New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 740668	41 (1.070)	4 (0.110)	4/304	NT	10.3%	coding (48/735 nt)	ybgL	UPF0271 family protein
	?	CP009273	= 740773	30 (0.810)					coding (153/735 nt)	ybgL	UPF0271 family protein

AAATTCCGCTCGGTCAGCCGATTCATTTTGTCCAGTGTTCACTGGAAGAGGCACTAAAAGCACGGCAAGATCAGCAACGTTATTTTGAACAATTAGCGTGGCGGCTGCACAATGAAAATTGACCTGAACGCCGATCTGGGCGAAGGCTGCGCCAGCGACGCAGAGCTATTAACGCTGGTTTCCTCTGCCAATATTGCCTGTGGATTTCATGCAGGCGATGCGCAAATCATGCAGGCTTGCGTGCGTGAAGCAATAAAAAATGGTGTCGCGATTGGCGCTCACCCGAGTTTTCCCGACAGGGAAAATTTTGGTCGCAGCGCCATGCAGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAA  >  CP009273/740510‑741044                                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                                aaaTTCCGTTCGGTCAGTCGATTCATTTTGTCCAGTGTTCACTGGAAGAGGCACTAAAAGCACGGCAAGATCAGCAACGTTATTTTGAACAATTAGCGTGGCGGCTGCACAATGAAAATTGACCTGAACGCCGATCTGGGCGAAGGCTGCGCCAGCGACGCAGAGCTATTAACGCTGGTTTCCTCTGCCAATATTGCCTGTGGATTTCATGCAGGCGATGCGCAAATCATGCAGGCTTGCGTGCGTGAAGCAATAAAAAATGGTGTCGCGATTg                                                                                                                                                                                                                                                                       <  1:6037/274‑1 (MQ=255)   agtCCGCTTGGTCAGCCTATTCAGTTTGTACAGTGGTCACGTGAAGAGGCTCTAAAAGCACCGCAAGATCAGCAACGTTATTTTGAACAATTATCGTGGCGGCTGCACAATGAAAATTGACCTGAACGCCGATCTGGGCGAAGGCTGCGCCAGCGACGCAGAGCTATTAACGCTGGTTTCCTCTGCCAATATTGCCTGTGGATTTCATGCAGGCGATGCGCAAATCATGCAGTCTTTCGTGCGTGAAGCAATAAAAAATGGTGTCGCGATTGgcg                                                                                                                                                                                                                                                                    <  1:36571/273‑1 (MQ=255)     tgccccccttctgCCGAGTAATTTTGTCCAGGGTTCGCTGGAAGAGGCACTAAAAGCACGGCAAGATCAGCAACGTTATGTTGAACAATTCGCGTGGCGGCTGCACAATGAAAAGTGACCTGAACGCCGATCTGGGCGAAGGCTGCGCCAGCGACGCATAGCTATTACCGCTGGTTTCCTCTGCCAATATTGCCTGTGGATTTCATGCAGGCGATGCGCAAATCATGCAGGCTTGCGTGCGTGAAGCAATAAAAAATGGTGTCGCGATTGGCGCt                                                                                                                                                                                                                                                                  <  2:79787/263‑1 (MQ=255)             gTCTGCCGATTCATTTTTTCCAGTGTTCACTTGAAGAGGCACTAAAAGCACGGCAAGATCAGCAACGTTATTTTGAACCATTAGCGTGGCGGCTGCACAATGAAAATTGACCTGAACGCCGATCTGGGCGAAGGCTGCGCCAGCGACGCAGAGCTATTAACGCTGGTTTCCTCTGCCAATATTGCCTGTGGATTTCATGCAGGCGATGCGCAAATCATGCAGGCTTGCGTGCGTGAAGCAATAAAAAATGGTGTCGCGATTGGCGCTCACCCGa                                                                                                                                                                                                                                                           <  1:721425/274‑1 (MQ=255)                      ttCATTTTGTCCAGTGTTCACTGGAAGAGGCACTAAAAGCACGGCAAGATCAGCAACGTTATTTTGAACAATTAGCGTGGCGGCTGCACAATGAAAATTGACCTGAACGCCGATCTGGGCGAAGGCTGCGCCAGCGACGCAGAGCTATTAACGCTGGTTTCCTCTGCCAATATTGCCTGCGGATTTCATTCAGCCGATGCGCAAATAATGCAGGCTTTCGTCGGTGAAACAATAAAAAATGGGGTCGCCATTGGCGCTCACCCGAGTTTTcacca                                                                                                                                                                                                                                                 >  2:654572/1‑271 (MQ=255)                                          cTGGAAGAGGCACTAAAAGCACGGCAAGATCAGCAACGTTATTTTGAACAATTAGCGTGGCGGCTGCACAATGAAAATTGACCTGAACGCCNATCTGGGCGAAGGCTGCGCCAGCGACGCAGAGCTATTAACGCTGGTTTCCTCTGCCAATATTGCCTGTGGATTTCATGCAGGCGATGCGCAAATCATGCAGGCTTGCGTGCGTGAAGCAATAAAAAATGGTGTCGCGATTGGCGCTCACCCGAATTTTCACGACAGGCAAAATTTTGGTCGCa                                                                                                                                                                                                                             <  1:498560/275‑1 (MQ=255)                                                           agaaCGGCAAGATTAGTAACGTTATTTTGAACAATTAGCGTGGAGGCTGCACAATGAAAATTGACCTGAACGCCGATCTGGGCGAAGGCTGCGCGAGCGACGCAGAGCTATTAACGCTGGTTTCCTCTGCCAATATTGCCTGTGGATTTCATGCAGGCGATGCGCAAATCATGCAGGCTTGCGTGCGTGAAGCAATAAAAAATGGTGTCGCGATTGGCGCTCACCCGAGTTTTCCCGACAGGGAAAATTTTGGTCGCAGCGCCATGCAGCTg                                                                                                                                                                                                               <  1:386553/269‑1 (MQ=255)                                                                                ttATTTTGAACAATTAGCGTGGCGGCTGCACAATGAAAATTGACCTGAACGCCGATCTGGGCGAAGGCTGCGCCAGCGACGCAGAGCTATTAACGCTGGTTTCCTCTGCCAATATTGCCTGTGGATTTCATGCAGGCGATGCGCAAATCATGCAGGCTTGCGTGCGTGAAGCAATAAAAAATGGTGTCGCGATTGGCGCTCACCCGAGTTTTCCCGACAGGGAAAATTTTGGTCGCAGCGCCATGCAGCTGCCGCCAGAAACCGTTTACGACCAg                                                                                                                                                                                       >  1:409647/1‑275 (MQ=255)                                                                                        aaCAATTAGCGTGGCGGCTGCACAATGAAAATTGACCTGAACGCCGATCTGGGCGAAGGCTGCGCCAGCGACGCAGAGCTATTAACGCTGGTTTCCTCTGCCAATATTGCCTGTGGATTTCATGCAGGCGATGCGCAAATCATGCAGGCTTGCGTGCGTGAAGCAATAAAAAATGGTGTCGCGATTGGCGCTCACCCGAGTTTTCCCGACa                                                                                                                                                                                                                                               >  1:166744/1‑211 (MQ=255)                                                                                                                 tGAAAATTGACCTGAACGCCGATCTGGGCGAAGGCTGCGCCAGCGACGCAGAGCTATTAACGCTGGTTTCCTCTGCCAATATTGCCTGTGGATTTCATGCAGGCGATGCGCAAATCATGCAGGCTTGCGTGCGTGAAGCAATAAAAAATGGTGTCGCGATTGGCGCTCACCCGAGTTTTc                                                                                                                                                                                                                                                     >  1:684273/1‑180 (MQ=255)                                                                                                                     aaTTGACCTGAACGCCGATCTGGGCGAAGGCTGCGCCAGCGACGCAGAGCTATTAACGCTGGTTTCCTCTGCCAATATTGCCTGTGGATTTCATGCAGGCGATGCGCAAATCATGCAGGCTTGCGTGCGTGAAGCAATAAAAAATGGTGTCGCGATTGGCGCTCACCCGAGTTTTCCCGa                                                                                                                                                                                                                                                 <  2:684264/180‑1 (MQ=255)                                                                                                                            gtgactgaggATGTGGGCTAAGGCTGGGCCAGCGGCGCAGGGCTATTAAGGCTGGTTTCCTCTGCCAATATTGCCTGGGGATTTCATGCAGGCGATGCTCAAATCATGCAGGCTTGCTTGCGTGAAGCAATAAAAAATGGTGTCGCGATTGGCGCTCACCCGAGTTTTCCCGACAGGGAAAATTTTGGTCGCAGCGCCATGCAGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCa                                                                                                                                           <  2:487433/266‑1 (MQ=255)                                                                                                                                                      cgcCAGCGACGCAGAGCTATTAACGCTGGTTTCCTCTGCCAATATTGCCTGTGGATTTCATGCAGGCGATGCGCAAATCATGCAGGCTTGCGTGCGTGAAGCAATAAAAAATGGTGTCGCGATTGGCGCTCACCCGAGTTTTCCCGACAGGGAAAATTTTGGTCGCAGCGCCATGCAGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGTCATGTCAAAc                                                                                                                 >  1:195090/1‑275 (MQ=255)                                                                                                                                                                gCAGTGCTATTAACGCTGGTTTCCTCTGCCAATATTGCCTGTGGATTTCATGCAGGCGATGCGCAAATCATGCAGGCTTGCGTGCGTGAAGCAATACAAAATGGTGTCGCGATTGGCGCTCACCCGAGTTTTCCCGACAGGGAAAATTTTGGTCGCAGCGCCATGCAGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCa                                                                                                        <  1:371299/274‑1 (MQ=255)                                                                                                                                                                              