New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 3849876	53 (1.380)	15 (0.410)	7/300	NT	23.5%	coding (102/450 nt)	yidI	inner membrane protein
	?	CP009273	= 3849974	47 (1.280)					coding (200/450 nt)	yidI	inner membrane protein

TTTAGCGGTTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGATATGCTTTTGCCATCCGCTACAAGGAGG‑TCAGATGGGTATCATAGCTCAAAATAAAATCAGTTCATTGGGCATGCTGTTCGGTGCCATCGCTTTAATGATGGGGATTATCCACTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTGGCGGTATGCGTAAGGAAAATCGCTGGGGCATTCGCGGCGCGCT‑GGTTTTTGGCGGCGGGACGCTGGCTTTCCATACCTTGCTTTTTGGTATCGGCATCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGG  >  CP009273/3849702‑3850248                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                                    ttaaaaaatttntnnaagaacttCGTACGCCCGTTTCCTCATATTCTTTTGCCATCCGCTACAAGGAGG‑TAGGATTGGTATCATAGCTCAAAATAAAAGCAGTTCATTGGGCATGCTGTTCGGTGCCATCGCTTTAATGATGGGGATTATCCACTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTgg                                                                                                                                                                                                                                                                                   >  2:566711‑M2/9‑273 (MQ=255)                                        tacaggCTTTTGCCATCCGCTACAAGGAGG‑TCAGGTGGGTATCATAGCTCAAAATAAAATTAATTCATGGGAGATGCTGTTCGGTGCCATCGCTTTCATGATGGGGATTATCCACTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACACAACGGCTGAAATTAAGAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCtcaat                                                                                                                                                                                                                                             <  1:389943/269‑1 (MQ=255)                                            tGCTTTTGCCATCCGTTACAAGGAGG‑TCAGATGGGTATCATAGCTCAAAATAAAATCAGTTCATTGGGCATGCTGTTCGGTGCCATCGCTTNAATGATGGGGATTATCCACTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGCTGTCGATATAATCCTCAATCAAAg                                                                                                                                                                                                                                        <  1:501229/275‑1 (MQ=255)                                            tGCTTTTGCCATCCGCTACAAGGAGG‑TCAGATGGGTATCATAGCTCAAAATAAAATCAGTTCATTGGGCATGCTGTTCGGTGCCATCGCTTTAATGATGGGGATTATCCACTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAg                                                                                                                                                                                                                                        <  1:263486/275‑1 (MQ=255)                                                 ttGCCATCCGCTACAAGGAGG‑TCAGATGGGTATCATAGCTCAAAAAAAAATCAGTTCATTGGGCATGCTGTTCGGTGCCATCGCTTTAATGATGGGGATTATCCACTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGCGGCATTCTCGACGGAATAAAAGGCGAAAAAATTACCACCGAGGAAAAAAAAGAGGACATAGAAGTCGATAAAAAACTAAAAAAAAGCGGtg                                                                                                                                                                                                                                   >  2:724045/1‑274 (MQ=255)                                                   gCCATCCGCTACAAGGAGG‑TCAGATGGGTATCATAGCTCAAAATAAAATCAGTTCATTGGGCATGCTGTTCGGTGCCATCGCTTTAATGATGGGGATTATCGACTTTTCATTCGGCCCTTTCTCCGCACCACGGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAACAGAGGTCTTCTCTCCGGAATAAAAGGAGAAAAAATTAAGACAGAGGAGAAACAAGAGGACGTAGAAGTGNATAAAAGCCACAAGAAAAGcaaaa                                                                                                                                                                                                                                   >  2:464633/1‑269 (MQ=255)                                                        ccGCTACAAGGAGG‑TCAGATGGGTATCATAGCTCAAAATAAAATCAGTTCATTGGGCATGCTGTTCGGTGCCATCGCTTTAATGATGGGGATTATCCACTTTTCATTCGGCCCTTTCTCCACACCACCGCCAACGTTTGAAAGCATCGTGGCGGCCAAAACGGCTGAAATAAAAAGAGCTATTCTCGCCGGAATAAAACGAGAAAAAATCACCACCGGGAAGAAAAAAAACGACTTAGATGACGATAAACTCCTAAAACaaaccttttacttttt                                                                                                                                                                                                                            >  2:389937/1‑262 (MQ=255)                                                         cGCTACAAGGAGG‑TCAGATGGGTATCATAGCTCAAAATAAAATCAGTTCATTGGGCATGCTGTTCGGTGCCATCGCTTTAATGATGGGGATTATCCACTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTGGAGAAAAAAGAGGCCGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTg                                                                                                                                                                                                                           >  2:6012/1‑275 (MQ=255)                                                           cTACAAGGAGG‑TCAGATGGGTATCATAGCTCAAAATAAAATCAGTTCATTGGGCATGCTGTGCGGTGCCATCGCTTTAATGATGGGGATTATCCACTTTTCATTCGGCCCTTTCTCCGACCCACCGCCCACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACAGTGGACAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATAAAAGCGGTATCGCACTg                                                                                                                                                                                                                           >  1:180338/1‑273 (MQ=255)                                                                 ggaggtTCAGATGGGTATAATAGATCAAAATAAAATGAGTTCATTGGGCATGCTGTTCGGTGCCATCGCTTTAATGGTGGGGATTATCCACTTTTCATTCGGCCCTTTCTCCGCACCAACGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATtg                                                                                                                                                                                                                    <  2:598055/275‑1 (MQ=255)                                                                     g‑TCAGATGGGTATCATAGCTCAAAATAAAATCAGTTCATTGGGCATGCTGTTCGGTGCCATCGCTTTAATGATGGGGATTATCCACTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTNAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATtgct                                                                                                                                                                                                                  >  1:598064/1‑272 (MQ=255)                                                                       tCAGATGGGTATCTTAGCTCAAAATTAAATCCTTTCTTTGGGCATGCTGTTCGGTGCCATCGCTTTAATGATGGGGATTATCCACTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTNTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTgcgc                                                                                                                                                                                                              <  1:617316/275‑1 (MQ=255)                                                                          gATGGGTATCATAGCTCAAAATAAAATCAGTTCATTGGGCATGCTGTTCGGTGCCATCGCTTTAATGATGGGGATTATCCACTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGt                                                                                                                                                                                                                                                                                     <  1:136577/201‑1 (MQ=255)                                                                                        cTCAAAATAAAATCAGTTCATTGGGCATGCTGTTCGGTGCCATCGCTTTAATGATGGGGATTATCCACTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTAtt                                                                                                                                                                                             >  1:134538/1‑275 (MQ=255)                                                                                        cTCAAAATAAAATCAGTTCATTGGGCATGCTGTTCGGTGCCATCGCTTTAATGATGGGGATTATCCACTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACAGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTAAATCAAAGCGGTATCGCAATAGCCATTGCTGCGCTACTTTGCGCATTTAtt                                                                                                                                                                                             >  1:176986/1‑275 (MQ=255)                                                                                             aataaaatCTGTTCATTGGTGTTGCTGTTCCGTGCCATCTCTTTAATGATGGGGATTATCCACTTTTCATTCTGCCCTTTCTCCGCACCANCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTCAGCTACTTCGCGCATTTATTGGCg                                                                                                                                                                                         <  1:493984/274‑1 (MQ=255)                                                                                               taatatCAGTTCATTGTGCTTGCTGTTCGGTGCCATCGCTTTAATGATGGGGATTATCCACTTTTCATTCGGCCCTTTATCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTGGCGGt                                                                                                                                                                                       <  1:724055/274‑1 (MQ=255)                                                                                                  aatCAGTTAATTGGGCATGCTGTTCGGTGCCATCGCTTTAATGATGGGGATTATCCACTTTTCATTCGGCCCTTTCTCCGCACCACAGCCAACGTTTGAAAGCAGCGTGGCTGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGCATAAAACGCCAAAAAATTAACACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCATCAATCAAAGCGGTAACGAACTGGACAGTGCTGCGGTCATTTGCGCATTTATTGGCGGtgtg                                                                                                                                                                                    >  2:249918/1‑274 (MQ=255)                                                                                                       gTTCATTGGGCATGCTGTTCGGTGCCATCGCTTTAATGATGGGGATTATCCACTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGTACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTGGAGAAAAAAGAGAACGTAGATGCAGATAAAATCATCAATCAAAGCGGTATAGCACTAGCGATTGCTGCGCTACGTTGCGCAGTAATTGTCGGTAGTCGTaa                                                                                                                                                                               >  2:292856/1‑274 (MQ=255)                                                                                                                                cATCGCTTTAATGATAGGGATTATCCACGGTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTGGAGaaaaa                                                                                                                                                                                                                                                                            >  1:493349/1‑156 (MQ=255)                                                                                                                                    gCTTTAATGATGTGGATTATCCACTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTGGAGAAAAAagag                                                                                                                                                                                                                                                                        <  2:493342/156‑1 (MQ=255)                                                                                                                                              tgGGGATTATCCACTTTTCATTCGGCCCTGTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTANCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTGGCGGTATGCGTAAGGAAAATCGCTGGGGCATTCGCGGCGCGCT‑GGTTTTTggc                                                                                                                                      >  1:488956/1‑275 (MQ=255)                                                                                                                                               ggggATTATCCACTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCTGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTGGAGAAAAAAGAGGACGTATATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGACTTTATTGGCGGTATGCGTAAGGAAACTCGCTGGTNGATTCGCGGCGGGCT‑TGtcattta                                                                                                                                       >  2:463540/1‑267 (MQ=255)                                                                                                                                                gggATTATCCCCTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGACGGAATAAAAGGCGAAAAAATTACCACAGTGGAGAAAAAAGCGGACGTAGATGTCGATAAAATCCTCAATAAAAGCGGTATCGCACTAGACATTGCTGCGCTACTGTGCGCATTTATTGGCGGTATGCGTAAGGAAAATCACAGGGGCATTCGCGGCGCGCG‑GGttgtggggga                                                                                                                                    >  1:173480/1‑267 (MQ=255)                                                                                                                                                gggATTATCCACTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAAGTAAAAGAGGTCTACTCGCCGGAATAAAAGGCGAAAAAATTAACACCGTGGAGAAAAAAGAGGACGTAGCTGTCGATAAAATCATCAATAAAAGCGGTATCGAACTGGCAATTGCTGCGCTACTTTGCGCATTAATTGGCGGTATGCGTAAGGAACATCGCGGGGGACTTCGCGGCGCACt‑tttttttttttt                                                                                                                                    >  2:583090/1‑270 (MQ=255)                                                                                                                                                       