New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 4362664 =90 (2.340)4 (0.110) 4/294 NT 4.8% coding (39/354 nt) yjeI DUF4156 family lipoprotein
?CP009273 4362902 = 76 (2.110)coding (277/354 nt) yjeI DUF4156 family lipoprotein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 106 total aligned reads displayed.

TACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAGGCGCAGAGTGCCAGCTGATTGGTACTGCGACAGGTAAGCAAAGCAACTGGCTTTCCGGGCAACACGGAGAAGAAGGCGGTTCTATGCGCGGCGCAGCAAACGATCTGCGCAACCAGGCGGCTGCAATGGGCGGTAACGTGATTTATGGCATCAGTAGCCCGTCGCAGGGAATGTTGTC  >  CP009273/4362404‑4362921
                                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                                  
tACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCAAGGAAAATACTTAGCAGGGCGTGTCGGTGCCGCGCTACTGCTGGCggg                                                                                                                                                                                                                                                      >  2:719297/1‑275 (MQ=255)
                aaCGATGCAGCGGAGTTAGGCGCTGCGGGCGGGATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATNAACAAACCCCCGGGCAGATATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCCACTGATGGCGGGTTGTAGCTCCAGCAAc                                                                                                                                                                                                                                      <  1:537015/275‑1 (MQ=255)
                                      tggggggCGGTCANGGAGGCATGGCTGGCGTTGGCGGCATGATGTAATTGCCCTGCACCTAGCAGAAATAAACAAACCCCCGGGAAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCCCCAGCAACGAATTGAGTGCGGCCGGTccg                                                                                                                                                                                                                 <  2:531273/269‑3 (MQ=255)
                                               gTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGACATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCATAGTGTACGCa                                                                                                                                                                                                       <  1:719307/275‑1 (MQ=255)
                                                                   aTGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGAt                                                                                                                                                                                                                                                            >  2:366231/1‑202 (MQ=255)
                                                                   aTGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGCGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCa                                                                                                                                                                                     >  1:640157/1‑272 (MQ=255)
                                                                       gcggcATGATGTAATTGCCCTGCATCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCg                                                                                                                                                                                                                                                        <  1:366237/202‑1 (MQ=255)
                                                                                          cTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAGGCGCAGAGTGcc                                                                                                                                                                        >  1:182059/1‑262 (MQ=255)
                                                                                          cTGCACATCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAGGCGCAGAGTGcc                                                                                                                                                                        <  2:182056/262‑1 (MQ=255)
                                                                                            agcattcaatcagttgcaatgccttatgtaggcctgataagcgaagcgcatcaggcaattatacgtttgtcacccagcctctggatcacatcagttcgggcacttataaacctgaccgataatctggctatccgtcgggacaaaactggacaacattcccagcgacggGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGGGGACGAGCAGCCAGGCGCAGAGGGCCAGTntattggatcta                                                                                                                                                         <  2:65469‑M1/107‑6 (MQ=255)
                                                                                             cACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCaa                                                                                                                                                                                                                                       >  1:302248/1‑197 (MQ=255)
                                                                                                 tCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGaa                                                                                                                                                                                                                                   <  2:302242/197‑1 (MQ=255)
                                                                                                  cGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGa                                                                                                                                                                                                                                                             >  2:219689/1‑170 (MQ=255)
                                                                                                      gAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGc                                                                                                                                                                                                                                                         <  1:219694/170‑1 (MQ=255)
                                                                                                           agaccacgnaccGGGCAGGATGTTCTGGGGTTTTTTCTTTTGGTCATCTTTCTAGTAGAATGGTCGGTCACGTACGCAGCGAGTGGCGTCCAGCTCATTTAGTAGGGTGATTAACATGAACGTAGAATACTTAGCCGGTATTGTAGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAGGCGCAGAGTGCCAGCTGATTGGTACTGCGACAGGTaagc                                                                                                                                             <  2:71929/262‑1 (MQ=255)
                                                                                                             acaaacCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGa                                                                                                                                                                                               >  1:309012/1‑220 (MQ=255)
                                                                                                                 acCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAAt                                                                                                                                                                                                                                  >  1:385777/1‑182 (MQ=255)
                                                                                                                 acCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCAAGGCGCAGAGGGCCCGCTGAGTGGGACGGCGACGGCTCcgcaaagtaatg                                                                                                                                    >  2:600069/1‑273 (MQ=255)
