New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	1456346 =	40 (1.040)	14 (0.390)	10/290	NT	28.0%	coding (1197/1206 nt)	paaJ	3‑oxoadipyl‑CoA/3‑oxo‑5,6‑dehydrosuberyl‑CoA thiolase
	?	CP009273	1456480 =	35 (0.990)					coding (99/1314 nt)	paaK	phenylacetyl‑CoA ligase

CCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCACCATGTGCATCGGTGTCGGTCAGGGCATCGCCATGATTCTGGAGCGTGTTTGAGCATATCAACCTGCGAGTACCCTACAATGATAACCAATACAAAGCTTGACCCGATTGAAACCGCGTCTGTTGATGAGTTACAGGCGTTGCAAACACAGCGTCTGAAATGGACGCTCAAACACGCGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCAGCAGGCGTACATCCTGATGATTTCAGGGAAC‑TTTCAGACCTGCGTAAATTTCCCTGTACCACCAAACAGGATCTGCGCGACAACTATCCCTTTGACACCTTTGCCGTGCCAATGGAACAAGTGGTGCGCATTCATGCTTCTTCGGGAACCACAGGTAAACCGACAGTTGTCGGCTATACGCAAAACGATATTGATAACTGGGCCAATATTGTAG  >  CP009273/1456244‑1456733                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                               ccTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCACCATGTGCATCGGTGTCGGTCAGGGCATCGCCATGATTCTGGAGCGTGTTTGAGCATATCAACCTGCGAGTACCCTACAATGATAACCAATACAAAGCTTGACCCGATTGAAACCGCGTCTGTTGATGAGTTACAGGCGTTGCAAACACAGCGTCTGAAATGGACGCTCAAACACGCGTa                                                                                                                                                                                                                                                              <  1:320773/239‑1 (MQ=255)                              aTCGGCGTAACGGTCGTTACGCATTGTGGACCATGTGCATCGGTGTCGGTCAGGGCATCGCCATGATTCTGGAGCGTGTTTGAGCATATCAACCTGCGAGTACCCTACAATGATAACCAATACAAAGCTTGACCCGATTGAAACCGCGTCTGTTGATGAGTTACAGGCGTTGCAAACACAGCGNCTGAAATGGACGCTCAAACACGCGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCAGCAGGCGTACATCCTGATGATTTCAgg                                                                                                                                                                                              >  1:531508/1‑274 (MQ=255)                                  gCGTAACGGTCGTTACGCATTGTGCACCATGTGCATCGGTGTCGGTCAGGGCATCGCCATGATTCTGGAGCGTGTTTGAGCATATCAANCTGCGAGTACCCTACAATGATAACCAATACAAAGCTTGACCCGATTGAAACCGCGTCTGTTGATGAGTTACAGGCGTTGCAAACACAGCGTCTGAAATGGACGCTCAAACACGCGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCAACAGGCGTACATCCTGATGATTTCAGGGa                                                                                                                                                                                            <  1:543574/272‑1 (MQ=255)                                             gtcccGCATTGGGTNCCATGTGTATAGGTGTCGGTCAGGGCATCTCCATGATTCTGGATCGTGTTTGAGCATATCAACCTGCGAGTACCCTACAATGATAACCAATACAAAGCTTGACCCGAGTGAAACCGCGTCTGGTGATGAGTTACAGGCGTTGCAAACACAGCGTCTGAAATGGACGCTCAAACACGCGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCAGCAGGCGTACATCCTGATGATTTCAGGGAAC‑TTTCAGACCTGc                                                                                                                                                                             <  2:531500/271‑1 (MQ=255)                                             gTTACGCATTGTGCACCATGTGCATCGGTGTCGGTCAGGGCATCGCCATGTTTCTGGAGCTTGTTTTAGCATATCAACCTGCNAGTACCCTNAAATGATAACCACTACAAAGCTTGACCCGATTGAAACCGCGTCTGTTGATGAGTTACAGGCGTTGCAAACACAGCGTCTGAAATGGACGCTCAAACACGCGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCAGCAGGCGTTCATCCTGTTGATTTCAGGGAAC‑TTTCAGACCTGc                                                                                                                                                                             <  1:467174/275‑1 (MQ=255)                                                             gcacggcaaaggTGTCGGTCAGGGCATCGCCATGATTCTGGAGCGTGTTTGAGCATATCAACCTGCGAGTACCCTACAATGATAACCAATACAAAGCTTGACCCGATTGAAACCGCGTCTGTTGATGAGTTACAGGCGTTGCAAACACAGCGTCTGAAATGGACGCTCAAACACGCGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCAGCAGGCGTACATc                                                                                                                                                                                                            <  2:297531/219‑1 (MQ=255)                                                                         tgtCGGTCAGGGCATCGCCATGATTCTGGAGCGTGTTTGAGCATATCAACCTGCGAGTACCCTACAATGATAACCAATACAAAGCTTGACCCGATTGAAACCGCGTCTGTTGATGAGTTACAGGCGTTGCAAACACAGCGTCTGAAATGGACGCTCAAACACGCGTATGACAATGTGCCGATGTATCGGCGCAAATTCGACGCCGCAGGCGTACATCCTGATGATTTCAGGGAACTTTTCAGACCTGCGGACATTTCCCTTAACACCCAAACAg                                                                                                                                                   >  2:37837/1‑274 (MQ=255)                                                                         tgtCGGTCAGGGCATCGCCATAAGTCTGGGCCGTGTTTGAGCATATCAACCTGCGAGTACCCTACAATGATAACCAATACAAAGCTTGACCCGATTGAAACCGCGTCTGTTGATGAGTTACAGGCGTTGCAAACACAGCGTCTGAAATGGACGCTCAAACACGCGTATGAAAATGTGCCGATGNATCGGCGCAAATTCGACGCAGCAGGCGTACATCCTGATGATTCCAGGGCAC‑TTTCAGACCTGCGAAAATTTCCCTGTa                                                                                                                                                              >  1:501512/1‑262 (MQ=255)                                                                                                          TGTTTGAGCATATCAACCTGCGAGTACCCTACAATGATAACCAATACAAAGCTTGACCCGATTGAAACCGCGTCTGTTGATGAGTTACAGGCGTTGCAAACACAGCGTCTGAAATGGACGCTCAAACACGCGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCAGCAGGCGTACATCCTGATGATTTCAGGGAAC‑TTTCAGACCTGCGTAAATTTCCCTTTACCACCAAACAGGATCTGCCCGACAACTACCCCTTTGACACCTTTGc                                                                                                                <  2:649499‑M1/275‑1 (MQ=255)                                                                                                                  tccaacccgcTGCGAGTACCCTACAATGATAACCAATACAAAGCTTGACCCGATTGAAACCGCGTCTGTTGATGAGTTACAGGCGTTGCAAACACAGCGTCTGAAATGGACGCTCAAACACGCGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCAGCAGGCGTACATCCTGATGATTTCAGGGAAC‑TTTCAGaa                                                                                                                                                                                 >  2:363030/10‑201 (MQ=255)                                                                                                                     atCAACCTGCGAGTACCCTACAATGATAACCAATACAAAGCTTGACCCGATTGAAACCGCGTCTGTTGATGAGTTACAGGCGTTGCAAACACAGCGTCTGAAATGGACGCTCAAACACGCGTATGAAAATGTGCCGATGTATCGGCGCAAAt                                                                                                                                                                                                                                 >  1:38678/1‑152 (MQ=255)                                                                                                                      acccgcTGCGAGTACCCTACAATGGTAACCAATACAAAGCTTGACCCGATTGAAACCGCGTCTGTTGATGAGTTACAGGCGTTGCAAACACAGCGTCTGAAATGGACGCTCAAACACGCGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCAGCAGGCGTACATCCTGATGATTTCAGGGAAC‑TTTCAGACCTGc                                                                                                                                                                             <  1:363036/197‑1 (MQ=255)                                                                                                                         aCCTGCGAGTACCCTACAATGATAACCAATACAAAGCTTGACCCGATTGAAACCGCGTCTGTTGATGAGTTACAGGCGTTGCAAACACAGCGTCTGAAATGGACGCTCAAACACGCGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGa                                                                                                                                                                                                                             <  2:38678/152‑1 (MQ=255)                                                                                                                          ccTGCGAGTACCCTACAATCATAACCAATACAAAGCTTGACCCGATTGAAACCGCGTCTGTTGATGAGTTACAGGCGTTGCAAACACAGCGTCTGAAATGGACGCTCAAACACGCGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCAGCAGGCGTACATCCTGATGATTTCAGGGAAC‑TTTCAGACCTGCGTAAATTTCCCTGTACCACCAAAAAGGATCTGCGCGACAACTATCCATTTGACACCTTTGCCGTGCCAATGGAACaa                                                                                                >  1:581718/1‑275 (MQ=255)                                                                                                                            agacgctgtgtttgcaacgcctgtaactcatcaacagacgcggtttcaatcgggtcaagctttgtattggttatcattgtagggtactcgcaggttgatatgctcaaacacgcGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGAAGCAGGCGTACATCCTGATGATTTCa                                                                                                                                                                                                >  2:100748‑M2/114‑178 (MQ=255)                                                                                                                             gacgctgtgtttgcaacgcgtgtaactcatcaacagacgcggtttcaatcgggtcaagctttgtattggttatcattgtagggtactcgcaggttgatatgctcaaacacgcGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCAGCAGGCGTACATCCTGATGATTTCAGGGAAC‑TTTCAGACCTGCGTAAATTTCCCTGTACCACCAAACAGGATCTGCGCGACAACTATCCCTTTGACACCTTTGCCGTGCCAATGTAACAAgt                                                                                              >  1:568877‑M2/113‑274 (MQ=255)                                                                                                                                gctgtgtttgcaacgcctgtaactcatcaacagacgcggtttcaatcgggtcaagctttgtattggttatcattgtagggtactcgcaggttgatatgctcaaacacgcGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCAGCAGGCGTACATCCTGATGATTTCAGGGa                                                                                                                                                                                            <  1:100749‑M2/69‑1 (MQ=255)                                                                                                                                 