tCCACTTATCATTCGGCCCTTTCTCCGCACAACCGCCAACGTTTGAAATCACCGCGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCTTGGAGAAAAAAGCGGAAGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGATCCGATACTTTGCCCATTTATTGCCGGTATGAGTAAGGAAAAACACCGGGGAATTCGCTACGCGCTGGGTNNTTgggtatggg                                                                                                                                >  2:514067/1‑266 (MQ=255)                                                                                                                                                                cATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCTGACAAAACGGCTGAAATTAAAAGAGGTCTTTNCGCCGGAANAAAAGGCGAAAATATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTGGCGGTATGCGTAAGGAAAATCGCTGGGGCATTCGCCGCGCGCT‑AGTTTTTGGCGGCGGGACGCTGGCttt                                                                                                                     <  1:464640/274‑1 (MQ=255)                                                                                                                                                                           ttCTCCGCACTACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTGGAGAAAAAAGAGGACGTGGATGTCGATAAAATCCTAAATCAAAGCGGTAt                                                                                                                                                                                                                                  >  1:717725/1‑155 (MQ=255)                                                                                                                                                                               ccGCACCACCGCCAACGTTTGAAAGCATCGGTGCGGACAAAACGGCTGAAAGTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTGTAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAACGCGGTATCGCa                                                                                                                                                                                                                              <  2:717715/155‑1 (MQ=255)                                                                                                                                                                                    annncGCAAACGTTTAGAAGCATCTTGGTGAAACAAACCGCTGAAATGAAAAGAGGCATTCTCGCAGTAATAAAAGGCGAAAAAATTACCACCGTGGGGAAAAAAGAGGACGTAGATTTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTGGCGGTATGCGTAAGGAAAATCGCTGGGGCATTCGCGGCGCGCT‑GGTTTTTGGCGGCGGGACGCTGGCTTTCCATACCTTGCTTTTTGGTAt                                                                                                <  2:176983/271‑1 (MQ=255)                                                                                                                                                                                        cGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGa                                                                                                                                                                                                                                                          >  2:26798/1‑118 (MQ=255)                                                                                                                                                                                         gCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTGGCGGTATGCGTAAGGAAAATCGCTGGGGCATTCGCGGCGCGCT‑GGTTTTTGGCGGCGGGACGCTGGCTTTCCATACCTTGCTTTTTGGTATCGGCa                                                                                           <  1:6012/275‑1 (MQ=255)                                                                                                                                                                                          ccAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTggagaaaaaagaggacgtagatgtcgataaaatcctcaatcaaagcggtatcgcaccgaacagcatgcccaatgaactgattttattttgagctatgatacccatctgacctccttgtagcggatggcaaaagaatatcaggaaacgggcggacgaaattcttaaacaaaccgcaaaaggtaca                                                                                             <  2:142356‑M2/273‑185 (MQ=255)                                                                                                                                                                                            aaCGTTTGACAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTGGAGAAAAAAGATGACGTAGATGTCGATaaa                                                                                                                                                                                                                                                      <  1:26798/118‑1 (MQ=255)                                                                                                                                                                                            aaCGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTggagaaagggccgaatgaaaagtggataatccccatcattaaagcgatggcaccgaacagcatgcccaatgaactgattttattttgagctatgatacccatctgacatccttgtagcggatggcaaaagcatatcaggaaacgggcggacgaaaatcttaaaaaaaccgcaaaaggaagagcgttag                                                                                         <  1:345415‑M2/275‑189 (MQ=255)                                                                                                                                                                                            aaCGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTggagaaagggccgaatgaaaagtggataatccccatca                                                                                                                                                                                                                                               <  1:168191‑M2/125‑39 (MQ=255)                                                                                                                                                                                               gTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACGGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTgg                                                                                                                                                                                           >  2:605884/1‑174 (MQ=255)                                                                                                                                                                                                tttGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTggagaaagggccgaatgaaaagtggataatccccatcattaa                                                                                                                                                                                                                                           >  2:168188‑M2/1‑83 (MQ=255)                                                                                                                                                                                                   gAAAGCAGCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACGGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTGGCGGt                                                                                                                                                                                       <  1:605893/174‑1 (MQ=255)                                                                                                                                                                                                         aTCGTGGCGGACAAAACGGCTGCAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTg                                                                                                                                                                                                                                                                                    <  2:450188‑M2/75‑2 (MQ=255)                                                                                                                                                                                                             tGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTggaga                                                                                                                                                                                                                                                                                >  1:450195‑M2/1‑70 (MQ=255)                                                                                                                                                                                                                   aCAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTGGAGaaaa                                                                                                                                                                                                                                                                             >  1:349407/1‑72 (MQ=255)                                                                                                                                                                                                                       aaCGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTGGAGAAAAAaga                                                                                                                                                                                                                                                                         <  2:349401/72‑1 (MQ=255)                                                                                                                                                                                                                            cTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTggagaaagggccgaatgaaaagtggataatccccatcattaaagcgatggcaccgaacagc                                                                                                                                                                                                                        <  2:44175‑M2/116‑62 (MQ=255)                                                                                                                                                                                                                            cTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTggagaaagggccgaatgaaaagtggataatccccatca                                                                                                                                                                                                                                               <  1:89727‑M2/93‑39 (MQ=255)                                                                                                                                                                                                                            cTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTggagaaagggccgaatgaaaagtggataatccccatca                                                                                                                                                                                                                                               <  1:233045‑M2/93‑39 (MQ=255)                                                                                                                                                                                                                            cTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTggagaaagggccgaatgaaaagtggataatccccatca                                                                                                                                                                                                                                               <  2:404342‑M2/93‑39 (MQ=255)                                                                                                                                                                                                                            cTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCt                                                                                                                                                                                                             >  1:693084/1‑127 (MQ=255)                                                                                                                                                                                                                            cTGAAAGTAAAAGAGGGCTTCTCGCCGGTATAAAAGGCGAAAAAATTACCACCGTggagaaagggccgaatgaaaagtggataatccccatcattaaagcgat                                                                                                                                                                                                                                     <  1:532507‑M2/103‑49 (MQ=255)                                                                                                                                                                                                                                aaTTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTggagaaagggccgaatgaaaagtggataatccccatcattaaagcgatggcaccgaacagcatgc                                                                                                                                                                                                                    >  1:44175‑M2/1‑51 (MQ=255)                                                                                                                                                                                                                                aaTTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTggagaaagggccgaatgaaaagtggataatccccatcattaa                                                                                                                                                                                                                                           >  2:89726‑M2/1‑51 (MQ=255)                                                                                                                                                                                                                                aaTTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTggagaaagggccgaatgaaaagtggataatccccatcattaa                                                                                                                                                                                                                                           >  2:233040‑M2/1‑51 (MQ=255)                                                                                                                                                                                                                                aaTTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTggagaaagggccgaatgaaaagtggataatccccatcattaa                                                                                                                                                                                                                                           >  1:404349‑M2/1‑51 (MQ=255)                                                                                                                                                                                                                                aaTTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACtt                                                                                                                                                                                                         <  2:693075/127‑1 (MQ=255)                                                                                                                                                                                                                                aaTTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGGggagaaagggccgaatgaaaagtggataatccccatcagtaaagcgatggca                                                                                                                                                                                                                                 >  2:532499‑M2/1‑51 (MQ=255)                                                                                                                                                                                                                                    aaaaGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGcc                                                                                                                                                                                                                        >  1:209781/1‑108 (MQ=255)                                                                                                                                                                                                                                        gagGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATtg                                                                                                                                                                                                                    <  2:209777/108‑1 (MQ=255)                                                                                                                                                                                                                                           gaattaacaaagaaaaaaaaggcgaagaaattAAAACCGTggagaaagggccgaatgaaaagtggataatccccatcattaaagcgatggcaccgaacagcatgcccaatgaactgattttattttgagctatgatacccatctgacctccttgtagcggatggcaaaagcatatcaggaaacgggcggacgaaattcttaaaaaaaccgctaaaggtagagcgttagtgaaattgcaaaggagcaacaatgaaaatttcccgcctcggagaagc                                          >  2:345409‑M2/14‑40 (MQ=255)                                                                                                                                                                                                                                           gTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTg                                                                                                                                                                                                       >  1:388893/1‑118 (MQ=255)                                                                                                                                                                                                                                           gTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTgg                                                                                                                                                                                           >  1:483460/1‑130 (MQ=255)                                                                                                                                                                                                                                           gTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTGGCGGTATGCGTAAGGAAAATCGCTGGGGCATTCGCGGCGCGCT‑GGTTTTTGGCGGCGGGACGCGGGCTTTCCATACCTTGCTTTTTGGTATCGGCATGGTGTGCAGCCTTTTGCGGATATTCCTTATCTTTTTTNTCTTGCCcggc                                         >  2:61748/1‑275 (MQ=255)                                                                                                                                                                                                                                           gTCTTCTCGCAGGAATAAAAGACGAAAAAATTATCTCCGTGGAGAAAAAAGAGTACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCCCTGTCCATTGCTGCGCTACTTTGAGCAATTATAGGCGGTATGCGTAAGGAAAATCGCTGGGTCATTCGCGGCGCGCT‑GGTTTTTGTAGGCGGGAAGCTGGCTTTCGATAACTTGCGTTTTGTTATTGGCATCGGGTGTAGCATGTAGCTGGTCTTCTTTATATTTTCGTTCCTgcctgag                                         >  2:249262/1‑269 (MQ=255)                                                                                                                                                                                                                                               tttcGCCGGAATAAAAGGCGAATAAATTACCACCGTGTATAAAAAAGAGGAAGTAGATGTCGTTAAAATCCTCAATCAAAGCGGTATCGCACTTGCCATTGCTGCGCTTCTTTGCGCATTTATTGGCGGTATGCGTAAGGAATATCGCTGGGGCATTCGCGGCGCGCT‑GGTTTTTGGCGGCGGGACGCTGGCTTTCCATACCTTGCTTTTTGGTATCGGCATCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTGCCTTCCTGACcgg                                          <  1:249267/268‑1 (MQ=255)                                                                                                                                                                                                                                               