:327552/1‑219 (MQ=255)                                                   gtttttttttGAGGGAAGTTTTGGTAAAACTGATACCGTTTTGGATAAGACTCCGACAGCCACAGCAGCATCGGCACCTGTTTTTGGCTATCCGGGGCGATGGCATAAGGCAGACCGTGCAGATAGATGCCATTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTg                                                                                                                                                                                                             <  2:373852/270‑1 (MQ=255)                                                     cTGTTTTTGCAGGCAGTTCTGGTCAACCTGATACCGTTTTTGATAATCCTCCGACAGCCACAGCAGCATCGGCACCTGTTTTTGGCTATCCGGGGCGATGGCATAAGGCAGACCGTGCAGATAGATGCCATTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCttt                                                                                                                                                                                                                                                                   <  1:327558/219‑1 (MQ=255)                                                             gcaggcagTTCTGGTCAACCTGATACCGTTTTTGATAATCCTCCGACAGCCAAAGCAGCATCGGCACCTGTTTTTGGCTATCCGGGGCGATGGCATAAGGCAGACCGTGCAGATAGATGCCATTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTa                                                                                                                                                                                                   <  1:225447/275‑1 (MQ=255)                                                              caggcagTTCTGGTCAACCTGATACCGTTTTTGATAATCCTCCGACAGCCACAGCAGCATCGGCACCTGTTTTTGGCTATCCGGGGCGATGGCATAAGGCAGACCGTGCAGATAGATGCCATTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGAAGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTAc                                                                                                                                                                                                  <  1:688562/275‑1 (MQ=255)                                                                 cnagTTCTGGGCAACCTGATACCGTTTTTGAAACTCCGCCGACCGCCACTGCAGCCTCGGCACTGGGTGTTGGCGATCCGGGGCGATGGCATAAGGCAGACCGTGCAGATATATGCCATTGTCCCCTAACGATTCACCGTGGTCGGAAAGATAAACCAGGCGCGTGGTAGATTTATCCTGATGTTCTTTCAGCCGATTGATCGCTTTATCAACAATCTTGTCGACGTACACCTGCGTGTTGTCGTAAGTGTTCCCCAGTTGCTCTTGGGttc                                                                                                                                                                                                  <  2:643/270‑3 (MQ=255)                                                                  cagTTCTGGTCAACCTGATACCGTTTTTGATAATCCTCCGACAGCCACAGCAGCATCGGCACCTGTTTTTGGCTATCCGGGGCGATGGCATAAGGCAGACCGTGCAGATAGATGCCATTTTCACCTAACGATTCACCGTGGTCAGAAGGATAAACCAGNCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGt                                                                                                                                                                                              >  1:659753/1‑275 (MQ=255)                                                                     ttCTGGTCCACCTGATACCGTTTTTGATAATCCTCCGACAGCCACAGCAGCATCGGCACCTGTTTTTGGCTATCCGGGGCGATGGCATAAGGCAGACCGTGCAGATAGATGCCATTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCTg                                                                                                                                                                                           <  1:338163/275‑1 (MQ=255)                                                                                         tttttGATAATCCTCCGACAGCCACAGCAGCATCGGCACCTGTTTTTGGCTATCCGGGGCGATGGCATAAGGCAGACCGTGCAGATAGATGCCATTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCa                                                                                                                                                                                                                 >  1:199727/1‑233 (MQ=255)                                                                                             tGATAATCCTCCGACAGCCACAGCAGCATCGGCACCTGTTTTTGGCTATCCGGGGCGATGGCATAAGGCAGACCGTGCAGATAGATGCCATTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTg                                                                                                                                                                                                             <  2:199724/233‑1 (MQ=255)                                                                                                                        aTCGGCACCTGTTTTTGGCTATCCGGGGCGATGGCATAAGGCAGACCGTGCAGATAGATGCCATTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATa                                                                                                                                        >  1:196185/1‑275 (MQ=255)                                                                                                                         tCGGCACCTGTTTTTGGCTATCCGGGGCGATGGCATAAGGCAGACCGTGCAGATAGATGCCATTTTCACCTAACGATTCACCGTGGTCAGANAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGAGGTACATTTCCTTAACTGAGGCGGATAg                                                                                                                                       <  1:500344/275‑1 (MQ=255)                                                                                                                          agcaaacTGTTGTTTGATATCCGGGANGATGGCATAAGGTAGACCGTGCTGATAGATTCCATTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAAGCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCTGGATTTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGc                                                                                                                                      <  2:475547/269‑1 (MQ=255)                                                                                                                                                       tGGCATAAGGCAGACCGTGCAGATAGATGCCATTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATc                                                                                                                                                                                                                                                                >  1:330935/1‑124 (MQ=255)                                                                                                                                                           aTAAGGCAGACCGTGCAGATAGATGCCATTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATcaaca                                                                                                                                                                                                                                                            <  2:330929/124‑1 (MQ=255)                                                                                                                                                                   tcatttgtcaccctgatggtcatcaccgccatgtatgcgctgaattacaaccggctacataaaaacccgtatcccttagatgcaccaataagcaaAGATTAATCGCTTTATCAACAATATCGTCGCCGTAAACCAGCGTGTTGTCGTCAGTGTTCACCAGTtga                                                                                                                                                                                                            <  2:67658‑M1/69‑2 (MQ=255)                                                                                                                                                                   gACCGTGCAGATAGCTGCCATTTTCTCCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTGCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTTGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGTaa                                                                                              <  1:379257/274‑1 (MQ=255)                                                                                                                                                                   gACCGTGCAGATAGATGCCATTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGNTCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTACGGAACTGAGGCGGCTAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGgggtgt                                                                                                >  1:615163/1‑272 (MQ=255)                                                                                                                                                                   