New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	4581671 =	78 (2.030)	5 (0.140)	5/294	NT	6.2%	coding (198/1656 nt)	tsr	methyl‑accepting chemotaxis protein I, serine sensor receptor
	?	CP009273	4582630 =	78 (2.170)					coding (1157/1656 nt)	tsr	methyl‑accepting chemotaxis protein I, serine sensor receptor

GCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGGAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAACTGGGCGGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTGTTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACC  >  CP009273/4581405‑4581941                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                               gcgGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCAGAATGGCAGCTGGGGCGCGTTGTTGCAACCGCGTTACACCCCCAAc                                                                                                                                                                                                                                                                          >  2:710819/1‑273 (MQ=255)      cctgatcgataccacggctctgctcatcagaagcagaagcaatttcgcccataatgtccgtcacgcgggtcacggcgctgacaatctccgccattgtttccccggcgctttcgaccagcgtagagccaacatccactttccccaccgagtcttcaatcaggcttttaatttcacgagcagcctgggcgctgcgatgggccagattacgcacttctcccgcgaccaccccaaaaccgaccccatgctcccccgcacgcgcagccccacccaccgag                                                                                                                                                                                                                                                                   <  1:283606‑M1/14‑13 (MQ=255)         ttCATATAGTTTTTCCTTTCCAGTCCGTATATCTTGCATCTGTCCACAGGAAAGAGAAATCATGTTAAAACGTATCAAAATTGTGACCAGCTGACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCgtgt                                                                                                                                                                                                                                                                 <  1:87695/274‑1 (MQ=255)           cATAAAGTTTTTCCTCTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATc                                                                                                                                                                                                                                                              <  1:322585/275‑1 (MQ=255)               taccacggctctgctcatcagaagcagaagcaatttcgcccataatgtccgtcacgcgggtcacggcgctgacaatctccgccattgtttccccggcgctttcgaccagcgtagagccaacatccactttccccaccgagtcttcaatcaggcttttaatttcacgagccgcctgggcgctgcgctgggccagattacgcacttctcccgcgaccaccgcaaaaccgcgccctagcccacccgcacgagcaggcgcaaccgtctcctcccaccc                                                                                                                                                                                                                                                           <  2:143959‑M1/22‑14 (MQ=255)                    tttcctttccAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACCTCAGGCGGTCTGTTCTTTAATGCTTTAAAGAATGACACAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCCGCAATCCACGCTGAATGGAAGCTGGGTCGCGTTGTTGCAGACGCGTAACCCCCTCACCCGCGCGGGTATCCGATACatg                                                                                                                                                                                                                                                     >  1:301693/1‑275 (MQ=255)                        ctttccAGGCCGAAAATCGTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACatga                                                                                                                                                                                                                                                    <  1:443747/272‑1 (MQ=255)                                                            aaGAGAATCCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGTCATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTgctg                                                                                                                                                                                                             <  1:710829/275‑1 (MQ=255)                                                             agagAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATACGCTACATGATGGATCAGAAAAATATTGGTAGCGGTTCAACGGtgtctt                                                                                                                                                                                                             >  2:600808/1‑269 (MQ=255)                                                               agaAACCATGTTAAAACGTATCAAAATTATCACCAGCTTACTGCTGGTTTTAGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTAAATGGCAGCTGTGTCGCNTTGTTGCAGACGCGTAAAACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTATAAACGGTTCAACCTTTgctgaac                                                                                                                                                                                                          >  1:506282/1‑273 (MQ=255)                                                                    ccATGTTAAAGCGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACcgcgc                                                                                                                                                                                                                                                                     >  1:721662/1‑211 (MQ=255)                                                                      aTGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTGTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACcgcg                                                                                                                                                                                                                                                                      <  1:141781/208‑1 (MQ=255)                                                                        gTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTTGTTTTGGCNGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCTCCCGCGCAGGTATTCGCTACATGATGGAt                                                                                                                                                                                                                                               <  1:495977/229‑1 (MQ=255)                                                                        gTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGt                                                                                                                                                                                                                                                                 <  2:721652/211‑1 (MQ=255)                                                                                                   cTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGc                                                                                                                                                                                                                                                           >  1:285330/1‑190 (MQ=255)                                                                                                       ctgctgGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACa                                                                                                                                                                                                                                                       <  2:285325/190‑1 (MQ=255)                                                                                                             gTTTTGTCCGTTTTTGTCCTTTTACAACCGACATCAGGCGGTCGTTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAATCGCGCGGGTATCCGCTACntgat                                                                                                                                                                                                                                                   >  1:522931/1‑188 (MQ=255)                                                                                                                 tGGCCGTTTTTGGCCTTTTACAACTGACATCATGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGAt                                                                                                                                                                                                                                               <  2:522924/188‑1 (MQ=255)                                                                                                                          agcgtagagccaacatccactttccccaccgagtcttcaatcaggcttttaatttcacgagccgcctgggcgctgcgctgggccagattacgcacttctcccgcgaccaccgcaaaaccgcgcccttgctcacccgcccgcgcagCCTCAACCGCGCGGGTATCCGCTCCATGCTGGATCa                                                                                                                                                                                                                                             <  2:149938‑M1/36‑1 (MQ=255)                                                                                                                                 tttACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACatgat                                                                                                                                                                                                                                                   >  2:288348/1‑168 (MQ=255)                                                                                                                                     cAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGAt                                                                                                                                                                                                                                               <  1:288353/168‑1 (MQ=255)                                                                                                                                          aggctccgacGGTCTGTTCTTTAATGCCTTAAAACATGACAAAGAAAATTTCACTGTTTTACAACCCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGGAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAACTGGGCGGATTACGAAGCGTTGCCGCGTGAcc                                                                                                                               <  2:110374/266‑1 (MQ=255)                                                                                                                                           aaaTCAGGCGGTCTGTTCTTTAATGCCTAAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGGAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAACTGGGCGGATTACGAAGCGTTGCCGCGTGAcc                                                                                                                               <  1:67300/272‑1 (MQ=255)                                                                                                                                            cATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCa                                                                                                                                                                                                                                             >  1:178027/1‑163 (MQ=255)                                                                                                                                             aTCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTgctgagctga                                                                                                                                                                                                       >  1:248274/1‑200 (MQ=255)                                                                                                                                             aTCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGGAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAACTGGGCGGATTACGAAGCGTTGCCGCGt                                                                                                                                   >  1:110375/1‑268 (MQ=255)                                                                                                                                             aTCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAAAACCCTCAACCGCGAGGGTATCCTCTACATGATGGATCAGAATAATATTGGTAGCGGtt                                                                                                                                                                                                                         >  1:639816/1‑182 (MQ=255)                                                                                                                                                aGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGaat                                                                                                                                                                                                                                         <  2:178024/163‑1 (MQ=255)                                                                                                                                                 ggCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATTga                                                                                                                                                                                                   <  2:248269/200‑1 (MQ=255)                                                                                                                                                     gTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGGAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAACTGGGCGGATTACGAAGCGTTGCCGCGTGACCCGCGTCagag                                                                                                                     >  1:210129/1‑274 (MQ=255)                                                                                                                                                              atcgtGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGGGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGGATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGGAGAGTGCCAGTATTTCGCGGAAACAGGCGGAAAAAAACTGGGCGGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCa                                                                                                           <  2:210125/271‑1 (MQ=255)                                                                                                                                                               tAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACcgcgc                                                                                                                                                                                                                                                                     >  2:269822/1‑120 (MQ=255)                                                                                                                                                               tAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTgctgagctga                                                                                                                                                                                                       >  2:362462/1‑182 (MQ=255)                                                                                                                                                                   gCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGt                                                                                                                                                                                                                                                                 <  1:269827/120‑1 (MQ=255)                                                                                                                                                                   gCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGga                                                                                                                                                                                                   <  1:362468/182‑1 (MQ=255)                                                                                                                                                                    ccTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAg                                                                                                                                                                                                                                            >  1:101180/1‑140 (MQ=255)                                                                                                                                                                    ccTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTgctgagct                                                                                                                                                                                                         >  2:257577/1‑175 (MQ=255)                                                                                                                                                                       tAAAGAATGACAAAGAGAATTTCACTGTTTTACAAACCATTCGTCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGGAGAGTGNCAGTATTTCGCTGAAACAGGCGGAAAAAAACTGGGCGGATTACGAAGCGTTGCCGCGTGACCCGCGTAAGAGCACCGCCGCAGCGGCaga                                                                                                   >  1:521250/1‑274 (MQ=255)                                                                                                                                                                       tAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACatgat                                                                                                                                                                                                                                                   >  1:207789/1‑130 (MQ=255)                                                                                                                                                                        aaaGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGaata                                                                                                                                                                                                                                        <  2:101179/140‑1 (MQ=255)                                                                                                                                                                        aaaGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATg                                                                                                                                                                                                     <  1:257582/175‑1 (MQ=255)                                                                                                                                                                           gAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGAt                                                                                                                                                                                                                                               <  2:207785/130‑1 (MQ=255)                                                                                                                                                                              tGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTAc                                                                                                                                                                                                                                                        >  2:67801/1‑118 (MQ=255)                                                                                                                                                                              tGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACatgat                                                                                                                                                                                                                                                   >  1:696984/1‑123 (MQ=255)                                                                                                                                                                              tGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCa                                                                                                                                                                                                                                             >  1:355911/1‑129 (MQ=255)                                                                                                                                                                              tGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGGAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAACTGGGCGGATTACGAAGCGTTGCCGCGTGAACCGCGTCAGAGCACCGCCGCAGCAGCAGAGATCaaaa                                                                                           >  1:271994/1‑274 (MQ=255)                                                                                                                                                                               tacaaacaaAATGTCACAGTTGGACAACCCATTCGTCAGCCGCAAGCCCCGCGGAATGTCATCTGGGTCGCGTTGTGGCAGACGCGTAACACCCTCAACCGCGCTGGTATCCGCTACATGGTGTATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCGGCTGGAGATCGCTAGTAGTGCACTGAAACAGGCGGAATTTACCGGGGCGGATTAGTAAGCTGTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACg                                                                                          <  2:301687/274‑1 (MQ=255)                                                                                                                                                                                