gCTGGTTTCCTCTGCCAATATTGCCTGTGGATTTCATGCAGGCGATGCGCAAATCATGCAGGCTTGCGTGCGTGAAGCAATAAAAAATGGTGTCGCGATTGGCGCTCACCCGAGTTTTCCCGACAGGGAAAATTTTGGTCGCAgcgc                                                                                                                                                                                                                         >  1:472517/1‑147 (MQ=255)                                                                                                                                                                              gCTGGTTTCCTCTGCCAATATTGCCTGTGGATTTCATGCAGGCGATGCGCAAATCATGCAGGCTTGCGTGCGTGAAGCAATAAAAAATGGTGTCGCGATTGGCGCTCACCCGAGTTTTCCCGACAGGGAAAATTTTGGTCGCAGCGCCATGCAGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAg                                                                                          >  1:200335/1‑274 (MQ=255)                                                                                                                                                                                tGGTTTCCTCTGCCAATATTGCCTGTGGATTTCATGCAGGCGATGCGCAAATCATGCAGGCTTGCGTGCGTGAAGCAATAAAAAATGGTgtcgctggcgcagccttcgcccagatcggcgttcaggt                                                                                                                                                                                                                                           <  1:118263‑M2/127‑39 (MQ=255)                                                                                                                                                                                 ggTTTCCTCTGCCAATATTGCCTGTGGATTTCATGCAGGCGATGCGCAAATCATGCAGGCTTGCGTGCGTGAAGCAATAAAAAATGGTGTCGCGATTGGCGCTCACCCGAGTTTTCCCGACAGGGAAAATTTTGGTGGCAGCGCCATGCAGCTGCCGCCAGAAACCGTTTACGCCCa                                                                                                                                                                                        >  1:311007/1‑177 (MQ=255)                                                                                                                                                                                  gTTTCCTCTGCCAATATTGCCTGTGGATTTCATGCAGGCGATGTGCAAATCATGCAGGCTTGCGTGCGTGAAGCAATAAAAAATGGTGTCGCGATTGGCGCTCACCCGAGTTTTCCCGACAGGGAAAATTTTGGTCGCAGCGCCATGCAGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGccc                                                                                                                                                  <  1:440701/214‑1 (MQ=255)                                                                                                                                                                                  gTTTCCTCTGCCAATATTGCCTGTGGATTTCATGCAGGCGATGCGCAAATCATGCAGGCTTGCGTGCGTGAAGCAATAAAAAATGGTGTCGCGATTGGCGCTCACCCGAGTTTTCCCGACAGGGAAAATTTTGGTCGCAGCGCCATg                                                                                                                                                                                                                     <  2:472510/147‑1 (MQ=255)                                                                                                                                                                                    ttCCTCTGCCAATATTGCCTGTGGATTTCATGCAGGCGATGCGCAAATCATGCAGGCTTGCGTGCGTGAAGCAATAAAAAATGGTgtcgctggcgcagccttcgcccagatcggcgttcaggtcaat                                                                                                                                                                                                                                       >  2:118262‑M2/1‑85 (MQ=255)                                                                                                                                                                                     tCCTCTGCCAATATTGCCTGTGGATTTCATGCAGGCGATGCGCAAATCATGCAGGCTTGCGTGCGTGAAGCAATAAAAAATGGTGTCGCGATTGGCGCTCACCCGAGTTTTCCCGACAGGGAAAATTTTGGTCGCAGCGCCATGCAGCTGCCGCCAGAAACCGTTTACGCCCAGACg                                                                                                                                                                                    <  2:311001/177‑1 (MQ=255)                                                                                                                                                                                          