                                                                                                                     ccGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAg                                                                                                                                                                                                                              <  2:385771/182‑1 (MQ=255)
                                                                                                                       gggCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCaa                                                                                                                                                                                                                                       >  2:54962/1‑171 (MQ=255)
                                                                                                                           aGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGaa                                                                                                                                                                                                                                   <  1:54962/171‑1 (MQ=255)
                                                                                                                                              tCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCcgcg                                                                                                                                                                                                                                                                    <  2:211490/119‑1 (MQ=255)
                                                                                                                                                  ttGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCg                                                                                                                                                                                                                      >  2:702197/1‑161 (MQ=255)
                                                                                                                                                  ttGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCagag                                                                                                                                                                                                               >  2:242190/1‑168 (MQ=255)
                                                                                                                                                     gTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAGGCGCAGAGTGCCAGCTGATTGGTACTGCGACAGGTAAGCAAAGCAACTGGCTTTCCGGGCAACACGGAGAAGAAGGCGGTTCTa                                                                                                >  1:242405/1‑275 (MQ=255)
                                                                                                                                                      tCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCa                                                                                                                                                                                                                  <  1:702206/161‑1 (MQ=255)
                                                                                                                                                      tCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTa                                                                                                                                                                                                           <  1:242195/168‑1 (MQ=255)
                                                                                                                                                            gtttgtcacccagcctctggatcacatcagttcgggcacttataaacctgaccgataatctggctatccgtcgggacaaaactggacaacattccctgcgacggGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGaggagc                                                                                                                                                                                       <  1:392957‑M1/77‑1 (MQ=255)
                                                                                                                                                                gtcacccagcctctggatcacatcagttcgggcacttataaacctgaccgataatctggctatccgtcgggacaaaactggacaacattccctgcgacggGCTa                                                                                                                                                                                                                                                                 <  2:110894‑M1/4‑1 (MQ=255)
                                                                                                                                                                gtcacccagcctctggatcacatcagttcgggcacttataaacctgaccgataatctggctatccgtcgggacaaaactggacaacattccctgcgacggGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAgg                                                                                                                                                                                   >  2:392951‑M1/101‑181 (MQ=255)
                                                                                                                                                                    taAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTa                                                                                                                                                                                                                                                 >  1:334120/1‑116 (MQ=255)
                                                                                                                                                                    cccagcctctggatcacatcagttcgggcacttataaacctgaccgataatctggctatccgtcgggacaaaactggacaacattccctgcgacggGCTACTGa                                                                                                                                                                                                                                                             >  1:110895‑M1/97‑104 (MQ=255)
                                                                                                                                                                     aaGATGCAGGAAAGGACGACGCGGGTGGCGTCGAGCTCATTGATTATGGGGAATAACATGTACGTAAAATACTTAGCAGGGAGTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTGCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAGGCGCAGAGTGCCAGCTGATTGGTACTGCGACAGGTAAGCAAAGCAACTGGCTTTCCGGGCAACACGGAGAAGAAGGCGGTTCTATGCGCGGCGCAGCaa                                                                                 <  2:640148/274‑1 (MQ=255)
                                                                                                                                                                       gATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCagag                                                                                                                                                                                                               >  2:507176/1‑147 (MQ=255)
                                                                                                                                                                        aTTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTc                                                                                                                                                                                                                                             <  2:334114/116‑1 (MQ=255)
                                                                                                                                                                           cAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCATCGAATTGAGTGCTGCCGGTCAGAGTGTa                                                                                                                                                                                                           <  1:507183/147‑1 (MQ=255)
