New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 = 35954230 (0.780)7 (0.190) 7/298 NT 17.0% pseudogene (525/1125 nt) lacZ pseudogene, truncated
?CP009273 = 359651 40 (1.100)pseudogene (416/1125 nt) lacZ pseudogene, truncated

GCGGTGTATCGCTCGCCACTTCAACATCAACGGTAATCGCCATTTGACCACTACCATCAATCCGGTAGGTTTTCCGGCTGATAAATAAGGTTTTCCCCTGATGCTGCCACGCGTGAGCGGTCGTAATCAGCACCGCATCAGCAAGTGTATCTGCCGTGCACTGCAACAACGCTGCTTCGGCCTGGTAATGGCCCGCCGCCTTCCAGCGTTCGACCCAGGCGTTAGGGTCAATGCGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGGTGCACGGGTGAACTGATCGCGCAGCGGCGTCAGCAGTTGTTTTTTATCGCCAATCCACATCTGTGAAAGAAAGCCTGACTGGCGGTTAAATTGCCAACGCTTATTACCCAGCTCGATGCAAAAATCCATTTCGCTGGTGGTCAGATGCGGGATGGCGTGGGACGCGGCGGGGAGCGTCACACTGAGGTTTTCCGCCAGACGCCACTGCTGCCAGGCGCTGATGTGCCCGGCTTCTGACCATGCGGTCGCGTTCGGTTGCACTACGCG  >  CP009273/359382‑359919
                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                            
gCGGTGTATCGCTCGCCACTTCAACATCAACGGTAATCGCCATTTGACCACTACCATCAATCCGGTAGGTTTTCCAGCGGATAAATAAGGTTTTCCCCTGATGCTGCCACGCGTGAGCGGTCGTAATCAGCACCGCATCAGCAAGTGTATCTGCCGTGAACTGCAACAACGCTGCTTCGGCCTGGTAATGGCCCGCCGCCTTCCAGCGTTCGACCCAGGCGTTAGGGTCAATGCGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGgtgca                                                                                                                                                                                                                                                                         >  1:165660‑M2/1‑270 (MQ=255)
    tttATCGCTCGCCACTTCAACATCAACGGTAATCGCCATTTGACCACTACCATCAATCCGGTAGGTTTTCCGGCTGATAAATAAGGTTTTCCCCTGATGCTGCCACGCGTGAGCGGTCGTAATCAGCACCGCATCAGCAAGTGTATCTGCCGTGCACTGCAACAACGCTGCTTCGGCCTGGTAATGGCCCGCCGCCTTCCAGCGTTCGACCCAGGCGTTAGGGTCAATGCGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGGTGCACggg                                                                                                                                                                                                                                                                     <  1:417384/273‑1 (MQ=255)
                cACTTCAACATCAACGGTAATCGCCATTTGACCACTACCATCAATCCGGTAGGTTTTCCGGCTGATAAATAAGGTTTTCCCCTGATGCTGCCACGCGTGAGCGGTCGTAATCAGCACCGCATCAGCAAGTGTATCTGCCGTGCACTGCAACAACGCTGCTTCGGCCTGGTAATGGCCCGCCGCCTTCCAGCGTTCAACCCAGGCGTTAGGGTCAATGCGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGGGGCACGGGTGAACTGATcg                                                                                                                                                                                                                                                          >  1:687244/1‑274 (MQ=255)
                  cTTCAACATCAACGGTAATCGCCATTTGACCACTACCATCAATCCGGTAGGTTTTCCGGCTGATAAATAAGGTTTTCCCCTGATGCTGCCACGCGTGAGCGGTCGTAATCAGCACCGCATCAGCAAGTGTATCTGCCGTGCACTGCAACAACTCTGCTTCGGCCTGGTAATGGCCCGCCGCCTTCCAGCGTTCGACCCAGGCGTTAGGGTCAATGCGGGTCGCTTCACTTACGCCAATGACGTTATCCAGCGGTGCACGGGTGAATTGATccctc                                                                                                                                                                                                                                                       >  2:92202/1‑271 (MQ=255)
                                ttAAACGCCATTTGCCCCCTCCCATCATTCCTGTTGGTTTTCCGGCTGTTAAAGAAGGTTTTCCCCTGATACTGCCACGCGTGAGCGGTCGTAATCAGCACCGCATCAGCAAGTGTATCTGCCGTTCACTGCAACAACGCTGCTTCGGCCTGGTAATGGCCCGCCGCCTTCCAGCGTTCGACCCAGGCGTTAGGGTCAATGCGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGGTGCACGGGTGAACTGATCGCGCAGCGGCGTcagcag                                                                                                                                                                                                                                         <  2:687235/274‑1 (MQ=255)
                                   aTCGCCATTTGACCACTACCATCAATCCGGTAGGTTTTCCGGCTGATAAATAAGGTTTTCCCCTGATGCTGCCACGCGTGAGCGGTCGTAATCAGCACCGCATCAGCAAGTGTATCTGCCGTGCACTGCAACAACGCTGCTTCGGCCTGGTAATGGCCCGCCGCCTTCCAGCGTTCGACCCAGGCGTTAGGGTCAATGCGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGGTGCACGGGTGAACTGATCGCGCAGCGGCGTCAGCAgttg                                                                                                                                                                                                                                      >  1:437378/1‑275 (MQ=255)
                                               ccACTACCATCAATCCGGTAGGTTTTCCGGCTGATAAATAAGGTTTTCCCCTGATGCTGCCACGCGTGAGCGGTCGTAATCNGCACCGCANCAGCAAGTGTATCTGCCGTGCACTGCAACAACGCTGCTTCGGCCTGGTAATGGCCCGCCGCCTTCCAGCGTTCGACCCAGGCGTTAGGGTCAATGCGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGGTGCACGGGTGAACTGTTCGCGCAGCGGCGTCAGCAGTTGTTTTTTATCGc                                                                                                                                                                                                                           <  1:468361/274‑1 (MQ=255)
