New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 3164112	36 (0.940)	8 (0.220)	5/296	NT	16.9%	coding (270/1350 nt)	qseC	quorum sensing sensory histidine kinase in two‑component regulatory system with QseB
	?	CP009273	= 3164253	45 (1.240)					coding (411/1350 nt)	qseC	quorum sensing sensory histidine kinase in two‑component regulatory system with QseB

TGCCAAGCGGTTAAGTACGCTCGATCTCAACGAAATCAACGCGGCGGATCGCATGGCACAGACGCCAAATAGATTAAAACACGGTCATGTTGATGACGATGCGCTGACCTTTGCCATCTTTACCCACGACGGCAGAATGGTCCTTAATGATGGCGATAACGGAGAAGATATTCCCTATAGCTATCAACGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGGCTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCACTACGTATGCGTGACCCTGACTCGGAAAAACCACTAAA  >  CP009273/3163995‑3164465                                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                     tGCCAAGCGGTTAAGTACGCTCGATCTCAACGAAATCAACGCGGCGGATCGCATGGCACAGACGCCAAATAGATTAAAACACGGTCATGTTGATGACGATGCGCTGACCTTTGCCATCTTTACCCACGACGGCAGAATGGTCCTTAATGATGGCGATAACGGAGAAGATATTCCCTATAGCTATCAACGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCa                                                                                                                                                                                                      >  1:6466/1‑275 (MQ=255)                tACGCGCGATCTCAACGAAATCAACGCGGCGGATCTCATGGCACAGACGCCAAATAGATTAAAACACGGTCATGTTGATGACGATGCGCTGNCCTTTGCCATCTTTACCCACGACGGCAGAATGGTCCTTAATGATGGCGATAACGGAGAAGATATTCCCTATAGCTATCAACGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAgg                                                                                                                                                                                       <  1:542487/275‑1 (MQ=255)                                                           caGACGCCAAATAGATTAAAACACGGTCATGTTGATGACGATGCGCTGACCTTTGCCATCTTTACCCACGACGGCAGAATGGTCCTTAATGATGGCGATAACGGAGAAGATATTCCCTATAGCTATCAACGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCg                                                                                                                                             <  2:67692/274‑1 (MQ=255)                                                                                     tCATGTTGATGACGATGCGCTGACCTTTGCCATCTTTACCCACGACGGCAGAATGGTCCTTAATGATGGCGATAACGGAGAAGATATTCCCTATAGCTATCAACGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAAGACGATCTTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGGGGTGGGTCGGAc                                                                                                                  >  2:315947/1‑275 (MQ=255)                                                                                                     gcgcTGACCTTTGCCATCTTTACCCACGACGGCAGAATGGTCCTTAATGATGGCGATAACGGAGAAGATATTCCCTATAGCTATCAACGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGGCTGGTCGCACTGCCGATTATGTTaa                                                                                                   <  1:71190/274‑1 (MQ=255)                                                                                                                tGCCATCTTTACCCACGACGGCAGAATGGTCCTTAATGATGGCGATAACGGAGAAGATATTCCCTATAGCTATCAACGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTTTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGGGGCGGGTCGCACTGCCGAGTCGGTTAANTCTCataatg                                                                                        >  2:71189/1‑274 (MQ=255)                                                                                                                tGCCATCTTTACCCACGACGGCAGAATGGTCCTTAATGATGGCGATAACGGAGAAGATATTCCCTATAGCTATCAACGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGGCTGGTCGCACTGCCGATTATGTTAATCATCATGATgg                                                                                       <  1:432904/275‑1 (MQ=255)                                                                                                                 gCCATCTTTACCCACGACGGCAGAATGGTCCTTAATGATGGCGATAACGGAGAAGATATTCCCTATAGCTATCAACGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCgttgt                                                                                                                                                                                               >  1:234464/1‑170 (MQ=255)                                                                                                                 gCCATCGTTACCCACGACGGCAGAATGGACCTTAATGATGGCGATAACGGAGAAGATATTCCCTATAGCTATCAACGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGNAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGGCTGGTCGCACTGCCGATTATGTTAATCATAATAAAGGt                                                                                      >  1:527470/1‑275 (MQ=255)                                                                                                                     tCTTTACCCACGACGGCAGAATGGTCCTTAATGATGGCGATAACGGAGAAGATATTCCCTATAGCTATCAACGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGc                                                                                                                                                                                           <  2:234459/170‑1 (MQ=255)                                                                                                                                ggtgtcataaTGTTCCTTAATAATGGGGATAACGGAGAAGGTGTTCCCTATAGCTATCAAGTGGAAGGTTTTGCTGACGGGGAACTGGTCGGTGAAGACGATCCTTGGCGTTGTGTCTGGATGACCTGACCTGATGGCAAATATCGCCTCGTTGTTGGACAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGGCTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGa                                                                       <  1:229195/267‑1 (MQ=255)                                                                                                                                gacgGCAGAATGGTCCTTAATGATGGCGATAACGGAGAAGATATTCCCTATAGCTATCAACGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGGCTGGTCGCACTGCCGATTATGTTAatcatc                                                                                              >  1:443850/1‑252 (MQ=255)                                                                                                                                 acgGCAGAATGGTCCTTAATGATGGCGATAACGGAGAAGATATTCCCTATAGCTATCAACGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTgatggcaaaggtcagcgcatcgtcatcaacataaccgtgttttaatct                                                                                                                                                                      <  1:550348‑M2/179‑49 (MQ=255)                                                                                                                                 acgGCAGAATGGTCCTTAATGATGGCGATAACGGAGAAGATATTCCCTATAGCTATCAACGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTgatggcaaaggtcagcgcat                                                                                                                                                                                                  <  1:134536‑M2/151‑21 (MQ=255)                                                                                                                                 acgGCAGAATGGTCCTTAATGATGGCGATAACGGAGAAGATATTCCCTATAGCTATCAACGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTgatggcaaaggtcagcgcat                                                                                                                                                                                                  <  2:542316‑M2/151‑21 (MQ=255)                                                                                                                                     cAGAATGGTCCTTAATGATGGCGATAACGGAGAAGATATTCCCTATAGCTATCAACGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTgatggcaaaggtcagcgcatcgtcatcaacatgaccgtgttttaatctattt                                                                                                                                                                  >  2:550339‑M2/1‑127 (MQ=255)                                                                                                                                     cAGAATGGTCCTTAATGATGGCGATAACGGAGAAGATATTCCCTATAGCTATCAACGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTgatggcaaaggtcagcgcatcgtc                                                                                                                                                                                              >  1:542325‑M2/1‑127 (MQ=255)                                                                                                                                     cAGAATGGTCCTTAATGATGGCGATAACGGAGAAGATATTCCCTATAGCTATCAACGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTgatggcaaaggtcagcgcatcgtc                                                                                                                                                                                              >  2:134535‑M2/1‑127 (MQ=255)                                                                                                                                                      atgGCGATAACGGAGAAGATATTCCCTATAGCTATCAACGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGc                                                                                                                                          >  1:284233/1‑186 (MQ=255)                                                                                                                                                          cGATAACGGAGAAGATATTCCCTATAGCTATCAACGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAAtt                                                                                                                                      <  2:284228/186‑1 (MQ=255)                                                                                                                                                                             cccTATAGCTATCAACGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAatat                                                                                                                                                                                                          >  2:388649/1‑99 (MQ=255)                                                                                                                                                                               cTATAGCTATCAACGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGttgttg                                                                                                                                                                                             >  1:704283/1‑110 (MQ=255)                                                                                                                                                                                 ataGCTATCAACGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCa                                                                                                                                                                                                      <  1:388655/99‑1 (MQ=255)                                                                                                                                                                                  taGCTATCAACGGGTAGGTTTTGCTGACGGGAAATTGGTCGGTGAAGACGTTCCTCGGCGTTGTGGCTGGATGCCATCACCTGATGGCACATATCTCATCGTTGTTGGCCAGGAATgg                                                                                                                                                                                  >  1:476054/1‑118 (MQ=255)                                                                                                                                                                                  taGCTATCAACGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGc                                                                                                                                                                                           >  1:113771/1‑109 (MQ=255)                                                                                                                                                                                  taGCTATCAACGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGGCTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCACTACGTATGCGTGACCCt                      >  1:60980/1‑274 (MQ=255)                                                                                                                                                                                   aGCTATCAACGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCa                                                                                                                                                                                         <  2:704273/110‑1 (MQ=255)                                                                                                                                                                                      tATCAAGGGGAAGGTTTTGCTGACGCGCAAATGGTCGGTGTCGACGATCCTTGGCGTTTCGTCTAAATGACCTCACCTCTTGTCGAATATCGCATCGTTGTTGGCCAGGAATGGGAAt                                                                                                                                                                              <  2:476047/118‑1 (MQ=255)                                                                                                                                                                                      tATCAACGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAgg                                                                                                                                                                                       <  2:113770/109‑1 (MQ=255)                                                                                                                                                                                       aTCAACGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAATACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATcc                                                                                                                                 >  1:167015/1‑162 (MQ=255)                                                                                                                                                                                        tCAACGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAatat                                                                                                                                                                                                          >  2:547538/1‑88 (MQ=255)                                                                                                                                                                                        tCAACGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATGTCGCATCGTTGTTGGCCAGGAATGGGAATAcc                                                                                                                                                                           >  2:625337/1‑119 (MQ=255)                                                                                                                                                                                        tCAACGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATc                                                                                                                                                                                                         >  2:548631/1‑89 (MQ=255)                                                                                                                                                                                        tCAACGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCgttgt                                                                                                                                                                                               >  2:700509/1‑99 (MQ=255)                                                                                                                                                                                        tCAACGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGGCTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGGGCTACGTAcgcgctggtcgttatc                 >  2:490026/1‑261 (MQ=255)                                                                                                                                                                                        tCAACGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGGCTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCACTACGAAGGCGTGAACCTGACTCgg               >  1:234270/1‑275 (MQ=255)                                                                                                                                                                                           aCGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAATACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTg                                                                                                                             <  2:167012/162‑1 (MQ=255)                                                                                                                                                                                            cGGGGAGGTTTTGCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATNACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGGCTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAATTCGCGCCACTGAACAAACTGGCGCTGGCa                                        <  1:490033/246‑1 (MQ=255)                                                                                                                                                                                            cGGGAAGGTTTTGCTGGCGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCa                                                                                                                                                                                                      <  1:547547/88‑1 (MQ=255)                                                                                                                                                                                            cGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCAt                                                                                                                                                                                                     <  1:548640/89‑1 (MQ=255)                                                                                                                                                                                            cGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGc                                                                                                                                                                                           <  1:700518/99‑1 (MQ=255)                                                                                                                                                                                                    ttttGCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCgttgt                                                                                                                                                                                               >  2:574207/1‑87 (MQ=255)                                                                                                                                                                                                     tttgtggACGGGCATCTGGGTGGTGAATCCTATCCTTTGTGTTTTGTCTGGTTGACCTACCCTGATGTCAAATATCGCCTCGTTGGTGGCCATGAATGGGAATACCGTGAAGACATGGCGCTGGCGTTTGTTGCCGGGCAATTGATCCCGTGGCTGGTCGCACTGCCGTTTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCACTACGTATGCGTGACCCTGACTCGGAAAAACCACTaaa  <  2:302545/269‑1 (MQ=255)                                                                                                                                                                                                        gCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGc                                                                                                                                                                                           <  1:574216/87‑1 (MQ=255)                                                                                                                                                                                                             cGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGc                                                                                                                                                                                           >  1:475927/1‑82 (MQ=255)                                                                                                                                                                                                                 cAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAgg                                                                                                                                                                                       <  2:475920/82‑1 (MQ=255)                                                                                                                                                                                                                         cGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTgatggcaaagggcagcgcatcgtcatcaacatgaccgtgttttaatctatttggcgtctgtgccatgcgatccgccgcgttgatttcgttgagatcgagcgtacttaaccgcttggcaaacagcatcagttgggtgtc                                                                            <  1:227080‑M2/181‑139 (MQ=255)                                                                                                                                                                                                                         cGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGGCTGGTCGCACttc                                                                                                               >  2:176957/1‑144 (MQ=255)                                                                                                                                                                                                                             gAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTgatggcaaaggtcagcgcatcgtcatcaacatgaccgtgttttaatctatttggcgtctgtgccatgcgatccgccgcgttgatttcgttgagatcgagcgtacttaaccgcttggcaaacagcatcagttgggtgtcgaac                                                                        >  2:227075‑M2/1‑39 (MQ=255)                                                                                                                                                                                                                             gAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGGCTGGTCGCACttcgctg                                                                                                           <  1:176960/146‑7 (MQ=255)                                                                                                                                                                                                                                        ttGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGact                                                                                                                                                                                    >  2:528834/1‑60 (MQ=255)                                                                                                                                                                                                                                            cGTTTTGTCTGGATGACATCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGCATGGGa                                                                                                                                                                                <  1:528842/62‑1 (MQ=255)                                                                                                                                                                                                                                               tttGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCg                                                                                                                                                       >  1:195120/1‑84 (MQ=255)                                                                                                                                                                                                                                               tttGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGGCTGGTCGCACTGCCGATTa                                                                                                         >  1:721935/1‑130 (MQ=255)                                                                                                                                                                                                                                                   tCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGAttg                                                                                                                                                   <  2:195117/84‑1 (MQ=255)                                                                                                                                                                                                                                                   tCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGGCTGGTCGCACTGCCGATTATGtt                                                                                                     <  2:721925/130‑1 (MQ=255)                                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                     TGCCAAGCGGTTAAGTACGCTCGATCTCAACGAAATCAACGCGGCGGATCGCATGGCACAGACGCCAAATAGATTAAAACACGGTCATGTTGATGACGATGCGCTGACCTTTGCCATCTTTACCCACGACGGCAGAATGGTCCTTAATGATGGCGATAACGGAGAAGATATTCCCTATAGCTATCAACGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGGCTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCACTACGTATGCGTGACCCTGACTCGGAAAAACCACTAAA  >  CP009273/3163995‑3164465

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.