                                                                                                                                                                           cAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAgg                                                                                                                                                                                   >  1:597603/1‑170 (MQ=255)
                                                                                                                                                                            ctggatcacatcagttcgggcacttataaacctgaccgataatctggctatccgtcgggacaaaactggacaacattcccagcgacggGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAGGCGCAGAGTGCCAGCTGATTGGTACTGCGACAGGTAAGCAAAGCAACTGGCTTTCCGGGCAACACGGAGAAGAAGGCGGTTCTATGCGCGGCGCAGCAAACGATCt                                                                          >  1:65470‑M1/89‑274 (MQ=255)
                                                                                                                                                                            aGACACGGACGACGCGAGTGGCGTCCAGCTGATTGATTAGGGGGAGGAACAGGCACGTAAGATACTGAGCCGGGGTTGTCGGTGCCGCGCTACTGATGACGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAGGCGCAGAGTGCCAGCTGATTGGTACGGCGACAGGTAAGCAAAGCAACAGGATTCCCGGGCAACACGGAGAAGAAGGCGGGTCGAGTAGCCGCCCAGCGAACGACCt                                                                          >  2:596728/1‑274 (MQ=255)
                                                                                                                                                                            aGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAGGCGCAGAGTGCCAGCTGATTGGTACTGCGACAGGTa                                                                                                                                                >  2:274451/1‑204 (MQ=255)
                                                                                                                                                                            aGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAGGCGCAGAGTGCCAGCTGATTGGTACTGCGACAGGTAAGCAAAGCAACTGGCTTTCCGGGCAACACGGAGAAGACGGCGGTTCTATGCGCGGCACAGCACACGaac                                                                           >  2:618596/1‑271 (MQ=255)
                                                                                                                                                                               cacGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAGGCGCa                                                                                                                                                                               <  2:597594/170‑1 (MQ=255)
                                                                                                                                                                                acGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAGGCGCAGAGTGCCAGCTGATTGGTACTGCGACAGGTaagca                                                                                                                                            <  1:274456/204‑1 (MQ=255)
                                                                                                                                                                                   gacgacGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGcc                                                                                                                                                                                                                       >  2:630993/1‑127 (MQ=255)
                                                                                                                                                                                       acgCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTc                                                                                                                                                                                                                   <  1:631002/127‑1 (MQ=255)
                                                                                                                                                                                                   tCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTg                                                                                                                                                                                                                                                              >  2:441518/1‑72 (MQ=255)
                                                                                                                                                                                                   tCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAGGCGCAGAGTg                                                                                                                                                                          >  2:362569/1‑155 (MQ=255)
                                                                                                                                                                                                   tCCAGCTCATTGATTATGGGGAATAACATGCAAGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAGGCGCAGAGGGCCAGCTGATTGGTACTGCGACAGGTAAGCAAAGCAACTGGCTTTCCGGGCAACACGGAGAAGAAGGCGGTTCTATGCGCGGCGCAGCAAACGATCTGCGCAACCAGGCGGCTGCAATggg                                                  <  1:456057/275‑1 (MQ=255)
                                                                                                                                                                                                       gCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATgg                                                                                                                                                                                                                                                          <  1:441525/72‑1 (MQ=255)
                                                                                                                                                                                                       gCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAGGCGCAGAGTGCCAg                                                                                                                                                                      <  1:362575/155‑1 (MQ=255)
                                                                                                                                                                                                                  aTGGGTAATAACAGGCACGGTACATTCTTCGCATTGGGTGTCGGTGCCGGGCTACTGATGGCGGGGTGTTGCTCCAGCAACGAAGTGGGGGCTGCCGGCCAGAGTGTACCCATTTGTGG‑CGGGCAGCCAGGCGCAGAGGGCCAGCTGATTGGTACTGCGACAGGTAAGCCAAGCAACTGGCTTTCCGGGTAACACGGAGAAGAAGGCGGTTCTATGCGCGGCGCAGCAATCGATCTGCGCAACCAGGCGGTTGCAATGGGCGGTAACGTGAttt                                    <  2:722767/274‑1 (MQ=255)
                                                                                                                                                                                                                  aTGGGGAATAGCATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAGGCGCAGGGTGCCAGCTGATTGGTACTGAGACAGGTAAGCAAAGCAACTGGCTTTCCGGGCAACACGGAGAAGAAGGCGGTTCTATGCGCGGCGAAGCAAACGAACTGCGCAAACAGGAGGCTGCAATGGGCGGTAACGGGAttc                                    >  1:722777/1‑273 (MQ=255)
                                                                                                                                                                                                                   tGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACGGATGGCGGGTTGTAGCTCCAGCAACGAAGTGAGGGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGTCAGGCGCAGAGTGCCAGCTGATTGGTACTGCGACAGGTAAGCAAAGCAACTGGCTTTCCGGGCAACACGGAGAAGAAGGCGGTTCTATGCGCGGCGCAGCAAACGATCTGCGCAACCAGGCGGCTGCAATGGGCGGTAACGTGATTTAt                                  <  1:135239/275‑1 (MQ=255)