                                                                                      aaGGTTTTCCCCTGATGCTGCCACGCGTGAGCGGTCGTAATCAGCACCGCATCAGCAAGTGTATCTGCCGTGCACTGCACCAACGCTGCTTCGGCCTGGTAATGGCCCGCCGCCTTCCAGCGTTCGCCCCAGGCGTTAGGGTCAATGCGGGTCGCTTCACTTACGCCACTGTCGTTATCCAGCGGTGCACGGGTGAACTGATCGCGCACCGCCGTCAGCAGTTGTTTTTTATCGCCAATCCACACCTGGGAAAGCAAGCCGCACTGGCGGTTatc                                                                                                                                                                                   >  2:245701/1‑273 (MQ=255)
                                                                                                                gTGAGGGGTTGTAATCAGCACCGCATCAGCAAGTTTATCTGCCGTGCACTGCAACAACGCTGCTTCGGCCTGGTAATGGCCCGCCGCCTTCCAGCGTTCGACCCAGGCGTTAGGGTCAATGCGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGGTGCACGGGTGAACTGATCGCGCAGCGGCGTCAGCAGTTGTTTTTTATCGCCAATCCACATCTGTGAAAGAAAGCCTGACTGGCGGTTAAATTGCCAACGCTTATTACCCAGCTCGa                                                                                                                                                         <  1:92203/275‑1 (MQ=255)
                                                                                                                                      gCATCAGCAAGTGTATCTGCCGTGCACTGCAACAACGCTGCTTCGGCCTGGTAATGGCCCGCCGCCTTCCAGCGTTCGACCCAGGCGTTAGGGTCAATGCGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGgtg                                                                                                                                                                                                                                                                           >  1:689937‑M2/1‑136 (MQ=255)
                                                                                                                                      gCATCAGCAAGTGTATCTGCCGTGCACTGCAACAACGCTGCTTCGGCCTGGTAATGGCCCGCCGCCTTCCAGCGTTCGACCCAGGCGTTAGGGTCAATGCGGGTCGCTTCACGTACGCCAATGTCGTTATCCAGCGgtg                                                                                                                                                                                                                                                                           >  1:477364‑M2/1‑136 (MQ=255)
                                                                                                                                       cATCAGCAAGTGTATCTGCCGTGCACTGCAACAACGCTGCTTCGGCCTGGTAATGGCCCGCCGCCTTCCAGCGTTCGACCCAGGCGTTAGGGTCAATGCGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGGTGCACGGGTGAACTGATCGCGCAGCGGCGTCAGCAGTTGTTTTTTa                                                                                                                                                                                                                               >  1:636316/1‑182 (MQ=255)
                                                                                                                                           aGCAAGTGTATCTGCCGTGCACTGCAACAACGCTGCTTCGGCCTGGTAATGGCCCGCCGCCTTCCAGCGTTCGACCCAGGCGTTAGGGTCAATGCGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGGTGCACGGGTGAACTGATCGCGCAGCGGCGTCAGCAGTTGTTTTTTATCGc                                                                                                                                                                                                                           <  2:636307/182‑1 (MQ=255)
                                                                                                                                                 tgtATCTGCCGTGCACTGCAACAACGCTGCTTCGGCCTGGTAATGGCCCGCCGCCTTCCAGCGTTCGACCCAGGCGTTAGGGTCAATGCGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGGTGCACGGGTGAACTGATCGCGCAGCGGCGTCAGCAGTTGTTTTTTa                                                                                                                                                                                                                               >  1:696497/1‑172 (MQ=255)
                                                                                                                                                    aTCTGCCGTGCACTGCAACAACGCTGCTTCGGCCTGGTAATGGCCCGCCGCCTTCCAGCGTTCGACCCAGGCGTTAGGGTCAATGCGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGTTGCACTGGTGAACTGATCGCGCAGCGGCGTCAGCAGTTGTTTTTTATCGCCAATCCACATCTGTGAAAGAAAGCCTGACTGGCGGTTAAATTGCCAACGCTTATTACCCAGCTCGATGCAAAAATCCATTTCGCTGGTGGTCAGATGCGGGa                                                                                                                     <  1:642934/275‑1 (MQ=255)