gACCGTGCAGATAGATGCCATTTTCACCTAACGATTCACCGTGGACAGAAAGATAAACCAGGCTGGTGTTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGATGTCACAGGTTGTGGTAAATTGCCTGAACTGAGGCGGATAGCGGTTGTAATAGATCGGACAGTGGCGTCCGATGGTGGGGAAg                                                                                             >  1:149584/1‑275 (MQ=255)                                                                                                                                                                    aCCGTGCAGATAGATGCCATTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAata                                                                                                                                                                                                                                                         >  1:174753/1‑118 (MQ=255)                                                                                                                                                                    aCCGTGCAGATAGATGCCATTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAg                                                                                                                                                                                                                                        >  2:95608/1‑135 (MQ=255)                                                                                                                                                                    aCCGTGCAGATAGATGCCATTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGAGAGCGGTTGTAATAGGGCGGACCGTGGCTGCGGAGGGGGTGGAAg                                                                                             >  1:426756/1‑274 (MQ=255)                                                                                                                                                                       ttgtcaccctgatggtcatcaccgccatgtatgcgctgaattacaaccggctacataaaaacccgtatcccttatatgcaccaataagcaaATATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCtt                                                                                                                                                                                                        >  1:67659‑M1/92‑164 (MQ=255)                                                                                                                                                                       gTGCAGATAGATGCCATTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGTAAGACaa                                                                                         >  1:237926/1‑275 (MQ=255)                                                                                                                                                                        tGCAGATAGATGCCATTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTGAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACNTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGTAAGACAAt                                                                                        <  1:605259/275‑1 (MQ=255)                                                                                                                                                                        tGCAGATAGATGCCATTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGAtt                                                                                                                                                                                                                                                                            >  1:695339/1‑95 (MQ=255)                                                                                                                                                                        tGCAGATAGATGCCATTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCtt                                                                                                                                                                                                                                                                    >  1:145526/1‑103 (MQ=255)                                                                                                                                                                        tGCAGATAGATGCCATTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGt                                                                                                                                                                                                                                                     <  2:174750/118‑1 (MQ=255)                                                                                                                                                                        tGCAGATAGATGCCATTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCgtg                                                                                                                                                                                                                                    <  1:95609/135‑1 (MQ=255)                                                                                                                                                                        tGCAGATAGATGCCATTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGTAAGACAAt                                                                                        >  1:317219/1‑275 (MQ=255)                                                                                                                                                                          cAGATAGATGCCATTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGAtt                                                                                                                                                                                                                                                                            >  1:137434/1‑93 (MQ=255)                                                                                                                                                                            gatagatGCCATTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATc                                                                                                                                                                                                                                                                        <  2:695330/95‑1 (MQ=255)                                                                                                                                                                            gatagatGCCATTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATc                                                                                                                                                                                                                                                                <  2:145525/103‑1 (MQ=255)                                                                                                                                                                              tagatGCCATTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATc                                                                                                                                                                                                                                                                        <  2:137433/93‑1 (MQ=255)                                                                                                                                                                                gatGCCATTGTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGTAAGACAATCACGCCa                                                                                 <  2:237921/274‑1 (MQ=255)                                                                                                                                                                                  tGCCATGTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCttt                                                                                                                                                                                                       >  2:412917/1‑154 (MQ=255)                                                                                                                                                                                      aTTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTa                                                                                                                                                                                                   <  1:412924/154‑1 (MQ=255)                                                                                                                                                                                       ttttCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGTAAGACAATCACGCCATCACCTTg                                                                         <  1:324049/275‑1 (MQ=255)                                                                                                                                                                                            aCCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGTAAGACAATCACGCCATCACCTTGCAGGt                                                                    <  1:130118/275‑1 (MQ=255)                                                                                                                                                                                                   gATTCACCGTGGTCAGAAAGATAAACCATGCTTGTGGGAAATTTATCCTGTTGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGTAAGACAATCACGCCATCACCTTGCAGGTTATTg                                                               <  2:659744/273‑1 (MQ=255)                                                                                                                                                                                                      tctccGTGGTCTGAAAGATATACCAGTCTTGTGGTAAATTGATTCTGATTTTCTTTCATCAGAGTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCTGTATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCTGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGTAAGACAATCTCGCCATCACCTTGCAGGTTATTGATGTa                                                          <  1:123180/272‑1 (MQ=255)                                                                                                                                                                                                      tCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTa                                                                                                                                                                                                                                                                  >  1:23023/1‑75 (MQ=255)                                                                                                                                                                                                          cGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATcaa                                                                                                                                                                                                                                                              <  2:23023/75‑1 (MQ=255)                                                                                                                                                                                                             ggTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCTGTATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTTAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTTGCTGCCGATGGTGTGTAAAACAATCACGCCATCACCTTGCAGTCTATTGATGTACTCTTc                                                    >  1:142206/1‑274 (MQ=255)                                                                                                                                                                                                             ggTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCg                                                                                                                  >  2:650658/1‑212 (MQ=255)                                                                                                                                                                                                              attacaaccggctacataaaaacccgtatcccttagatgcaccaataagcaaAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGGCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGTAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCaa                                                  >  1:202822‑M1/53‑275 (MQ=255)                                                                                                                                                                                                                 aGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATTAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGc                                                                                                              <  1:650667/212‑1 (MQ=255)                                                                                                                                                                                                                       ggctacataaaaacccgtatcccttagatgcaccaataagcaaAGATTAATCGCTTTATCAACAATATAGTCg                                                                                                                                                                                                                                                   <  2:32931‑M1/30‑1 (MQ=255)                                                                                                                                                                                                                        tAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGc                                                                                                                                                                                                            >  2:120377/1‑111 (MQ=255)                                                                                                                                                                                                                        tAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGc                                                                                                                                             >  2:333023/1‑174 (MQ=255)                                                                                                                                                                                                                           acataaaaacccgtatcccttagatgcaccaataagcaaAGATTAATCGCTTTATCAACAATATAGTCGACGt                                                                                                                                                                                                                                               >  1:32931‑M1/40‑73 (MQ=255)                                                                                                                                                                                                                            ccATGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGAt                                                                                                                                         <  1:333029/174‑1 (MQ=255)                                                                                                                                                                                                                            ccAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCtt                                                                                                                                                                                                        <  1:120378/111‑1 (MQ=255)                                                                                                                                                                                                                                 cTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAata                                                                                                                                                                                                                                                         >  2:27372/1‑57 (MQ=255)                                                                                                                                                                                                                                 cTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCttt                                                                                                                                                                                                       >  2:460191/1‑107 (MQ=255)                                                                                                                                                                                                                                     tggtAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGt                                                                                                                                                                                                                                                     <  1:27372/57‑1 (MQ=255)                                                                                                                                                                                                                                     tggtAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTa                                                                                                                                                                                                   <  1:460198/107‑1 (MQ=255)                                                                                                                                                                                                                                     tggtAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGCTAGCGGTTGTAATAGGTCGNACCGTGGCTGCCGATGGTGTGTAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCa                           >  1:547321/1‑275 (MQ=255)                                                                                                                                                                                                                                          aaTTTATCCTGATGTTCTTTCAGCAGATTAATCGCtt                                                                                                                                                                                                                                                                    >  1:575220/1‑37 (MQ=255)                                                                                                                                                                                                                                              tATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATc                                                                                                                                                                                                                                                                <  2:575211/37‑1 (MQ=255)                                                                                                                                                                                                                                              tATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATATCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGTAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCTNTATAGCATTc                   >  2:58119/1‑274 (MQ=255)                                                                                                                                                                                                                                               aTCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCt                                                                                                                                                                                            >  1:547564/1‑104 (MQ=255)                                                                                                                                                                                                                                                tcttGATGTTCTTTCAGCAGATTAATCGTTTTATCAACAATATAGTGGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTATTTGGTACAGGTCTTGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGTAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGc                 <  1:438378/271‑1 (MQ=255)                                                                                                                                                                                                                                                  cTGATGTTCTGTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGTAAGACAATCACGCCATCACCTTGCAGGt                                                                    <  1:299641/221‑1 (MQ=255)                                                                                                                                                                                                                                                   tGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCTGGAt                                                                                                                                                                                        <  2:547555/104‑1 (MQ=255)                                                                                                                                                                                                                                                    gATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCg                                                                                                                                            >  2:236175/1‑147 (MQ=255)                                                                                                                                                                                                                                                     aTGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTCTGGTACAGGTCTGGATCTCATTGGTGTCGCAGTTTGGGGTAATTTTCCTGAACTGAGGCGGTTAGCGGTTGTAAt                                                                                                                             >  2:146062/1‑161 (MQ=255)                                                                                                                                                                                                                                                        ttCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATa                                                                                                                                        <  1:236180/147‑1 (MQ=255)                                                                                                                                                                                                                                                         tCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGt                                                                                                                         <  1:146063/161‑1 (MQ=255)                                                                                                                                                                                                                                                              catcagTTTTATTGCTTTATCAACAATATAGTCGACGTAAATCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGTAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGAt  <  1:304021/272‑1 (MQ=255)                                                                                                                                                                                                                                                              caccagATTAATCGCGTTATCAACAGTTTAGTCTAGGTAATCCAGCGTGTTGTCGTATGTGTTCACCAGTTGCTCTTGGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGTAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGAt  <  2:196182/272‑1 (MQ=255)                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                               ATCCCAATAGCGTGGAGAATAAATTGTCTTGTGAATAGTGTTGCGTTTGCGCCTGTTTTTGCAGGCAGTTCTGGTCAACCTGATACCGTTTTTGATAATCCTCCGACAGCCACAGCAGCATCGGCACCTGTTTTTGGCTATCCGGGGCGATGGCATAAGGCAGACCGTGCAGATAGATGCCATTTTCACCTAACGATTCACCGTGGTCAGAAAGATAAACCAGGCTGGTGGTAAATTTATCCTGATGTTCTTTCAGCAGATTAATCGCTTTATCAACAATATAGTCGACGTAAACCAGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGTAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGAT  >  CP009273/4323838‑4324365

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.