                                                                                                                                                                                                                     gggAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAgt                                                                                                                                                                                                              >  2:410048/1‑102 (MQ=255)
                                                                                                                                                                                                                     gggAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGa                                                                                                                                                                                               >  2:252789/1‑116 (MQ=255)
                                                                                                                                                                                                                      gtaaTAACAGGCACGTAAAATACTTAGCAGGTATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTACCTCCAGCAACGAATTGAGTGCTTCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAGGCGCAGAGTGCCAGCTGATTGGTACTGCGACAGGTaagca                                                                                                                                            <  1:145375/164‑1 (MQ=255)
                                                                                                                                                                                                                         aTAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCg                                                                                                                                                                                                                      >  2:60856/1‑90 (MQ=255)
                                                                                                                                                                                                                         aTAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTAc                                                                                                                                                                                                          <  1:410055/102‑1 (MQ=255)
                                                                                                                                                                                                                         aTAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTAc                                                                                                                                                                                                          >  1:53680/1‑102 (MQ=255)
                                                                                                                                                                                                                         aTAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGag                                                                                                                                                                                           <  1:252794/116‑1 (MQ=255)
                                                                                                                                                                                                                          gctatccgtcgggacaaaactggacaacattccctgcgacggGCTACTGAt                                                                                                                                                                                                                                                            <  1:296429‑M1/9‑1 (MQ=255)
                                                                                                                                                                                                                             cATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCa                                                                                                                                                                                                                  <  1:60857/90‑1 (MQ=255)
                                                                                                                                                                                                                             cATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑t                                                                                                                                                                                                     <  2:53680/102‑1 (MQ=255)
                                                                                                                                                                                                                               tGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAGGCGCAGAGTGCCAGCTGATTGGTACTGCGACAGGTAAGCAAAGCAACTGGCTTTCCGGGCAACACGGAGAAGAAGGCGGTTCTATGCGCGGCGCAGCAAACGATCTGCGCAACCAGGCGGCTGAAATGGGCGGCAACGTGAttt                                    >  1:138568/1‑261 (MQ=255)
                                                                                                                                                                                                                                  aCGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAGGCGCAGAGTGCCAGCTGATTGGTACTGCGACAGGTAAGCAAAGCAACTGGCTTTCCGGGCAACACGGagaag                                                                                                            >  2:168695/1‑186 (MQ=255)
                                                                                                                                                                                                                                    gTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAGgcgc                                                                                                                                                                                >  1:78318/1‑116 (MQ=255)
                                                                                                                                                                                                                                      aaaaTACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAGGCGCAGAGTGc                                                                                                                                                                         <  1:119529/121‑1 (MQ=255)
                                                                                                                                                                                                                                      aaaaTACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAGGCGCAGAGTGCCAGCTGATTGGTACTGCGACAGGTAAGCAAAGCAACTGGCTTTCCGGGCAACACGGAGAAGAAgg                                                                                                        <  1:168698/186‑1 (MQ=255)
                                                                                                                                                                                                                                       aaaTACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAGGCGCAGAGTGCCAGCTGATTGGTACTGCGACAGGTaagcaaa                                                                                                                                          >  1:224756/1‑151 (MQ=255)