                                                                                                                                                     tCTGCCGTGCACTGCAACAACGCTGCTTCGGCCTGGTAATGGCCCGCCGCCTTCCAGCGTTCGACCCAGGCGTTAGGGTCAATGCGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGGTGCACGGGTGAACTGATCGCGCAGCGGCGTCAGCAGTTGTTTTTTATCGc                                                                                                                                                                                                                           <  2:696488/172‑1 (MQ=255)
                                                                                                                                                           gTGCACTGCAACAACGCTGCTTCGGCCTGGTAATGGCCCGCCGCCTTCCAGCGTTCGACCCAGGCGTTAGGGTCAATGCGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGg                                                                                                                                                                                                                                                                             <  2:466096‑M2/116‑2 (MQ=255)
                                                                                                                                                           gTGCACTGCAACAACGCTGCTTCGGCCTGGTAATGGCCCGCCGCCTTCCAGCGTTCGACCCAGGCGTTAGGGTCAATGCGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGGTGCACGGGTGAACTGATCGCGCAGCGGCGTCAGCAGTTGTTTTTTATCGCCAATCCACATCTGTGACAGAAAGCCTGACTGGCGGTTAAATTGCCAACTCTTATTACCCAGCTCGATGCAAAAATCCATTTCGCTGGTGCGCCGATTCGGGATgtggtg                                                                                                              >  2:642925/1‑270 (MQ=255)
                                                                                                                                                               aCTGCAACAACGCTGCTTCGGCCTGGTAATGGCCCGCCGCCTTCCAGCGTTCGACCCAGGCGTTAGGGTCAATGCGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGgtgca                                                                                                                                                                                                                                                                         >  1:466103‑M2/1‑111 (MQ=255)
                                                                                                                                                                   gaagccacctgcttcggccttGTTATTTCCCGCCGCCTTCCATCGTTCGTCCCAGGCGTTATGGTCACTGCGGGTCGCTTCCCGTACGCCAATTTCGTTATCCCGCGgtgcacggcagatacacttgctgatgcggtgctgattacgaccgctcacgcgtggcagcatcaggggaaaaccttatttatcagccggaaaacctaccggattgatggtagtggtcaaatggcgattaccgttgatgttgaagtggcgagcgatacaccgcatccggc                                                                                                      >  2:296837‑M2/9‑107 (MQ=255)
                                                                                                                                                                   caacaaCGCTGCTTCGGCCTGGTAATGGCCCGCCGCCTTCCAGCGTTCGACCCAGGCGTTAGGGTCAATGCGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGGTGCACGGGTGAACTGATCGCGCAGCGGCGTCAGCAGTTGTTTTTTATCGCCAATCCACATCTGTGAAAGAAAGCCTGACTGGCGGTTAAATTGCCAACGCTTATTACCCAGCTCGATGCAACACACCATTTCGCTGGTGGTCAGATGCGGGATGGGGTgggcctgg                                                                                                       >  2:251359/1‑269 (MQ=255)
                                                                                                                                                                         cGCTGCTTCGGCCTGGTAATGGCCCGCCGCCTTCCAGCGTTCGACCCAGGCGTTAGGGTCAATGCGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGGTGCACGGGTGAACTGATCGCGCAGCGGCGTCAGCAGTTGTTTTTTa                                                                                                                                                                                                                               >  2:378439/1‑148 (MQ=255)
                                                                                                                                                                           ctgctTCGGCCTGGTAATGGCCCGCCGCCTTCCAACGTTCGACCCAGGCGTTAGGGTCAATGCGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGGTGCACGGGTGAACTGATCGCGCAGCGGCGTCAGCAGTTGTTTTTTATCGCCAATCCACATCTGTGAAAGAGAGCCTGACTGGCNGTTAAATTNCCAACGCTTATTACCCAGCTCGATGCAAAAATCCATTTCGCTGGTGGTCAGATGCGGGATGGCGTGGGACGCGGCGGGGAGc                                                                                              >  1:468129/1‑275 (MQ=255)