tctcGCCGGAATAAAAGGCGAAAAAATTACCACCGt                                                                                                                                                                                                                                                                                     <  1:302680/36‑1 (MQ=255)                                                                                                                                                                                                                                               tctcGCCGGAATAAAAGGCGAAAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCa                                                                                                                                                                                                   <  2:388887/118‑1 (MQ=255)                                                                                                                                                                                                                                               tctcGCCGGAATAAAAGGCGAAAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTGGCGGt                                                                                                                                                                                       <  2:483453/130‑1 (MQ=255)                                                                                                                                                                                                                                                ctcGCCGGAATAAAAGGCGAAAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTGGCGGTATGCGTAAGGAAAATCGCTGGGGCATTCGCGGCGCGCT‑GGTTTTTGGCAGCGGGACGCTGGCTTTCCATACCTTGCTTTTTGGTATCGGCATCgtg                                                                                      >  1:389866/1‑225 (MQ=255)                                                                                                                                                                                                                                                 tagCCGGAATAAAAGGCGAAAAAATTACCACCGTTGAGAAAAATGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTNGCCATTGCTGCGCTACGTTGCGCATTTATTGGCGGTATGCGTAAGGAAAATCGCTGGGGCATTCGCGGCGCGCT‑GGTTTTTGGCGGCGGGGCGCTGGCTTTCCATACCTTGCTTTTTGGTATCGGCATCGTGTGCAGCATTTTGCTGATATTCCGTATCTTTTCCTTCCTGACCGGCGGTTCa                                   <  1:514074/273‑1 (MQ=255)                                                                                                                                                                                                                                                        aaTAAAAGGCGAAAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTGGCGGTATGCGTAAGGAAAATCGCTGGGGCATTCGCGGCCCGCT‑GGTTTTTGGAGGCGGGACGCTGGCTTTCCATACCTTGCCTTTTGGTATCGGCAGCGTGTGCAGCATTGTGCTGATATTCCTTATCTTTTTCTTTCTTACTGGCGGTNCCCTggcgt                            >  2:264034/1‑272 (MQ=255)                                                                                                                                                                                                                                                                         ttACCACCGTGGAGAAAAAAGATGACGTAGATGTCTATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTGGCGGTATGCGTAAGGAAAATCGCTGGGGCATTCGCGGCGCGCT‑GGTTTTTGGCGGCGGGACGCTGGCTTTCCATACCTTGCTTTTGGGTATCGGCATCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATg           <  1:61749/275‑1 (MQ=255)                                                                                                                                                                                                                                                                                 gTGGAGAAAACAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTGGCGGTATGCGTAAGGAAAATCGCTGGGGCATTCGCGGCGCGCT‑GGTTTTTGGCGGCGGGACGCTGGCTTTCCATACCTTGCTTTTTGGTATCGGCATCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCgg   >  1:711225/1‑275 (MQ=255)                                                                                                                                                                                                                                                                                  tGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTGGCGGTATGCGTAAGGAAAATCGCTGGGGCATTCGCGGCGCGCT‑GGTTTTTGGCGGCggg                                                                                                                                >  2:715408/1‑149 (MQ=255)                                                                                                                                                                                                                                                                                  tGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTGGCGGTATGCGTAAGGAAAATCGCTGGGGCATTCGCGGCGCGCT‑GGTTTTTGGCGGCGGGACGCTGGCTTTCCATACCTTGCTTTTTGGTATCGGCATCGTGTGCAGCAt                                                                              >  2:32156/1‑199 (MQ=255)                                                                                                                                                                                                                                                                                  tGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTGGCGGTATGCGTAAGGAAAATCGCTGGGGCATTCGCGGCGCGCT‑GGTTTTTGGCGGCGGGACGCTGGCTTTCCATACCTTGCTTTTTGGTATCGGCATCGTGTGCAGCATTTTg                                                                          >  1:73087/1‑203 (MQ=255)                                                                                                                                                                                                                                                                                  tGGAGAAAAAAGAGGACGTAGATGCCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGTGCTACTTTGCGCATTTATTGGCGGTATGCGTAAGGAAAATCGCTGGGGCATTCGCGGCGCGCT‑GGTTTTTGGCGGCGGGACGCTGGCTTTCCATACCTTGCTTTTTGGTATCGGCATCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTTACCGGCTGTTAACTTGTTCACGTAGCCTGATATNTGCCCGCCggc  >  2:53585/1‑274 (MQ=255)                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                                    TTTAGCGGTTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGATATGCTTTTGCCATCCGCTACAAGGAGG‑TCAGATGGGTATCATAGCTCAAAATAAAATCAGTTCATTGGGCATGCTGTTCGGTGCCATCGCTTTAATGATGGGGATTATCCACTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTGGCGGTATGCGTAAGGAAAATCGCTGGGGCATTCGCGGCGCGCT‑GGTTTTTGGCGGCGGGACGCTGGCTTTCCATACCTTGCTTTTTGGTATCGGCATCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGG  >  CP009273/3849702‑3850248

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.