                                                                                                                                                                                                                                           aCTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAGGCGCAGAGTGCCAGCTGATTGGTACTGCGACAGGTAagcaaagcaa                                                                                                                                      <  2:224751/151‑1 (MQ=255)
                                                                                                                                                                                                                                             ttAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAGGCGCAGAGTg                                                                                                                                                                          >  2:420173/1‑113 (MQ=255)
                                                                                                                                                                                                                                              tAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAg                                                                                                                                                                                                                                          >  1:239055/1‑49 (MQ=255)
                                                                                                                                                                                                                                              tAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAgtg                                                                                                                                                                                                             >  2:609559/1‑78 (MQ=255)
                                                                                                                                                                                                                                              tAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑tt                                                                                                                                                                                                    >  1:321735/1‑86 (MQ=255)
                                                                                                                                                                                                                                              tAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAGGCGCAGAGTGCCAGCTGATTGGTa                                                                                                                                                            >  1:259170/1‑126 (MQ=255)
                                                                                                                                                                                                                                              tAGCAGGGATTGTCGGTGCCGCCCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCagag                                                                                                                                                                                                               >  2:74153/1‑76 (MQ=255)
                                                                                                                                                                                                                                              tAGCAGGGATAGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAGGCGCAGAGTGCCAGCTGATTGGTACTGCGACAGGTAAGCAAAGCAACTGGCTTTCCGGGCAACACGGagaag                                                                                                            >  1:708497/1‑174 (MQ=255)
                                                                                                                                                                                                                                                 cAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAGGCGCAGAGTGCCAg                                                                                                                                                                      <  1:420180/113‑1 (MQ=255)
                                                                                                                                                                                                                                                  aGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTNCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAGGCGCAGAGTGCCAGCTGATTGGTACTGCGACAGGTAAGCAAAGCAACTGGCTTTCCGGGCAACACGGAGAAGAAGGCGGTTCTATGCGCGGCGCAGCCCACGGTCTGCGCAGCCAGGCGGCTGCAAt                                                     <  1:486223/225‑1 (MQ=255)
                                                                                                                                                                                                                                                  aGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAAc                                                                                                                                                                                                                                      <  2:239050/49‑1 (MQ=255)
                                                                                                                                                                                                                                                  aGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACg                                                                                                                                                                                                         <  1:609568/78‑1 (MQ=255)
                                                                                                                                                                                                                                                  aGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTgg                                                                                                                                                                                                <  2:321729/86‑1 (MQ=255)
                                                                                                                                                                                                                                                  aGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAGGCGCAGAGTGCCAGCTGATTGGTACTGc                                                                                                                                                        <  2:259165/126‑1 (MQ=255)
                                                                                                                                                                                                                                                  aGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAGGCGCAGAGTGCCAGCTGATTGGTACTGCGACAGGTAAGCAAAGCAACTGGCTTTCCGGGCAACACGGagaaga                                                                                                           <  2:479722/171‑1 (MQ=255)
                                                                                                                                                                                                                                                  aGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAGGCGCAGAGTGCCAGCTGATTGGTACTGCGACAGGTAAGCAAAGCAACTGGCTTTCCGGGCAACACGGAGAAGAAgg                                                                                                        <  2:708487/174‑1 (MQ=255)