                                                                                                                                                                             gctTCGGCCTGGTAATGGCCCGCCGCCTTCCAGCGTTCGACCCAGGCGTTAGGGTCAATGCGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGGTGCACGGGTGAACTGATCGCGCAGCGGCGTCAGCAGTTGTTTTTTATCGc                                                                                                                                                                                                                           <  1:378445/148‑1 (MQ=255)
                                                                                                                                                                                      tGGTAATGGCCCGCCGCCTTACAGCGTTCGACCCAGGCGTTAGGGTCAATGCGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGgtgcacggcagatacacttgctgatgcggtgctgattacgaccgctcacgcgtggcagcatcaggggaaaaacttatttatcagccggaaaacctaccggattgatggtagtggtcaaatggcgattactgttgatgttgaagtggcgagcgatacacagcatccggcgcggattggcccggtcact                                                                                   <  1:296843‑M2/275‑188 (MQ=255)
                                                                                                                                                                                       ggTAATGGCCCGCCGCCTTCCAGCTTTCGACCCAGGCGTTAGGGTCAATGCGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGGTGCACGGGTGAACTGATCGCGCAGCGGCGTCAGCAGTTGTTTTTTATCGCCAATCCACATCTGTGAAAGAAAGCCTGACTGGCGGTTAAATTGCCAACGCTTATTACCCAGCTCGATGCAAAAATCCATTTCGCTGGTGGTCAGATGCGGGATGGCGTGGGACGCGGCGGGGAGCGTCACACTGAgg                                                                                  <  1:251364/275‑1 (MQ=255)
                                                                                                                                                                                        gTAATGGCCCGCCGCCTTCCAGCGTTCGACCCAGGCGTTAGGGTCAATGCGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGgtgcacggcagatacacttgctgatgcggt                                                                                                                                                                                                                                                <  1:713693‑M2/116‑31 (MQ=255)
                                                                                                                                                                                        gTAATGGCCCGCCGCCTTCCAGCGTTCGACCCAGGCGTTAGGGTCAATGCGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGgtgcacggcag                                                                                                                                                                                                                                                                   <  2:88160‑M2/97‑12 (MQ=255)
                                                                                                                                                                                            tGGCCCGCCGCCTTCCAGCGTTCGACCCAGGCGTTAGGGTCAATGCGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGgtgcacggcagatacacttgctgatgcggtgctg                                                                                                                                                                                                                                            >  2:713683‑M2/1‑82 (MQ=255)
                                                                                                                                                                                            tGGCCCGCCGCCTTCCAGCGTTCGACCCAGGCGTTAGGGTCAATGCGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGgtgcacggcagatac                                                                                                                                                                                                                                                               >  1:88161‑M2/1‑82 (MQ=255)
                                                                                                                                                                                                   ccgccTTCCAGCGTTCGACCCAGGCGTTAGGGTCAATGCGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGGTGCACGGGTGAACTGATCGCGCAGCGGCGTCAGCAGTTGTTTTTTATCGCCAATCCACATCTGTGAAAGAAAGCCTGACTGGCGGTTAAATTg                                                                                                                                                                                >  1:549823/1‑169 (MQ=255)
