New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 3419054	NA (NA)	4 (0.110)	4/298	NT	10.5%	noncoding (1089/2904 nt)	rrlD	23S ribosomal RNA of rrnD operon
	?	CP009273	= 3420250	36 (0.940)					intergenic (‑108/+67)	rrlD/alaU	23S ribosomal RNA of rrnD operon/tRNA‑Ala

TGGATTCAGTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCCTCTGACTGCCAGGGCATCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAGTGAACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAATCACTACAGAGATGGTGGAGCTATGCGGGATCGAACCGCAGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTATAGCCCCATAACATGTAGTTAAAACCTCTTCAAATTTGCCGTGCAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGGGTGCGCTCTAACCACCTGAGCTACAAGCCTGTA  >  CP009273/3419978‑3420514                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                         tGGATTCAGTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCCTCTGACTGCCAGGGCATCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAagaga                                                                                                                                                                                                                                                                        >  2:327314/1‑274 (MQ=14)  ggATTCAGTTAATGATAGTGTGTCGAAACACACTGGGTTTCCGCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGCTTAGCACGTCCTTCATCGCCTCTGACTGCCAGGGCATCCACCGTGTACGCTCAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTTCGAAAATTAAAAAAACCACCAAAAAACTTTCGTTGTTAAGTGTTTCAATTTTCTTCTTGATCCATACTTTTACAGAtca                                                                                                                                                                                                                                                                       <  2:510880‑M2/275‑4 (MQ=255)        gtttAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCTGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCCTCTGACTGCCAGGGCATCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGGGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATCta                                                                                                                                                                                                                                                                 <  2:194156/273‑2 (MQ=11)                  aGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCCTCTGACTGCCAGGGCATCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTCTCACTTCAGAGTTGCGAAACTTTGAGAGACTCACGAACAACTTTAGTTGTTCATTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAAANTCGCAGAGaa                                                                                                                                                                                                                                                        >  2:68408/1‑274 (MQ=255)                    tgtgtCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCCTCTGACTGCCAGGGCATCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGCACATTTGAGAGACTCACGAACAACTTTCGTTGTTCATTGTTTCAATTTTCAGCTTGATCCAGATTTTTACAGAGCAAAACTTCGCAGTTAAc                                                                                                                                                                                                                                                       >  1:185641/1‑273 (MQ=255)                      tgtCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCCTCTGACTGCCAGGGCATCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTCTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAGTGAACCtt                                                                                                                                                                                                                                                    <  1:68409/274‑1 (MQ=38)                            aaccaccggggTTTCCCCAGTCGGAAATCGCCGGTTATCACGGTTCATATCCCCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCCTCTGACTGCCAGGGCATCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAGTGAACCTTTGCAGGt                                                                                                                                                                                                                                             <  2:185638/267‑1 (MQ=255)                            aaCACACTTGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCNCCTCTGACTGCCAGGGCATCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAGTGAACCTTTGCAGGt                                                                                                                                                                                                                                             <  1:530996/275‑1 (MQ=255)                            aaCACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCNTATCGCAGNTTAGCACGTCCTTCATCGCCTCTGACTGCCAGGGCATCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCg                                                                                                                                                                                                                                                               <  1:472724/257‑1 (MQ=18)                                  cTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCCTCTGACTGCCAGGGCATCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGACGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATATTAAAAGAGCAAAACTTCGCAGTGAACCTTGTACGGTACActc                                                                                                                                                                                                                                       >  2:634447/1‑275 (MQ=255)                                               ttCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCCTCTGACTGCCAGGGCATCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCNAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGAAAAACTTCGCAGTAAACCTTTGCAGTTACACTCTGAAGTAttttat                                                                                                                                                                                                                          >  1:615707/1‑273 (MQ=255)                                                      atagacGGTTATCAAGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACTTCCTTCATCGCCTCTGACTGCCAGGGCATCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAGTGAACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAAt                                                                                                                                                                                                                   <  2:615698/270‑1 (MQ=255)                                                      aTCGTCGGTTATAACGTTTCATCTCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCCTCTGACTGCCAGGGCATCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTTCGAAAATTTGAGAGACTCACGAACAACTTTCGTTATTCAGTGTTTCAAGATTCAGCTTGATCCAGATTGTTAAAGTGCATAAGTTCGCAGTGAACGTTGGCGGTTACACTGTGAAGTATTTTCTATTTaag                                                                                                                                                                                                                   <  2:251912/275‑2 (MQ=14)                                                      aTCGCTTGTTATAACGGTTCATAGCACATTACCGACGTTTATCGCAGATTAGCACGGCCTTCATCGCCTCTGAATGCCAGGGCATCCACCGNGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTTACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAGTGAACCTTTGCATGTACACTCTGATGTATTTTTTATTTAAt                                                                                                                                                                                                                   <  1:513018/275‑1 (MQ=14)                                                      aTCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCCTCTGACTGCCAGGGCATCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAGTGAACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAAt                                                                                                                                                                                                                   <  1:327320/275‑1 (MQ=255)                                                                  aaCCGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCCTCGCCTCTGACTGCCATGGCATCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAGTGAACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAATCACTACAgaga                                                                                                                                                                                                        <  2:297601/274‑1 (MQ=255)                                                                        tCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCCTCTGACTGCCAGGGCATCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAGTGAACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAATCACTACAGAGAtggt                                                                                                                                                                                                    >  1:253322/1‑272 (MQ=255)                                                                            atCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCCTCTGACTGCCAGGGCATCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAGTGAACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAATCACTACAGAGATGGTGGAg                                                                                                                                                                                                <  2:253317/272‑1 (MQ=255)                                                                            atCACCTTACCGAAGCTTATCGCAGATTAGCACGTCATTCATCGCCTCTGACTGCCAGGGCAT‑CACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAGTGa                                                                                                                                                                                                                                                         <  1:264880/214‑1 (MQ=255)                                                                                 cTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCCTCTGACTGCCAGGGCATCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGCTGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAATTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCTAGATTTTTAAAGAGTAAAACTTAGccg                                                                                                                                                                                                                                                            >  2:627594/1‑205 (MQ=255)                                                                                    aCCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCCTCTGACTGCCAGGGCATCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCa                                                                                                                                                                                                                                                             >  2:592056/1‑203 (MQ=35)                                                                                     ccGACGCTTATCGCAGATTAGCACGTCCTTCATCGCCTCTGACTGCCAGGGCATGCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAGTGaa                                                                                                                                                                                                                                                        <  1:627603/207‑1 (MQ=38)                                                                                        aCGCTTATCGCAGATTAGCACGTCCTTCATCGCCTCTGACTGCCAGGGCATCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAGTGa                                                                                                                                                                                                                                                         <  1:592065/203‑1 (MQ=38)                                                                                                      ttAGCACGTCCTTCATCGCCTCTGACTGCCAGGGCATCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATATTTAAAGAGCAAAACTTCGNAGTGAACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAATCACTACAGAGATGGTGGAGCTATGCGGGATCGAACCGCAGACCTCCTg                                                                                                                                                                   >  1:540189/1‑275 (MQ=255)                                                                                                                                       gCATCCACCGTGTACTCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTTCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGCTCCAGCTGTTTAAAGAGCAAAACTTCGCAGTGAACCTTTGTAGGTACACTCTGAAGTATTTTTTATTTAATCACTACAGAGATGGTGGAGCTATGCGGGATCGAACCGCAGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCtat                                                                                                                                  <  1:634456/275‑1 (MQ=255)                                                                                                                                          tCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCAAGATTTTTAAAGAGCAAAACTTCGCAGTGAACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAATCACTACAGAGATGGTGGAGCTATGCGGGATCGAACCGCAGACCTCCTGCGTGCAAAGAAGGCGCTCTCCCAGCTGAGCTATAGc                                                                                                                               >  1:37286/1‑275 (MQ=255)                                                                                                                                               cGTGTACGCTTAGTCTCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGCTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAGTGAACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAATCACTACAGAGATGGTGGAGCTATGCGGGATCGAACCGCAGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTATAGCCCCAt                                                                                                                          <  1:379975/275‑1 (MQ=255)                                                                                                                                                gtgtACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAaagcgtaatagctcactggtcgagtcggcctgcgcggaagatgt                                                                                                                                                                                                                              <  1:9722‑M2/174‑45 (MQ=255)                                                                                                                                                    aCGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAaagcgtaatagctcactggtcgagtcggcctgcgcggaagatgtaacg                                                                                                                                                                                                                          >  2:9722‑M2/1‑126 (MQ=255)                                                                                                                                                      gCTTCGTCGCTTTTCCTCACAACCCTAAGATGTTTCACTTCAGAGTTGCGAAAATTTGGGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAGTGAACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAATCACTACAGAGATGGTGGAGCTATGCGGGATCGAACCGCAGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTATAGCCCCATAACATGt                                                                                                                   <  2:37286/275‑1 (MQ=255)                                                                                                                                                         tAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTc                                                                                                                                                                                                                                                                >  2:225251/1‑131 (MQ=37)                                                                                                                                                             cGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAg                                                                                                                                                                                                                                                            <  1:225256/131‑1 (MQ=40)                                                                                                                                                                      tCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCaaa                                                                                                                                                                                                                                                                     >  1:676895/1‑113 (MQ=32)                                                                                                                                                                      tCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAGTGAACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAATCACTACAGAGATGGCGGAGCTATGCGGGATCGAACCGCAGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTATAGCCCCATAACATGTAGTTAAAACCTCTTCa                                                                                                   >  1:358797/1‑275 (MQ=255)                                                                                                                                                                      tCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAACAAAACTTCGCAGTGAACCTTTGCAGGTACACTCTGAAGt                                                                                                                                                                                                                                 >  1:440733/1‑149 (MQ=255)                                                                                                                                                                          aaCCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACtt                                                                                                                                                                                                                                                                 <  2:676886/113‑1 (MQ=37)                                                                                                                                                                          aaCCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAACAAAACTTCGCAGTGAACCTTTGCAGGTACACTCTGAAGTAttt                                                                                                                                                                                                                             <  2:440726/149‑1 (MQ=255)                                                                                                                                                                               gAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTACAGAGCAAAACTTCGCAGTGACCCTTTGCAGGTACACTCTGAAGTATTTTTTATTTACTCATTACCGAGATGGTGGCGCTCTGCGGGATCGAAc                                                                                                                                                                                >  2:192810/1‑189 (MQ=14)                                                                                                                                                                                   aggTTTCACTTCATAGTTGCGAAAATGTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAGTGAACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAATCACTACAGAGATGGTGGAGCTATGCGGGATCGAACCGCa                                                                                                                                                                            <  1:192813/187‑1 (MQ=25)                                                                                                                                                                                                gagTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGc                                                                                                                                                                                                                                                              >  1:636665/1‑94 (MQ=32)                                                                                                                                                                                                                      tCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAaagcgtaatagctcactggtcgagtcggcctgcgcggaagat                                                                                                                                                                                                                                <  2:722445‑M2/102‑43 (MQ=255)                                                                                                                                                                                                                          gAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAaagcgtaatagctcactggtcgagtcggcctgcgcggaagatgtaa                                                                                                                                                                                                                            >  1:722455‑M2/1‑56 (MQ=255)                                                                                                                                                                                                                                                 ttaaaTTTTCAGATTGATCCAGATTTGTAAAGAGCAAAACTTCGCAGTGAACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAATCACTACAGAGATGGTGGAGCTATGCGGGATCGAACCGCAGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTATAGCCCCATAACATGTAGTTAAAACCTCTTCAAATTTGCCGTGCAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGGGTGCGCTCTaa                        <  2:599396/272‑1 (MQ=1)                                                                                                                                                                                                                                                                        gggtgaaagaaagcgtaatagctcgctggtgggggcggcctgcgcggaagatgtgacggggctaaaccatgcaccgaggctgcggcagcgacgcttatgcgttgttgggtaggggagcgttctgtaagcctgcgaaggtgtgctgtgaggcatgctggaggtatcagaagtgcgaatgctgacataagtaacgataaagcgggtgaaaagcccgctcgccggaagaccaagggttcctgtccaacgttaatcggggcagggtgagtcgacccct  >  2:211269‑M2/6‑10 (MQ=255)                                                                                                                                                                                                                                                                          tttAAAGAaagcgtaatagctcactggtcgagtcggcctgcgcggaagatgtaacggggctaaaccatgcaccgaagctgcggcagcgacgcttatg                                                                                                                                                                                 >  2:195906‑M2/1‑8 (MQ=255)                                                                                                                                                                                                                                                                            tAAAGAaagcgtaatagctcactggtcgagtcggcctgcgcggaagatgtaacggggctaaaccatgcaccgaagctgcggcagcgacgcttatgcgttgttgggtaggggagcgttctgtaagcctgcgaaggtgtgctgt                                                                                                                                  >  2:319906‑M2/1‑6 (MQ=255)                                                                                                                                                                                                                                                                              aagaaagcgtaatagctcactggtcgagtcggcctgcgcggaagat                                                                                                                                                                                                                                <  1:678090‑M2/46‑43 (MQ=255)                                                                                                                                                                                                                                                                              aagaaagcgtaatagctcactggtcgagtcggcctgc                                                                                                                                                                                                                                         <  2:323192‑M2/37‑34 (MQ=255)                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                         TGGATTCAGTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCCTCTGACTGCCAGGGCATCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAGTGAACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAATCACTACAGAGATGGTGGAGCTATGCGGGATCGAACCGCAGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTATAGCCCCATAACATGTAGTTAAAACCTCTTCAAATTTGCCGTGCAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGGGTGCGCTCTAACCACCTGAGCTACAAGCCTGTA  >  CP009273/3419978‑3420514

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.