                                                                                                                                                                                                                                                    gggtgggcGGGGCCGTGCTAATGATGGCGGGGTGTCGCTCCAGCAACGAATGGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAGGCGCAGAGTGCCAGCTGATTGGTAATGCGACAGGTAAGCAAAGCAACTGGCTGTCCGGGCAACACGGAGAAGAAGGCGGTTCTATGCGCGGCGCAGCAAACGATCTGCGCAACCAGGCGGCTGCAATGGGCGGTAACGTGATTTATGGCATCAGTAGCCCGTCGCAGGGAATGTTGTc  <  2:242400/267‑1 (MQ=255)
                                                                                                                                                                                                                                                    ggATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGa                                                                                                                                                                                               >  2:214141/1‑85 (MQ=255)
                                                                                                                                                                                                                                                    ggATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAGGCGCAGAGTGCCAGCTGATTGGTACTGCGACAGGTAAGCAAAGCAACTGGCTTTCCGGGCAACACGGAGAAGAAGGCGGTTCTATGCGCGGCGCAGCAAACGATCTGCGCa                                                                     >  1:389545/1‑207 (MQ=255)
                                                                                                                                                                                                                                                      aTTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAGGCGCAGAGTGCCAGCTGATTGGTACTGCg                                                                                                                                                       >  1:117848/1‑123 (MQ=255)
                                                                                                                                                                                                                                                        tGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGag                                                                                                                                                                                           <  1:214145/85‑1 (MQ=255)
                                                                                                                                                                                                                                                        tGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAGGCGCAGAGTGCCAGCTGATTGGTACTGCGACAGGTAAGCAAAGCAACTGGCTTTCCGGGCAACACGGAGAAGAAGGCGGTTCTATGCGCGGCGCAGCAAACGATCTGCGCAACCa                                                                 <  2:389539/207‑1 (MQ=255)
                                                                                                                                                                                                                                                          tCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAGGCGCAGAGTGCCAGCTGATTGGTACTGCGACAg                                                                                                                                                   <  2:117847/123‑1 (MQ=255)
                                                                                                                                                                                                                                                              tGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTg                                                                                                                                                                                                                                >  1:381085/1‑43 (MQ=255)
                                                                                                                                                                                                                                                               gCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCg                                                                                                                                                                                                                      >  2:238739/1‑52 (MQ=255)
                                                                                                                                                                                                                                                                ccGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAg                                                                                                                                                                                                                              >  1:669516/1‑43 (MQ=255)
                                                                                                                                                                                                                                                                ccGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCg                                                                                                                                                                                                                      >  2:311490/1‑51 (MQ=255)
                                                                                                                                                                                                                                                                  gcgcTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGtg                                                                                                                                                                                                                            <  2:381079/43‑1 (MQ=255)
                                                                                                                                                                                                                                                                   cgcTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCa                                                                                                                                                                                                                  <  1:238744/52‑1 (MQ=255)
                                                                                                                                                                                                                                                                    GCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGtgct                                                                                                                                                                                                                          >  2:669507‑M1/1‑43 (MQ=255)
                                                                                                                                                                                                                                                                    GCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCa                                                                                                                                                                                                                  >  1:311496‑M1/1‑51 (MQ=255)
                                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                                  
TACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCA‑TTGTGGACGAGCAGCCAGGCGCAGAGTGCCAGCTGATTGGTACTGCGACAGGTAAGCAAAGCAACTGGCTTTCCGGGCAACACGGAGAAGAAGGCGGTTCTATGCGCGGCGCAGCAAACGATCTGCGCAACCAGGCGGCTGCAATGGGCGGTAACGTGATTTATGGCATCAGTAGCCCGTCGCAGGGAATGTTGTC  >  CP009273/4362404‑4362921

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.