tcacgagccgcctgggcgctgcgctgggccagattacgcacttctcccgcgaccaccgcaaaaccgcgcccttgctcacccgcacgcgcagCCTCAACCGCGCGGGTATCCGCTACATGATGGACCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGGAGAGTGCCAGTATTTCGCTGaaa                                                                                                                                                                             <  2:356541‑M1/100‑1 (MQ=255)                                                                                                                                                                                aCAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGGAGAGTGCCAGTAt                                                                                                                                                                                       >  1:111113/1‑181 (MQ=255)                                                                                                                                                                                  aaaGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACatga                                                                                                                                                                                                                                                    <  1:67802/118‑1 (MQ=255)                                                                                                                                                                                  aaaGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGAt                                                                                                                                                                                                                                               <  2:696975/123‑1 (MQ=255)                                                                                                                                                                                  aaaGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGaat                                                                                                                                                                                                                                         <  2:355905/129‑1 (MQ=255)                                                                                                                                                                                   aaGAAAACTTCACTGTTTCACAAACCATGCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTc                                                                                                                                                                                                                                                                             <  2:494825/92‑1 (MQ=255)                                                                                                                                                                                    gagccgcctgggcgctgcgctgggccagattacgcacttctcccgcgaccaccgcaaaaccgcgcccttgctcacccgcacgcgcagCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGGAGAGTGCCAGTATTTCGCTGAAACAgg                                                                                                                                                                         >  1:356547‑M1/88‑191 (MQ=255)                                                                                                                                                                                    aGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGGAGAGTGCCAGTATTTCg                                                                                                                                                                                   <  2:111112/181‑1 (MQ=255)                                                                                                                                                                                      aaaaTTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGGAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAACTGGGCGGATTACGAAGCGTTGCCGCGTGACCCGCGTCAAAGAACCGCCGCAGCGGCCAGGATCAANCGTAAttcc                                                                                   >  2:260694/1‑273 (MQ=255)                                                                                                                                                                                       caaTTTATCTGTTANACAAACCAGTAGCCAGCAGCACTCCACGCTTGATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGTTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGGAGAGGGCCAGTATTTCGCTGAAACAGGCGGAAAAAAACTGGGCGGATTACGAACCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACg                                                                                  <  2:521243/274‑1 (MQ=255)                                                                                                                                                                                                tGTTTTACAAACCATACGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGGAGAGTGCCAGTATTTCGCTGaaa                                                                                                                                                                             >  1:491729/1‑175 (MQ=255)                                                                                                                                                                                                  ttttACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTAc                                                                                                                                                                                                                                                        >  1:58445/1‑98 (MQ=255)                                                                                                                                                                                                    ttACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACatgat                                                                                                                                                                                                                                                   >  1:280067/1‑101 (MQ=255)                                                                                                                                                                                                    ttACAAACCATTCGCCAGCAGCAATCCACGCGGCATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGGAGAGTGCCAGTATTTCGCTGAAACAgg                                                                                                                                                                         <  2:491722/175‑1 (MQ=255)                                                                                                                                                                                                      aCAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACatga                                                                                                                                                                                                                                                    <  2:58444/98‑1 (MQ=255)                                                                                                                                                                                                        aaaCCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGAt                                                                                                                                                                                                                                               <  2:280062/101‑1 (MQ=255)                                                                                                                                                                                                          aCCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAgct                                                                                                                                                                                                                                          >  1:665696/1‑102 (MQ=255)                                                                                                                                                                                                          aCCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGCTAGCGGTTCAACCGTTGCTGAGCTGATGGAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAACTGGGCGGATTACGAATCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATAACGATCTNCTTCCCAATccgcc                                                               >  2:531146/1‑274 (MQ=255)                                                                                                                                                                                                               tCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCGCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTgctgag                                                                                                                                                                                                           >  2:372223/1‑130 (MQ=255)                                                                                                                                                                                                                cGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTTGCGGTTCAACCGTTgctg                                                                                                                                                                                                             <  1:565502/127‑1 (MQ=255)                                                                                                                                                                                                                   cagcagCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTgctgagctga                                                                                                                                                                                                       <  1:372229/130‑1 (MQ=255)                                                                                                                                                                                                                    cgcacttctcccgcgaccaccgcaaaaccgcgcccttgctcacccgcacgcgcagCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGGAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAACTGGGCgg                                                                                                                                                       <  2:299648‑M1/122‑1 (MQ=255)                                                                                                                                                                                                                      cagcaATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACatgat                                                                                                                                                                                                                                                   >  2:185273/1‑83 (MQ=255)                                                                                                                                                                                                                        cttctcccgcgaccaccgcaaaaccgcgcccttgctcacccgcacgcgcagCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGGAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAACTGGGCGGATTa                                                                                                                                                   >  1:299654‑M1/52‑177 (MQ=255)                                                                                                                                                                                                                         caATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGGAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAACTGGGCGGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCa                                                <  1:260699/275‑1 (MQ=255)                                                                                                                                                                                                                          aaTCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGAt                                                                                                                                                                                                                                               <  1:185276/83‑1 (MQ=255)                                                                                                                                                                                                                           aTCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAAc                                                                                                                                                                                                                                                                          >  2:362132/1‑55 (MQ=255)                                                                                                                                                                                                                               aCGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACcgcg                                                                                                                                                                                                                                                                      <  1:362138/55‑1 (MQ=255)                                                                                                                                                                                                                                       tGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTg                                                                                                                                                                                                                                  >  2:92845/1‑83 (MQ=255)                                                                                                                                                                                                                                           aGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAg                                                                                                                                                                                                                              <  1:92846/83‑1 (MQ=255)                                                                                                                                                                                                                                             cTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGtt                                                                                                                                                                                                                         >  1:225967/1‑86 (MQ=255)                                                                                                                                                                                                                                                 gTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAAc                                                                                                                                                                                                                     <  2:225962/86‑1 (MQ=255)                                                                                                                                                                                                                                                          ttgCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAatat                                                                                                                                                                                                                                    >  2:312691/1‑62 (MQ=255)                                                                                                                                                                                                                                                              aGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGt                                                                                                                                                                                                                                <  1:312697/62‑1 (MQ=255)                                                                                                                                                                                                                                                                aCGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGAt                                                                                                                                                                                                                                               <  2:563487/45‑1 (MQ=255)                                                                                                                                                                                                                                                                  gcgTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGGAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAACTGGGCGGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGc                                                                                                         >  1:629762/1‑177 (MQ=255)                                                                                                                                                                                                                                                                   cgTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAACAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGGAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAACTGGGCGGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCa                                                                                                                   >  1:696285/1‑166 (MQ=255)                                                                                                                                                                                                                                                                    gTAACACCCTCAACCGCGCGGGTATCCTCTACATGATGGATCAGaa                                                                                                                                                                                                                                          >  1:637731/1‑46 (MQ=255)                                                                                                                                                                                                                                                                    gTAACACCCTCAACCGCGCGGGTATCCGCTACatgat                                                                                                                                                                                                                                                   >  1:191126/1‑37 (MQ=255)                                                                                                                                                                                                                                                                      aaCACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGGAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAACTGGGCGGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCa                                                                                                     <  2:629753/177‑1 (MQ=255)                                                                                                                                                                                                                                                                       acacCCTCAACCGCGGGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGGAGAGTGCCAGNATTTCGCTGAAACAGGCGGAAAAAAACTGGGCGGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAATTGTTAGGTGCAGGCATAATCAACGAGTGCTTTGATCAGCCGAcc  <  1:531154/275‑1 (MQ=255)                                                                                                                                                                                                                                                                        cacCCTCAACCGCGCGGGTATCCGCTACATGATGGAt                                                                                                                                                                                                                                               <  2:191123/37‑1 (MQ=255)                                                                                                                                                                                                                                                                        cacCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGaataat                                                                                                                                                                                                                                      <  2:637722/46‑1 (MQ=255)                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                               GCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGGAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAACTGGGCGGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTGTTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACC  >  CP009273/4581405‑4581941

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.