gTACCCTACAATGATAACCAATACAAAGCTTGACCCGATTGAAACCGCGTCTGTTGATGAGTTACAGGCGTTGCAAATACAGCGTCTGAAATGGACGCTCAAACACGCGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCAGCAGGCGTACATCCTGATGATTTCAGGGAAC‑TTTCAGACCTGCGTAAATTTCCCTGTACCACCAAACAGGATCTGCGCGACAACTATCCCTTTGACACCTTTGCCGTGCCAATGTAACAAgtggt                                                                                           <  1:722242/273‑1 (MQ=255)                                                                                                                                                 aCCAATACAAAGCTTGACCCGATTGAAACCGCGTCTGTTGATGAGTTACAGGCGTTGCAAACACAGCGTCTGAAATGGACGCTCAAACACGCGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCAGCAGGCGTACATCCTGATGATTTCAGGGAAC‑TTTCAGACCTGCGTAAATTTCCCTGTACCACCAAACAGGATc                                                                                                                                               >  2:144892/1‑205 (MQ=255)                                                                                                                                                     aTACAAAGCTTGACCCGATTGAAACCGCGTCTGTTGATGAGTTACAGGCGTTGCAAACACAGCGTCTGAAATGGACGCTCAAACACGCGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCAGCAGGCGTACATCCTGATGATTTCAGGGAAC‑TTTCAGACCTGCGTAAATTTCCCTGTACCACCAAACAGGATCTgcg                                                                                                                                           <  1:144893/205‑1 (MQ=255)                                                                                                                                                        cAAAGCTTGACCCGATTGAAACCGCGTCTGTTGATGAGTTACAGGCGTTGCAAACACAGCGTCTGAAATGGACGCTCAAACACGCGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGAc                                                                                                                                                                                                                            >  2:218528/1‑122 (MQ=255)                                                                                                                                                         agcgatggaaaggATTGAAACCGAGTCTGTTGATGAGTTACAGGCGTTGCAAACACAGCGTCTGAAATGGACGCTCAAACACGCGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCAGCAGGCGTACATCCTGATGATTTCAGGGAAC‑TTTCAGACCTGCGTAAATTTCCCTGTACCACCAAACAGGATCTGCGCGACAACTATCCCTTTGACACCTTTGCCGTGCCAATGGAACAAGTGGTGCGCATTCATGCTTCTTCGGGAAc                                                                   <  2:501574/261‑1 (MQ=255)                                                                                                                                                           caacagacgcggtttcaatcgggtcaagctttgtattggttatcattgtagggtactcgcaggttgatatgctcaaacacgcGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACgc                                                                                                                                                                                                                          >  2:489695‑M2/83‑121 (MQ=255)                                                                                                                                                           caacagacgcggtttcaatcgggtcaagctttgtattggttatcattgtagggtactcgcaggttgatatgctcaaacacgcGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCAGCAGGCGTa                                                                                                                                                                                                                >  2:54676‑M2/83‑131 (MQ=255)                                                                                                                                                           caacagacgcggtttcaatcgggtcaagctttgtattggttatcattgtagggtactcgcaggttgatatgctcaaacacgcGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCAGCAGGCGTACATCCTGATGATTTCAGGGAAC‑TTTCAGACCTGCGTAAATTTCCCTGTACCACCAAACAGGATCt                                                                                                                                              >  1:34911‑M2/83‑196 (MQ=255)                                                                                                                                                           caacagacgcggtttcaatcgggtcaagctttgtattggttatcattgtagggtactcgcaggttgatatgctcaaacacgcGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCAGCAGGCGTACATCCTGATGATTTCAGGGAAC‑TTTCAGACCTGCGTAAATTTCCCTGTACCACCAAACAGGATCTg                                                                                                                                             >  2:327038‑M2/83‑197 (MQ=255)                                                                                                                                                           aGCTTGACCCGATTGAAACCGCGTCTGTTGATGAGTTACAGGCGTTGCAAACACAGCGTCTGAAATGGACGCTCAAACACGCGTATGGAAATGTGCCGATGTATCGGCGCAAATTCGACGcagcag                                                                                                                                                                                                                     >  2:29579/1‑126 (MQ=255)                                                                                                                                                            gCTTGACCCGATTGAAACCGCGTCTGTTGATGAGTTACAGGCGTTGCAAACACAGCGTCTGAAATGGACGCTCAAACACGCGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACgcag                                                                                                                                                                                                                        <  1:218533/122‑1 (MQ=255)                                                                                                                                                             acagacgcggtttcaatcgggtcaagctttgtattggttatcattgtagggtactcgcaggttgatatgctcaaacacgcGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGAc                                                                                                                                                                                                                            >  2:601832‑M2/81‑117 (MQ=255)                                                                                                                                                             acagacgcggtttcaatcgggtcaagctttgtattggttatcattgtagggtactcgcaggttgatatgctcaaacacgcGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCAGCAGGCGTACATCCTGATGATTTCAGGGAAC‑TTTCAGACCTGCGTAAATTTCCCTGTACCACCAAACAGGATCTg                                                                                                                                             >  2:582327‑M2/81‑195 (MQ=255)                                                                                                                                                               tGACCCGATTGAAACCGCGTCTGTTGATGAGTTACAGGCGTTGCAAACACAGCGTCTGAAATGGACGCTCAAACACGCGTATGGAAATGTGCCGATGTATCGGCGCAAATTCGACGCAGCAGGCGt                                                                                                                                                                                                                 <  1:29579/126‑1 (MQ=255)                                                                                                                                                               agacgcggtttcaatcgggtcaagctttgtattggttatcattgtagggtactcgcaggttgatatgctcaaacacgcGTATGAAAATGTGGAGATATATCGGCGCAAATTCGACgcagca                                                                                                                                                                                                                      <  1:489702‑M2/43‑1 (MQ=255)                                                                                                                                                               agacgcggtttcaatcgggtcaagctttgtattggttatcattgtagggtactcgcaggttgatatgctcaaacacgcGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCAGCAGGCGTACATc                                                                                                                                                                                                            <  1:54676‑M2/53‑1 (MQ=255)                                                                                                                                                               agacgcggtttcaatcgggtcaagcgttgtattggttatcattgtagggtactcgcaggttgatatgctcaaacacgcGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCAGCAGGCGTACATCCTGATGATTTCAGGGAAC‑TTTCAGACCTGCGTAAATTTCCCTGTACCACCAAACAGGATCTgcgc                                                                                                                                          <  2:34911‑M2/118‑1 (MQ=255)                                                                                                                                                                 acgcggtttcaatcgggtcaagctttgtattggttatcattgtagggtactcgcaggttgatatgctcaaacacgcGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACgcag                                                                                                                                                                                                                        <  1:601841‑M2/41‑1 (MQ=255)                                                                                                                                                                 acgcggtttcaatcgggtcaagctttgtattggttatcattgtagggtactcgcaggttgatatgctcaaacacgcGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCAGCAGGCGTACATCCTGATGATTTCAGGGAAC‑TTTCAGACCTGCGTAAATTTCCCTGTACCACCAAACAGGATCTGcgcg                                                                                                                                         <  1:582336‑M2/119‑1 (MQ=255)                                                                                                                                                                      