                                                                                                                                                                                                      ccTTCCAGCGTTCGAACCAGGCGTTAGGGTCAATGCGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGGTGCACGGGTGAACTGATCGCGCAGCGGCGTCAGCAGTTGTTTTTTATCGCCAATCCACATCTGTGAAAGAAAGCCTGACTGGCGGTTAAATTGCCAACGCTTATTACCCAGCt                                                                                                                                                            <  1:410644/186‑1 (MQ=255)
                                                                                                                                                                                                       cTTCCAGCGTTCGACCCAGGCGTTAGGGTCAATGCGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGGTGCACGGGTGAACTGATCGCGCAGCGGCGTCAGCAGTTGTTTTTTATCGCCAATCCACATCTGTGAAAGAAAGCCTGACTGGCGGTTAAATTGCCaa                                                                                                                                                                            <  2:549814/169‑1 (MQ=255)
                                                                                                                                                                                                                ttCGACCCAGGCGTTAGGGTCAATGCGTGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGgtgcacggcagatacacttgctgatgcggtgctgattacgaccgctcacgcgtggcagcatcaggggaaaaccttatttatcagccggaaaacctaccggattgatggtagtggtcaaatggcgattaccgtt                                                                                                                                         <  1:409791‑M2/195‑134 (MQ=255)
                                                                                                                                                                                                                ttCGACCCAGGCGTTAGGGTCAATGCGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGGTGCACGGGTGAACTGATCGCGCAGCGGCGTCAGCAGTTGTTTTTTa                                                                                                                                                                                                                               >  1:319857/1‑109 (MQ=255)
                                                                                                                                                                                                                    aCCCAGGCGTTAGGGTCAATGCGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGgtgcacggcagatacacttgctgatgcggtgctgattacgaccgctcacgcgtggcagcatcaggggaaaaccttatttatcagccggaaaacctaccggattgatggtagtggtcaaatggcgattaccgttgatg                                                                                                                                     >  2:409784‑M2/1‑58 (MQ=255)
                                                                                                                                                                                                                    aCCCAGGCGTTAGGGTCAATGCGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGGTGCACGGGTGAACTGATCGCGCAGCGGCGTCAGCAGTTGTTTTTTGTCGc                                                                                                                                                                                                                           <  1:49695/109‑1 (MQ=255)
                                                                                                                                                                                                                    aCCCAGGCGTTAGGGTCAATGCGGGTCGCTGCACTTACGCCAATGTCGTTATCCAGCGGTGCACGGGTGAACTGATCGCGCAGCGGCGTCAGCAGTTGTTTTTTATCGc                                                                                                                                                                                                                           <  2:319851/109‑1 (MQ=255)
                                                                                                                                                                                                                                    cAATGCGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGGTGCACGGGTGAACTGATCGCGCAGCGGCGTCAGCAGTTGTTTTTTATCGCCAATCCACATCTGTGAAAGAAAGCCTGACTGGCGGTTAAATTg                                                                                                                                                                                >  1:309935/1‑136 (MQ=255)
