New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	4154285 =	42 (1.090)	7 (0.200)	6/292	NT	17.3%	coding (719/1845 nt)	btuB	vitamin B12/cobalamin outer membrane transporter
	?	CP009273	4154443 =	28 (0.780)					coding (877/1845 nt)	btuB	vitamin B12/cobalamin outer membrane transporter

TGGTAATACCGGAACGCAAGCGCAGACAGATAACGATGGTTTTTTAAGTAAAACGCTTTATGGCGCGCTGGAGCATAACTTTACTGATGCCTGGAGCGGCTTTGTGCGCGGCTATGGCTATGATAACCGTACCAATTATGACGCGTATTATTCTCCCGGTTCACCGTTGCTCGATACCCGTAAACTCTATAGCCAAAGTTGGGACGCCGGGCTGCGCTATAACGGCGAACTGATTAAATCACAACTCATTACCAGCTATAGCCATAGCAAAGATTACAACTACGATCCCCATTATGGTCGTTATGATTCGTCGGCGACGCTCGATGAGATGAAGCAATACACCGTCCAGTGGGCAAACAATGTCATCGTTGGTCACGGTAGTATTGGTGCGGGTGTCGACTGGCAGAAACAGACTACGACGCCGGGTACAGGTTATGTTGAGGATGGATATGATCAACGTAATACCGGCA  >  CP009273/4154175‑4154644                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                          tGGGAATACCGGAAGGAAAGAGAAAGAAGAGAACGATTGTTTTTTAAGGAAGACGATTTATGGCGCGCGTGAGCATGACTTTACTGATGCCTGTAGCGGCTTTGTGCGCGGCTATGGCTATGATAACCGTACCAATTATGACGCGTATTATTCTCCCGGTTCACCGTTGCTCGATACCCGTAAACTCTATAGCCAAAGTTGGGACGCCGGGCTGCGCTATAACGGCGAACTGATTAAATCACAACTCATTACCAGCTATAGCCATAGCAAAGAt                                                                                                                                                                                                      <  2:205601/274‑1 (MQ=255)       tACCGGAACGAAAGCGCAGACAGATAACGATGGTTTTTTAAGTAAAACGCTTTATGGCGCGCTGGAGCATAACTTTACTGATGCCTGGAGCGGCTTTGTGCGCGGCTATGGCTATGATAACCGTACCAATTATGACGCGTATTATTCTCCCGGTTCACCGTTGCTCGATACCCGTAAACTCTATAGCCAAAGTTGAGACGCCGGGCTGCGCTATAACGGCGAACTGATTAAATCACAACTCATTACCAGCTATAGCCATAGCAAAGATTACAAca                                                                                                                                                                                               >  1:701849/1‑274 (MQ=255)            gAACGCAAGCGCAGACAGATACCGATGGTTTTTTAAGTAAAACGCTTTATGGCCCGCTGGATCATAACTTTACTGATGCCTGGAGCGGCTTTGTGCGCGGCTATGGCTATGATAACCGTACCAATTATGACGCGTATTATTCTCCCGGTTCACCGTTGCTCGATACCCGTAAACTCTATAGCCAAAGTTGGGACGCCGGGCTGCGCTATAACGGCGAACTGATTAAATCACAACTCATTACCAGCTATAGCCATAGCAAAGATTACAACTACGa                                                                                                                                                                                           <  1:79301/274‑1 (MQ=255)                                                  aaaaAGATTTATGGGGAGATGTAGATTGACTTTACTGATGCCTGTAGCGTCTTTTTGCGCGGCTATTGCTATGATAACCGTACCAATTATGACGCGTATTATTCTCCCGGTTCACCGTTGCTCGATACCCGTAAACTCTATAGCCAAAGTTGGGACGCCGGGCTGCGCTATAACGGCGAACTGATTAAATCACAACTCATTACCAGCTATGGCCATAGCAAAGATTACAACTACGATCCCCATTATGGTCGTTATGATTCGTCGGCGACGCTCga                                                                                                                                                    <  2:548028/275‑1 (MQ=255)                                                                                 ttACTGATGCCTGGAGCGGCTTTGTGCGCGGCTATGGCTATGATAACCGTACCAATTATGACGCGTATTATTCTCCCGGTTCACCGTTGCTNGATACCCGTAAACTCTATAGCCAAAGTTGGGACGCCGGGCTGCGCTATAACGGCGAACTGATTAAATCACAACTCATTACCAGCTATAGCCATAGCAAAGATTACAACTACGATCCCCATTATGGTCGTTATGATTCGTCGGCGACGCTCGATGTGATGAAGCAATACACCGTCCAGTGGGCa                                                                                                                     <  1:522986/275‑1 (MQ=255)                                                                                                                         TGATAACCGTACCAATTATGACGCGTATTATTCTCCCGGTTCACCGTTGCTCGATACCCGTAAACTCTATAGCCAAAGTTGGGACGCCGGGCTGCGCTATAACGGCGAACTGATTAAATCACAACTCATTACCAGCTATAGCCATAGCAAAGATTACAACTACGATCCCCATTCTGGTCGTTATGATTCATCGGCGACGCTCGATGAGATGAAGCAATACACCGTCCAGTGGGCAAACAATGTCATCGTTGGTCACGGTATTATTTGTGCGGgtg                                                                             <  1:237013‑M1/275‑1 (MQ=255)                                                                                                                         TGATAACCATACCAATTATTACGCGTATTATTCTCCCGGGTCACCGTTGCTCGATACCCGTAAACTCGATAGCCAAAGGTGGGACGACGGGCTGCGCTATAACGGCGAACTGATTAAATCAGAACTCATTACCAGCTATAGCCATAGCAAAGATTACAACTACGATCCCCATTATGGTCGTTATGATTCGTCGGCGACGCTCGATGAGATGAAGCAATACAACGTCCGGTGGGCAAACAATGTCATCGTTGGTCACGGTAGTAATGGTGCGGgtg                                                                             >  2:237008‑M1/1‑275 (MQ=255)                                                                                                                          gATAACCGTACCAATTATGACGCGTATTATTCTCCCGGTTCACCGTTGCTCGATACCCGTAAACTCTATAGCCAAAGTTGGGACGCCGGGCTGCGCTATAACGGCGAACTGATTAAATCACAACTCATTACCAGCTATAGCCATAGCAAAGATTACAACTAc                                                                                                                                                                                             >  1:655207/1‑162 (MQ=255)                                                                                                                             tggtaatgagtgtgtatttaagcagttcgccgttatagcgcagcccggcgtcccaactttggctatagagttgacgggtatcgagcaacggtgaaccgggagaataatacgcgtcataattggtacggttatcatagccatagcAAAGATTACAACTACGATCCCCATTATGGTCGTTAGGATTCGTCGGCGACGCTCGATGAGATGAAGCAATACACCGTCCAGTGGGCAAACAATGTCATCGTTGGTCACGGTAGTATTGGTGCGGGTGTCGa                                                                         <  2:283275‑M2/131‑1 (MQ=255)                                                                                                                              aCCGTACCAATTATGACGCGTATTATTCTCCCGGTTCACCGTTGCTCGATACCCGTAAACTCTATAGCCAAAGTTGGGACGCCGGGCTGCGCTATAACGGCGAACTGATTAAATCACAACTCATTACCAGCTATAGCCATAGCAAAGATTACAACTACGATc                                                                                                                                                                                         <  2:655198/162‑1 (MQ=255)                                                                                                                               ccGTACCAATTATGACGCGTATTATTCTCCCGGTTCACCGTTGCTCGATACCCGTAAACTCTATAGCCAAAGTTGGGACGCCGGGCTGCGCTATAACGGCGAACTGATTAAATCACAACTCATTACCAGCTATAGCCATAGCAAAGATTACAACTACGATCCCCATTATGGTCGTTATGATTCGTCGGCGACGCTCGATGAGATGAAAAAAAACACCGTCCAGTGGACAAACAATGTCATAGt                                                                                                       >  1:311642/1‑243 (MQ=255)                                                                                                                                   tgagttgtgatttaatcagttcgccgttatagcgcagcccggcgtcccaactttggctatagagtttacgggtatcgagcaacggtgaaccgggagaataatacgcgtcataattggtacggttatcatcgccatagcAAAGATTACAACTACGATCCCCATTATGGTCGTTATGATTCGTCGGCTACGCTCGATGAGATGAAGCAATACACCGTCCAGTGGGCAAACAATGTCATCGTTGGTCACGGTAGTATTGGTGCGGATGTCGACTGGc                                                                    >  1:243253‑M2/139‑274 (MQ=255)                                                                                                                                   tgagttgtgatttaatcagttcgccgttatagcgcagcccggcgtcccaactttggctatagagtttacgggtatcgagcaacggtgaaccgggagaataatacgcgtcataattggtacggttatcatagccatagcAAAGATTACAACTACGATCCCCATTATGGTCGTTATGATTCGTCGGCGACGCTCGATGAGATGAAGCAATACACCGTCCAGTGGGCAAACAATGTCATCGTTGGTCACGGTAGTATTGGTTCGGgtg                                                                             >  1:283280‑M2/139‑265 (MQ=255)                                                                                                                                                         gccgttaagccgcatcccggcgtccccactttgactatagagtttacgggtatcgatcaacgttgaaccggtagaataatacgcgtcatacttggtacggttatcatagccatagcAAAGATTACAACTACGATCCCCTTTATGGGCGTTATGATTCGTCGGCGACGCTCGATGAGATGAAGCAATACACCGTCCAGTGGGCAAACAATGTCATCGTTGGTCACGGTAGTATTGGTGCGGGTGTCGACTGGCAGAAACAGACTGCGACGCCGGGt                                             <  2:243248‑M2/159‑1 (MQ=255)                                                                                                                                                                   aCCGTTGCTCGATACCCGTAAACTCTATAGCCNAAGTTGGGACGCCGGGCTGTGCTATAACGGCGAACTGATTAAATCACAACTCATTACCAGCTATAGCCATAGCAAAGATTACAACTACGATCCCCATTATGGTCGTTATGATTCGTCGGCGACGCTCGATGAGATGAAGCAATACACCGTCCAGTGGGCAAACAATGTCATCGTTGGTCACgg                                                                                              <  1:544091/216‑1 (MQ=255)                                                                                                                                                                     atgtGCCCGAAACCCGTAAACTCTAGAGCCAAAGTGGGGACGCCGGGCTGCGCTATAACGGCGAACTGATTAAATCACAACTCATTAACAGCTATAGCCATAGCAAAGATTACAACTACGATCCCCATTATGGCCGTTATGATTCGTCGGCGACGCTCGATGAGATGAAGCAATACACCGTCCAGTGGGCAAACAATGTCATCGTTGGTCACGGTAGTATTGGTGCGGGTGTCGACTGGCAGAAACAGACTACGACGCCGGGTACAGGTTATGtt                                 <  2:701840/272‑1 (MQ=255)                                                                                                                                                                          cttgagaCCCGTAAACTCTATAGCCAAAGTTGGGACGCTGGGCTGCGCTATAACGGCGAACTGATTAAATCACACATCATTACCAGCTATAGCCATATCAAAGATTACAACTACGATCCCCATTATGGTCGTTATGATTCGTCGGCGACGCTCGATGAGATGAAGCAATACACCGTCCAGTGGGCAAACAATGTCATCGTTGGTCACGGTAGTATTGGTGCGGGTGTCGACTGGCAGAAACAGACTACGACGCCGGGTACAGGTTATGTTGAgga                            <  1:382870/269‑1 (MQ=255)                                                                                                                                                                          cTCGATACCCGTAAACTCTATAGCCAAAGTTGGGACGCCGGGCTGCGCTATAACGGCGAACTGATTAAATCACAACTCATTACCAGCTATAGCCATAGCAAAGATTACAACTACGATCCCCACTATGGTCGTTATGATTCGTCGGCGACGCTCGATGAGATGAAGCAATACACCGTCCAGTGGGCAAACAATGTCATCGTTGGTCACGGTAGTATTGGTGCGGGTGTCGACTGGCAGAAACAGACTACGACGCCGGGTACAGGTTATGTTGAgga                            <  1:621910/275‑1 (MQ=255)                                                                                                                                                                               tACCCGTAAACTCTATAGCCAAAGTTGGGACGCCGGGCTGCGCTATAACGGCGAACTGATTAAATCACAACTCATTACCAGCTATAGCCATAGCAAAGATTACAACTACGATCCCCATTATGGTCGTTATGATTCGTCGGCGACGCTCGATGAGATGAAGCAATACACCGTCCAGTGGGCAAACAATGTCATCGTTgg                                                                                                    >  1:60435/1‑198 (MQ=255)                                                                                                                                                                                   cGTAAACTCTATAGCCAAAGTTGGGACGCCGGGCTGCGCTATAACGGCGAACTGATTAAATCACAACTCATTACCAGCTATAGCCATAGCAAAGATTACAACTACGATCCCCATTATGGTCGTTATGATTCGTCGGCGACGCTCGATGAGATGAAGCAATACACCGTCCAGTGGGCAAACAATGTCATCGTTGGTCAc                                                                                                <  2:60434/198‑1 (MQ=255)                                                                                                                                                                                      aacatctACAGCCAAATTTGGGACGCCGCGCTGCTCTATAACGGCGAACTGATTAAAGCACAACTCATTACCAGCTATAGCCATAACCAATAGTACCAACACGATCCCCATTGTGGGCGTTATGAGATGGCGACGACGCACGGTGAGAGGAAGCAATCCACCGTCCAGGGGACAAAAAATGTCATCGTTGGTCACGGCAGTATTGGTGCGGGTGTCGACTGGCAGAAACAGACTACGACGCCGGGTACAGGTTATGTTGAGGATGGATATGATc                 <  2:237396/270‑1 (MQ=255)                                                                                                                                                                                         ctctATAGCCAAAGTGGGGACGCCGGGCTTCGCTATAACGGCGAACTGATTAAATCACAACTCATTACCAGCTATAGCCATAGCAAAGATTACAACTACGATCCCCATTATGGTCGTTATGATTCGTCGGCGACGCTCGATGAGATGAAGCAATACACCGt                                                                                                                               >  1:509011/1‑161 (MQ=255)                                                                                                                                                                                            tataGCCAAAGTTGGGACGCCGGGCTGCGCTATAACGGCGAACTGATTAAATCACAACTCATTACCAGCTATAGCCATAGCAAAGATTACAACTACGATCCCCATTATGGTCGTTATGATTCGTCGGCGACGCTCgatga                                                                                                                                                 >  1:643960/1‑140 (MQ=255)                                                                                                                                                                                             