aTTGAAACCGCGTCTATTGATGAGATACAGGCGTTGCAAACACAGCGTCTGAAATGGACGCTCAAACACGCGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCAGCAGGCGTACATCCTGATGATTTCAGGGAAC‑TTTCAGACCTGCGTAAATTTCCCTGTACCACCAAACAGGATNTGCGCGACAACTATCCCTTTGACACCTTTGCCGTGCCAATGGAACAAGTGGTGCGCATTCATGCTTCTTCGGGAACCACAGGTAAAcctg                                                     >  1:501581/1‑272 (MQ=255)                                                                                                                                                                                cgTCTGTTGATGAGTTACAGGCGTTGCAAACACAGCGTCTGAAATGGACGCTCAAACACGCGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCAGCAGGCGTACATCCTGATGATTTCAGGGAAC‑TTTc                                                                                                                                                                                     >  1:653256/1‑136 (MQ=255)                                                                                                                                                                                cgTCTGTTGAAGAGTTACAGGCGTTGCAAACACAGCGTCTGAAATGGACGCTCAAACACGCGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGAc                                                                                                                                                                                                                            >  1:700127/1‑98 (MQ=255)                                                                                                                                                                                  tCTGTTGATGAGTTACAGGCGTTGCAAACACAGCGTCTGAAATGGACGCTCAAACACGCGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCAGCAGGCGTACATCCTGATGATTTCAGGGAACTTTTCAGACCTGCGTAAATTTCCCTGTACCACCAAACAGGATCTGCGCGACAACTATCCCTTTGACACCGTTGCCGTGCCAATGGAACAAGTGGTGCGCATTCATGCTTCTTCGGGAACCACAGGTAAACCGACAGTTGTCGGCt                                         <  1:37837/275‑1 (MQ=255)                                                                                                                                                                                    tGTTGATGAGTTACAGGCGTTGCAAACACAGCGTCTGAAATGGACGCTCAAACACGCGTATGAAAATGTGCCGATGTATCTGCGCAAATTCGACGCAGCAGGCGTACATCCTGATGATTTCAGGGAAC‑TTTCAGAc                                                                                                                                                                                 <  2:653247/136‑1 (MQ=255)                                                                                                                                                                                    tGTTGATGAGTTACAGGCGTTGCAAACACAGCGTCTGAAATGGACGCTCAAACACGCGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACgcag                                                                                                                                                                                                                        <  2:700118/98‑1 (MQ=255)                                                                                                                                                                                                           atacacAGCNTCTGAAATGGCCCCTCAAACACGTGTATTACACTCTGCAGCTGTATCGGCGCATATTCGACGCAGCAGGCGTACATCCTGATGAGTTCAGGGAAC‑TTTCAGACCTGCGTAAATTTCCCTGTACCACCAAACAGTATCTGCGCGACAACTATCCCTTTGTCACCTTTGCCGTGCCAATGGAACAAGTTGTGCGCATTCATGCTTCTGCGGGAACCACAGGTAAACCGACAGTTGTCGGCTATACGCAAAACGCTATTGATAACTgg               <  2:269289/273‑1 (MQ=255)                                                                                                                                                                                                             acacAGCGTCTGAAATGGACGCTCAAACACGCGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCAGCAGGCGTACATCCTGATGATTTCAGGGAAC‑TTTCAGACCTGCGNAAATTTCCCTGTACCACCAAACAGGATCTGCGCGACAACTATCCCTTTGACACCTTTGCCGTGCCAATGGAACAAGTGGTGCGCATTCATGCTTCTTCGGGAACCACAGGTAAACCGACAGTTGTCGGCTATACGCAAAACGATATTGATAACTGGGc             <  1:649508/275‑1 (MQ=255)                                                                                                                                                                                                              cacaGCGTCTGAAATGGACGCTCAAACACGCGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCAGCAGGCGTACATCCTGATGATTTCAGGGAAC‑TTTCAGACCTGCGTAAATTTCCCTGTACCACCAAACAGGATCTGCGCGACAACTATCCCTTTGACACCTTTGCCGTGCCAATGGAACAAGTGGATCGCATTCATGCTTCTTCGGGAACCACAGGTAAACCGACAGTTGTCGGCTATACGCAAAACGATATTGATAACTGGGcc            >  1:689533/1‑275 (MQ=255)                                                                                                                                                                                                                  gCGTCTGAAATGGACGCTCAAACACGCGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCAGCAGGCGTACATCCTGATGATTTCAGGGAAC‑TTTCAGACCTGCGTAAATTTCCCTGTACCACCAAACAGGATCTGCGCGACAACTATCCCTTTGACACCTTTGCCGTGCCAATGGAACa                                                                                                 >  1:265322/1‑186 (MQ=255)                                                                                                                                                                                                                  gCGTCTGAAATGGACGCTCAAACACGCGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCAGCAGGCGTACATCCTGATGATTTCAGGGAAC‑TTTCAGACCTGCGTAAATTTCCCTGTACCACCAAACAGGATCTGCGCGACAACTATCCCTTTGACACCTTTGCCGTGCCAATGGAACAAGTGGTGCGCATTCATGCTTCTTCGGGACCCACAGGTAACCCGACAGTTGTCGGCTATACGCAAAACGGTATTGAAAACTGGGCCaaca        >  2:223274/1‑273 (MQ=255)                                                                                                                                                                                                                   cGTCTGAAATGGACGCTCAAACACGCGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCAGCAGGCGTACATCCTGATGATTTCAGGGAAC‑TTTc                                                                                                                                                                                     >  2:476570/1‑101 (MQ=255)                                                                                                                                                                                                                      cTGAAATGGACGCTCAAACACGCGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCAGCAGGCGTACATCCTGATGATTTCAGGGAAC‑TTTCAGACCTGCGTAAATTTCCCTGTACCACCAAACAGGATCTGCGCGACAACTATCCCTTTGACACCTTTGCCGTGCCAATGGAACAAgtg                                                                                             <  2:265317/186‑1 (MQ=255)                                                                                                                                                                                                                       tGAAATGGACGCTCAAACACGCGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCAGCAGCCGTACATCCTGATGATTTCAGGGAAC‑TTTCAGAc                                                                                                                                                                                 <  1:476577/101‑1 (MQ=255)                                                                                                                                                                                                                         aaaTGGACGCTCAAACACGCGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCAGCAGGCGTACATCCTGATGATTTCAGGGAAC‑TTTCAGACCTGCGTAAATTTCCCTGTACCACCAAACAGGATCTGCGCGACAACTATCCCTTTGACACCTTTGCCGTGCCAATGGAACAAGTGGTGCGCATTCATGCTTCTTCGGGAACCACAGGTAAACCGACAGTTGTCGGCTATACGCAAAACGATATTGATAACTGGGCCAATATTGTAg  <  1:223279/274‑1 (MQ=255)                                                                                                                                                                                                                                   tcaaacacgcGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCAGCAGGCGTACATCCtgatga                                                                                                                                                                                                     >  2:491143‑M2/11‑70 (MQ=255)                                                                                                                                                                                                                                       acacgcGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCCGCCGGCGTTCATCCTGATGATTTc                                                                                                                                                                                                 <  1:491150‑M2/64‑1 (MQ=255)                                                                                                                                                                                                                                           gcGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCAGCAGGCGTACATCCTGATGATTTCAGGGAAC‑TTTCAGACCTGCGTAAATTTCCCTGTACCACCAAACAGGATCt                                                                                                                                              >  1:472532‑M2/3‑116 (MQ=255)                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                               CCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCACCATGTGCATCGGTGTCGGTCAGGGCATCGCCATGATTCTGGAGCGTGTTTGAGCATATCAACCTGCGAGTACCCTACAATGATAACCAATACAAAGCTTGACCCGATTGAAACCGCGTCTGTTGATGAGTTACAGGCGTTGCAAACACAGCGTCTGAAATGGACGCTCAAACACGCGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCAGCAGGCGTACATCCTGATGATTTCAGGGAAC‑TTTCAGACCTGCGTAAATTTCCCTGTACCACCAAACAGGATCTGCGCGACAACTATCCCTTTGACACCTTTGCCGTGCCAATGGAACAAGTGGTGCGCATTCATGCTTCTTCGGGAACCACAGGTAAACCGACAGTTGTCGGCTATACGCAAAACGATATTGATAACTGGGCCAATATTGTAG  >  CP009273/1456244‑1456733

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.