tGCCAATATTGCCTGTGGATTTCATGCAGGCGATGCGCAAATCATGCAGGCTTGCGTGCGTGAAGCAATAAAAAATGGTGTCGCGATTGGCGCTCACCCGAGTTTTCCCGACAGGGAAAATTTTGGTCGCAGCGCCATGCAGCTGCCGCCAGAAACCGTTTACGCCCa                                                                                                                                                                                        >  2:708480/1‑168 (MQ=255)                                                                                                                                                                                            ccAATATTGCCTGTGGATTTCATGCCGGCGATGCGCAAATCACTCAGGCTTGCGTGCGTGCACCAATAAAAAATGGTgtcgctggcgcagccttcgcccagatcggcgttcatgtttattttcattgttcagccgctacgataa                                                                                                                                                                                                              <  2:245257‑M2/144‑68 (MQ=255)                                                                                                                                                                                            ccAATATTGCCTGTGGATTTCATGCAGGCGATGCGCAAATCATGCAGGCTTGCGTGCGTGAAGCAATAAAAAATGGTGTCGCGATTGGCGCTCACCCGAGTTTTCCCGACAGGGAAAATTTTGGTCGCAGCGCCATGCAGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTgg                                                                                                                                                                      >  1:101396/1‑184 (MQ=255)                                                                                                                                                                                              aaTATTGCCTGTGGATTTCATGCAGGCTATGCGCAAATCATGCAGGCTTGCGTGCGTGAAGCAATAAAAAATGGTGTCGCGATTGGCGCTCACCCGAGTTTTCCCGACAGGGAAAATTTTGGTCGCAGCGCCATGCAGCTGCCGCCAGAAACCGTTTACGCCCAGACg                                                                                                                                                                                    <  1:708490/168‑1 (MQ=255)                                                                                                                                                                                                tatTGCCTGTGGATTTCATGCAGGCGATGCGCAAATCATGCAGGCTTGCGTGCGTGAAGCAATAAAAAATGGTgtcgctggcgcagccttcgcccagatcggcgttcaggtcaattttcattgtgcagccgccacgctaattgt                                                                                                                                                                                                          >  1:245262‑M2/1‑73 (MQ=255)                                                                                                                                                                                                tatTGCCTGTGGATTTCATGCAGGCGATGCGCAAATCATGCAGGCTTGCGTGCGTGAAGCAATAAAAAATGGTGTCGCGATTGGCGCTCACCCGAGTTTTCCCGACAGGGAAAATTTTGGTCGCAGCGCCATGCAGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGgcgcg                                                                                                                                                                  <  2:101395/184‑1 (MQ=255)                                                                                                                                                                                                      ctttgGATTTCATGCGGGCGATGCGCAAATCATGCGGGCTTCGGTGAGTGAAGCAATAAAAAAGGGTGTCGCGATTGGCGCTCACCCCAGTTTTCCGTACAGGGAAAATTTTGGTCGCAGCGCCATGCAGCTGCCGCCAGAAGCCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGACAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAg                                                                 <  1:366574/272‑1 (MQ=255)                                                                                                                                                                                                         tgGATTTCATGCAGGCGATGCGCAAATCATGCAGGCTTGCGTGCGTGAAGCAATAAAAAATGGTGTCGCGATTGGCGCTCACCCGAGTTTTCCCGACAGGGAAAATTTTGGTCGCAGCGCCATGCAGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGACCGTGCACAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAACAAGCACAACTGGCAGCCg                                                              >  1:722910/1‑275 (MQ=255)                                                                                                                                                                                                               