ataGCCAAAGATGGGACGCCGCGCTGCGCTATAACGGTGAACTGATTAAATCACAACTCATTACTAGTGATAGCCATAGCAAAGATTACAACGACGTTCCCCATTATGGTCGTTATGATTCGTCGGCGACGCTCGATGAGATGCAGCAATACACCGTACAg                                                                                                                           <  2:509004/161‑1 (MQ=255)                                                                                                                                                                                                gagtttacgggtatcgagcaacggtgaaccgggagaataatacgcgtcataattggtacggttatcatagccatagcAAAGATTACAACTACGATCCCCATTATGGTCGTTATGATTCGTCGGCGACGCTCGATGAGATGAAGCAATACACCGTCCAGTGGGCAAACAATGTCATCGTTGGTCACGGTCGTATTGGTGCGGGTGTCGACTGGCAGAAACAGACTACGACGACGGGTACAGGATATGTTGAGGATGGata                      >  1:352807‑M2/78‑259 (MQ=255)                                                                                                                                                                                                gCCAAAGTTGGGACGCCGGGCTGCGCTATAACGGCGAACTGATTAAATCACAACTCATTACCAGCTATAGCCATAGCAAAGATTACAACTACGATCCCCATTATGGTCGTTATGATTCGTCGGCGACGCTCgatgagatg                                                                                                                                             <  2:643951/140‑1 (MQ=255)                                                                                                                                                                                                    aaGTTGGGACGCCGGGCTGCGCTATAACGGCGAACTGATTAAATCACAACTCATTACCAGCTATAGCCATAGCAAAGATTACAACTACGATCCCCATTATGGTCGTTATGATTCGTCGGCGACGCTCGATGAGATGAAGCAATACACCGTCCAGTGGGCAAACa                                                                                                                 >  1:541404/1‑164 (MQ=255)                                                                                                                                                                                                    aaGTTGGGACGCCGGGCTGCGCTATAACGGCGAACTGATTAAATCACAACTCATTACCAGCTATAGCCATAGCAAAGATTACAACTACGATCCCCATTATGGTCGTTATGATTCGTCGGCGACGCTCGATGAGATGAAGCAATACACCGTCCAGTGGGCAAACAATGTCATCGTTGGTCACGGTAGTATTGGTGCGGGTGTCGACTGGCATAAACAGAATACGAATCCCGTTACCGGGGATGTTGAGTATTTATTTTATTCACATAATAcctttc  >  2:390738/1‑271 (MQ=255)                                                                                                                                                                                                        tGGGACGCCGGGCTGCGCTATAACGGCGAACTGATTAAATCACAACTCATTACCAGCTATAGCCATAGCAAAGATTACAACTACGATCCCCATTATGGTCGTTATGATTCGTCGGCGACGCTCGATGAGATGAAGCAATACACCGTCCAGTGGGCAAACAATGt                                                                                                             <  2:541395/164‑1 (MQ=255)                                                                                                                                                                                                                               cGGCGAACTGATTAAATCACAACTCATTACCAGCTATAGCCATAGCAAAGATTACAACTACGATCCCCATTATGGTCGTTATGATTCGTCGGCGACGCTCGATGAGATGAAGCAATACACCGTCCAGTGGGCAAACAATGTCATCGTTgg                                                                                                    >  2:672317/1‑150 (MQ=255)                                                                                                                                                                                                                                   gAACTGATTAAATCACAACTCATTACCAGCTATAGCCATAGCAAAGATTACAACTACGATCCCCATTATGGTCGTTATGATTCGTCGGCGACGCTCGATGAGTTGAAGCAATACACCGTCCAGTGGGCAAACAATGTCATCGTTGGTCAc                                                                                                <  1:672326/150‑1 (MQ=255)                                                                                                                                                                                                                                    aaCTGATTAAATCACAACTCATTACCAGCTATAGCCATAGCAAAGATTACAACTACGATCCCCATTATGGTCGTTATGATTCGTCGGCGACGCTCgatgagatga                                                                                                                                            >  2:376803/1‑105 (MQ=255)                                                                                                                                                                                                                                      cTGATTAAATCACAACTCATTACCAGCTATAGCCATAGCAAAGATTACAACTACGATCCCCATTATGGTCGTTATGATTCGTCGGCGACGCTCGATGAGATGAAGCaa                                                                                                                                       >  1:31434/1‑108 (MQ=255)                                                                                                                                                                                                                                        gATTAAATCACAACTCATTACCAGCTATAGCCATAGCAAAGATTACAACTACGATCCCCATTATGGTCGTTATGATTCGTCGGCGACGCTCGATGAGATGAAGCa                                                                                                                                        <  1:376809/105‑1 (MQ=255)                                                                                                                                                                                                                                          ttAAATCACAACTCATTACCAGCTATAGCCATAGCAAAGATTACAACTACGATCCCCATTATGGTCGTTATGATTCGTCGGCGACGCTCGATGAGATGAAGCAATaca                                                                                                                                   <  2:31434/108‑1 (MQ=255)                                                                                                                                                                                                                                                  aattggtacggttatcatagccatagcAAAGATTACAACTACGATCCCCATTAt                                                                                                                                                                                 >  1:448095‑M2/28‑54 (MQ=255)                                                                                                                                                                                                                                                      ggtacggttatcatagccatagcAAAGATTACAACTACGATCCCCATTATGGTc                                                                                                                                                                             <  2:448088‑M2/31‑1 (MQ=255)                                                                                                                                                                                                                                                                          agcAAAGATTACAACTACGATCCCCATTATGGTCGTTATGATTCGTCGGCGACGCTCGATGAGATGAAGCAATACACCGTCCAGTGGGCAAACAATGTCATCGTTGGTc                                                                                                  >  1:384320‑M2/4‑109 (MQ=255)                                                                                                                                                                                                                                                                          agcAAAGATTACAACTACGATCCCCATTATGGTCGTTATGATTCGTCGGCGACGCTCGATGAGATGAAGCAATACACCGTCCAGTGGGCAAACAATGTCATCGTTGGTCACGGTAGTATTGGTGCGGGTGTCGACTGGCAGAAACAGACTACGACGCCgg                                               >  1:155011‑M2/4‑160 (MQ=255)                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                          TGGTAATACCGGAACGCAAGCGCAGACAGATAACGATGGTTTTTTAAGTAAAACGCTTTATGGCGCGCTGGAGCATAACTTTACTGATGCCTGGAGCGGCTTTGTGCGCGGCTATGGCTATGATAACCGTACCAATTATGACGCGTATTATTCTCCCGGTTCACCGTTGCTCGATACCCGTAAACTCTATAGCCAAAGTTGGGACGCCGGGCTGCGCTATAACGGCGAACTGATTAAATCACAACTCATTACCAGCTATAGCCATAGCAAAGATTACAACTACGATCCCCATTATGGTCGTTATGATTCGTCGGCGACGCTCGATGAGATGAAGCAATACACCGTCCAGTGGGCAAACAATGTCATCGTTGGTCACGGTAGTATTGGTGCGGGTGTCGACTGGCAGAAACAGACTACGACGCCGGGTACAGGTTATGTTGAGGATGGATATGATCAACGTAATACCGGCA  >  CP009273/4154175‑4154644

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.