                                                                                                                                                                                                                                    cAATGCGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGGTGCACGGGTGAACTGATCGCGCAGCGGCGTCAGCAGTTGTTTTTTATCGCCAATCCACATCTGTGAAAGAAAGCCTGACTGGCGGTTAAATTGCCAACGCTTATTACCCNGCTCGATGCAAAAATCCATTTCGCTGGTGGTCAGATGCGGGATGGCGTGGGACGCGGCGGGGAGCGTCACACTGAGGTTTTCCGCCAGACGCCACTGCTGCCAGGCGCTGATGTGCCCGGCt                                     >  1:595678/1‑275 (MQ=255)
                                                                                                                                                                                                                                     aaTGCGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGGTGCACGGGTGAACTGATCGCGCAGCGGCGt                                                                                                                                                                                                                                               >  2:593046/1‑72 (MQ=255)
                                                                                                                                                                                                                                     aaTGCGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGGTGCACGGGTGAACTGATCGCGCAGCGGCGTCAGCAGTTGTTTTTTATCGCCAATCCACATCTGTGAAAGAAAGCCTGACTGGCGGCTAAATTGCCAACGCTTATCCCACAGCTCGANGCGAAAATCCATTTCGCTGGTGGTCAGATGCGGGATGGCGTGGGACACGGCGGGGAGCGTCCTACTGGGGGTTCCCGCCAGACGCCCCTGCTGCCAGGCGCTGATGGGCCCgggct                                    >  1:647193/1‑272 (MQ=255)
                                                                                                                                                                                                                                        gCGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGGTGCACGGGTGAACTGATCGCGCAGCGGCGTCAGCAGTTGTTTTTTATCGCCAATCCACATCTGTGAAAGAAAGCCTGACTGGCGGTTAAATTGCCaa                                                                                                                                                                            <  2:309929/136‑1 (MQ=255)
                                                                                                                                                                                                                                         cGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGGTGCACGGGTGAACTGATCGCGCAGCGGCGTcagc                                                                                                                                                                                                                                           <  1:593055/72‑1 (MQ=255)
                                                                                                                                                                                                                                            gTCGCTTCACTTACGCCAATGTCGTTATCCAGCGGTGCACGGGTGAACTGATCGCGCAGCGGCGTCAGCAGTTGTTTTTTATCGCCAATCCACATCTGTGAAAGAAAGCCTGACTGGCGGTTAAATTGCCAACGCTTATTACCCAGCTCGATGCAAAAATCCATTTCGCTGTTGGTCAGATGCGGGATGGCGTGGGACGCGGCGGGGAGCGTCACACGGAGGTTTTCCGCCCGACGCCACTGCGGCCAGGCGCTGATGTGCCCGGCTTCtct                                >  2:695352/1‑270 (MQ=255)
                                                                                                                                                                                                                                                 ttCACTTACGCCAATGTCGTTATCCAGCGGTGCACGGGTGAACTGATCGCGCAGCGGCGTCAGCAGTTGTTTTTTATCGCCAATCCACATCTGTGAAAGAAAGCCTGACTGGCGGTTAAATTGCCAACGCTTATTACCCAGCTCGa                                                                                                                                                         >  2:462420/1‑146 (MQ=255)
                                                                                                                                                                                                                                                  tcacgcaCGCCAATGTCTTTATCCAGCTGTACACGGGTTAACTGCTCGCGCAGCGGCGTCAGCAGTTGTTATTTCTCGCCCATCCACTTCTGTGAAAGAAAGCCCGACTGGCGCTTACATTGCCACCGCTTCTTCCCCCGCTCGATGCAGAACTCCATTTCGCTGGTGGTCCGATGCGGGATGGCGTGGGACGCTGCGGGGAGCGTCACACTGAGGTTTTCCGCCAGACGCCACTGCTGCCAGGCGCTGATGTGCCCGGCTTCTGACCATGCgg                        <  2:647184/268‑1 (MQ=255)
                                                                                                                                                                                                                                                  tagattcagCCAGTGTCGTTATCCAGCGGGGCACGGGTGAACTGATCGCGCAGCGGCGTCAGCAGTTGTTTTTTATCGCCAATCCACATCTGTGAAAGAAAGCCTGACTGGCGGTTAAATTGCCAACGCTTATTACCCAGCTCGATGCAAAAATCCATTTCGCTGGTGGTCAGATGCGGGATGGCGTGGGACGCGGCGGGGAGCGTCACACTGAGGTTTTCCGCCAGACGCCACTGCTGCCAGGCGCTGATGTGCCCGGCTTCTGACCATGCgg                        <  2:595669/266‑1 (MQ=255)