tCATGCAGGCGATGCGCAAATCATGCAGGCTTGCGTGCGTGAAGCAATAAAAAATGGTgtcg                                                                                                                                                                                                                                                                             <  1:253127‑M2/62‑5 (MQ=255)                                                                                                                                                                                                                   ggaGGCGATGCTCAAATCTGGCAGGCTTTCGTGCGTGAAGCAATAAAAAATGGTGTCGCGATTGGCGCTCACCCGAGTTTTCNCGACAGGGNAAATTTTGGTCGCAGCGCCATGCAGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGACGAAAGAAGCACAACTGGCAGACGCCATCGCCag                                                    <  1:472522/273‑1 (MQ=255)                                                                                                                                                                                                                   gCAGGCGATGCGCAAATCATGCAGGCTTGCGTGCGTGAAGCAATAAAAAATGGTGTCGCGAt                                                                                                                                                                                                                                                                         <  2:253122/62‑1 (MQ=255)                                                                                                                                                                                                                    actccgcggcgcAAATCAGGCAGTCTGGCGTGCTGGAAGCAATAAAAAATGGGGTGGCGATTGGCGCTCACCCGAGTTTTCCCGACAGGGAAAATTTTGGTCGCAGCGCCATGCAGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCaga                                                   <  2:200332/267‑1 (MQ=255)                                                                                                                                                                                                                      ggCGATGCGCAAATCATGCAGGCTTGCGTGCGTGAAGCAATAAAAAATGGTGTCGCGATTGGCGCTCACCCGAGTTTTCCCGACAGGGAAAATTTTGGTCGCAGCGCCATGCAGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTATATCAGATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCa                                                                                                             >  1:643735/1‑215 (MQ=255)                                                                                                                                                                                                                                                     gtgAAGCAATAAAAAATGGTGTCGCGATTGGCGCTCACCCGAGTTTTCCCGACAGGGAAAATTTTGGTCGCAGCGCCATGCAGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGTCATGTCaaaa                                                                                                                 >  1:419392/1‑179 (MQ=255)                                                                                                                                                                                                                                                         atcAATAGAAAATGGTGTCACGATTGGCGCTCACCCGAGTTTTCCCGACAGGGAAAATTTTGGTCGCAGCGCCAAGCAGCTGCCGCCAGAAACCGTTTGCGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCa                                                                                                             <  2:419385/178‑1 (MQ=255)                                                                                                                                                                                                                                                                      tctgtCGCGAGTGGCGCTAACCCGAGTTTTCCCGACAGGGAAAATTTTGGTCGCAGCGCCATGCAGCGGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGaa  <  2:195087/272‑1 (MQ=255)                                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                                AAATTCCGCTCGGTCAGCCGATTCATTTTGTCCAGTGTTCACTGGAAGAGGCACTAAAAGCACGGCAAGATCAGCAACGTTATTTTGAACAATTAGCGTGGCGGCTGCACAATGAAAATTGACCTGAACGCCGATCTGGGCGAAGGCTGCGCCAGCGACGCAGAGCTATTAACGCTGGTTTCCTCTGCCAATATTGCCTGTGGATTTCATGCAGGCGATGCGCAAATCATGCAGGCTTGCGTGCGTGAAGCAATAAAAAATGGTGTCGCGATTGGCGCTCACCCGAGTTTTCCCGACAGGGAAAATTTTGGTCGCAGCGCCATGCAGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAA  >  CP009273/740510‑741044

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.