                                                                                                                                                                                                                                                     cTTACGCCAATGTCGTTATCCAGCGGTGCACGGGTGAACTGATCGCGCAGCGGCGTCAGCAGTTGTTTTTTATCGCCAATCCACATCTGTGAAAGAAAGCCTGACTGGCGGTTAAATTGCCAACGCTTATTACCCAGCTCGATGCa                                                                                                                                                     <  1:462427/146‑1 (MQ=255)
                                                                                                                                                                                                                                                               tGTCGTTATCCAGCGGTGCACGGGTGAACTGATCGCGCAGCGGCGt                                                                                                                                                                                                                                               >  1:691662/1‑46 (MQ=255)
                                                                                                                                                                                                                                                                   gTTATCCAGCGGTGCACGGGTGAACTGATCGCGCAGCGGCGTcagc                                                                                                                                                                                                                                           <  2:691653/46‑1 (MQ=255)
                                                                                                                                                                                                                                                                    ttATCCAGCGGTGCACGGGTGAACTGATCGCGCAGCGGCGTCAGCAGTTGTTTTTTATCGCCAATCCACATCTGTGAAAGAAAGCCTGACTGGCGGTTAAATTg                                                                                                                                                                                >  2:500442/1‑104 (MQ=255)
                                                                                                                                                                                                                                                                       tCCAGCGGTGCACTGGTGAACTGATCGCGTATCGGCGTCAGCAGTTGTTTTTTATCGCCAATCCACATCTGTGAAAGAAAGCCTGACTGGCGGTTAAATTGCCTACGCTTATTACCCAGCTCGATGCAAAAATCCATTTCGCTGGTGGTCAGATGCGGGATGGCGTGGGACGCGGCGGGGAGCGTCACACTGAGGTTTTCCGCCAGACGCCACTGCTGCCAGGCGCTGATGTGCCCGGCTTCTGACCATGCGGTCGCGTTCGGTTGCACTAcgcg  <  1:348375/275‑1 (MQ=255)
                                                                                                                                                                                                                                                                        ccAGCGGTGCACGGGTGAACTGATCGCGCAGCGGCGTCAGCAGTTGTTTTTTATCGCCAATCCACATCTGTGAAAGAAAGCCTGACTGGCGGTTAAATTGCCaa                                                                                                                                                                            <  1:500449/104‑1 (MQ=255)
                                                                                                                                                                                                                                                                           gCGGTGCACGGGTGAACTGATCGCGCAGCGGCGTCAGCAGTTGTTTTTTATCGCCAATCCACATCTGTGAAAGAAAGCCTGACTGGCGGTTAAATTGCCAACGCTTATTACCCAGCTCGATGCAAAAATCCATTTCGCTGGTGGTCAGATGCGGGATGGCGTGGGACgcgg                                                                                                      >  1:379546/1‑171 (MQ=255)
                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                            
GCGGTGTATCGCTCGCCACTTCAACATCAACGGTAATCGCCATTTGACCACTACCATCAATCCGGTAGGTTTTCCGGCTGATAAATAAGGTTTTCCCCTGATGCTGCCACGCGTGAGCGGTCGTAATCAGCACCGCATCAGCAAGTGTATCTGCCGTGCACTGCAACAACGCTGCTTCGGCCTGGTAATGGCCCGCCGCCTTCCAGCGTTCGACCCAGGCGTTAGGGTCAATGCGGGTCGCTTCACTTACGCCAATGTCGTTATCCAGCGGTGCACGGGTGAACTGATCGCGCAGCGGCGTCAGCAGTTGTTTTTTATCGCCAATCCACATCTGTGAAAGAAAGCCTGACTGGCGGTTAAATTGCCAACGCTTATTACCCAGCTCGATGCAAAAATCCATTTCGCTGGTGGTCAGATGCGGGATGGCGTGGGACGCGGCGGGGAGCGTCACACTGAGGTTTTCCGCCAGACGCCACTGCTGCCAGGCGCTGATGTGCCCGGCTTCTGACCATGCGGTCGCGTTCGGTTGCACTACGCG  >  CP009273/359382‑359919

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.