New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 = 422753979 (2.060)8 (0.220) 4/296 NT 10.2% coding (715/738 nt) yjbG extracellular polysaccharide export OMA protein
?CP009273 = 4227719 67 (1.850)coding (158/2097 nt) yjbH DUF940 family extracellular polysaccharide protein

ATGCCCGGCAGCATTATTTATGTTGGCCTCGCGGACTCCGTCTGGAGTGAGACGCCTGATGCCCTTAACGCCGACATTCTTCAGACTCTGACGCAGCGGATACCTCAATAATGAAAAAAAGACATCTGCTTAGCTTACTGGCGCTGGGCATTAGCACAGCTTGCTACGGCGAAACATATCCTGCGCCCATTGGTCCGTCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCTTCCCGTGGCTGGAAACAACGCTGCGCTACACCGACGTGCGCACCCGGCAGTACAGCAGCGTCGAAGCGTTCTCTGGCGATCAAACGTATAAAGATAAAGCCTTCGATCTCAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGCGGTACGGGGCTGTTTGATGCGGAATATC  >  CP009273/4227452‑4227982
                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                       
aTGCCCGGCAGCATTATTTATGTTGGCCTCGCGGACTCCGTCTGGAGTGAGACGCCTGATGCCCTTAACGCCGTCATTCTTCAGACTCTGACGCAGCGGATACCTCAATAATGCAAAGAAGACATCTGCTTAGCTACCTGGCTCTGGGCATTAGCACAGCTTGCTACGGCGAAACATATCGTCCGCCCATTGGTCCGTCGCAGTAGGCTTTCGGTGGCGACGGATTATTACAAACGCCAACCGCGCGAATGGCACGGGAAGGGGAGTGgagtct                                                                                                                                                                                                                                                                   <  2:297371‑M2/274‑7 (MQ=255)
             ttatttatGTTGGCCTCGCGGACTCCGTCTGGAGTGAGACGCCTGATGCCCTTAACGCCGACATTCTTCAGACTCTGACGCAGCGGATACCTCAATAATGAAAAAAAGACATCTGCTTAGCGTACGGGCGCTGGGCATTAGCACAGGTTGCTACGGAAAAACATATCTTGCGACCATTGGGCCGTCGCAGTCGGATGTCGGTGGCGTAGGATTATTACAGACGCCCACCGCGCGTACGGCACGGGAAGGGGAGGTGAGTCTGAACTATCGCGATa                                                                                                                                                                                                                                                     <  1:297377/275‑1 (MQ=255)
              nnntgtcgTTAGCCTCGCGTACTCCGTCTGGAGGGAGAGGCCTGATGCCCTGAACGCCGACATTCTTCAGACTCTGACTCAGCGGATAACTCAATAATGAAAAAAAGACATCTGCTTAGCTTACTGGCGCTGGGCATTAGCACAGCTTGCTACGGCGAAACATATCCTGCGGCCATTGGTCCGTCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATa                                                                                                                                                                                                                                                     <  2:203756/267‑1 (MQ=255)
                        ggCCTCGCGGACTCCGTCTGGAGTGAGACGCCTGATGCCCTTAACGCCGACATTCTTCAGACTCTGACGCAGCGGATACCTCAATAATGAAAAAAAGACATCTGCTTAGCTTACTGGCGCTGGGCATTAGCACAGCTTGCTACGGCGAAACATATCCTGCGCCCATTGGTCCGTCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGGTGGAACTATCGCGATAACCATcctgtc                                                                                                                                                                                                                                          >  2:232898/1‑270 (MQ=255)
                         gCCTCGCGGACTCCGTCTGGAGTGAGACGCCTGATGCCCTTAACGCCGACATTCTTCAGACTCTGACGCAGCGGATACCTCAATAATGAAAAAAAGACATCTGCTTAGCTTACTGGCGCTGGGCATTAGCACAGCTTGCTACGGCGAAACATATCCTGCGCCCATTGGTCCGTCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGCGTTGAGTCTGAACTATCGCGATAACGATCAGTAc                                                                                                                                                                                                                                          >  1:203760/1‑274 (MQ=255)
                            tCGCGGACTCCGTCTGGAGTGAGACGCCTGATGCCCTTAACGCCGACATTCTTCAGACTCTGACGCAGCGGATACCTCAATAATGAAAAAAAGACATCTGCTTAGCTTACTGGCGCTGGGCATTAGCACAGCTTGCTACGGCGAAACATATCCTGCGCCCATTGGTCCGTCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATcg                                                                                                                                                                                                                                                          <  1:232903/255‑1 (MQ=255)
                                         ttGGAGTGACAACNCTGATGCCCGTAACCCCGCCAGTGTCTCGACTCTAACTCAGCGGACTCCTTATTAATGAAAAAAAGACATCGGGTTAGCTTCCTGGCGCTGGGCATTAGATCAGCTTGCTACGGCCAGACATATCCTGCGCCCATTGGGCCGTCGCAGTCGGATTTCGGTGGCGTAGGATTATTCCAAACGCCCGACGCGCGTATGGCACCGGAAGGCGAGTTGAGTCTGAACTATCGCGATAACGTGCAGTACCGTTATTACTCCGCtt                                                                                                                                                                                                                          <  2:528106/273‑1 (MQ=255)
                                                                                     ctctGACGCAGCGGATACCTCAATAATGAAAAAAAGACATCTGCTTAGCTTACTGGCGCTGGGCATTAGCACAGCTTGCTACGGCGAAACATATCCTGCGCCCATTGGTCCGTCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCTTCCCGTGGCTGGAAACAACGCTGCGCTACACCg                                                                                                                                                                             <  1:424755/275‑1 (MQ=255)
                                                                                                   atatctctctcatGAAAAGAATTCTTCTGCTTAGCTTATTGGCGCTGGGCATTAGCACAGCTTGCTACGGCGAAACATATCCTGCTCCCATTGGTCCGTCTCAGTCTGATTTCGGTTGCGTACGATTATTACAACCGCCCACCGCGCGTATGGCACGGGAAGGGTAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCTTCCCGTGGCTGGAAACAACGCTGCGCTACACCGACGTGCGCACCCgg                                                                                                                                                               <  1:683973/264‑1 (MQ=255)
                                                                                                                 aaaaaaaGACATCTGCTTAGCTTACTGGCGCTGGGCATTAGCACAGCTTGCTACGGCGAAACATATCCTGCGCCCATTGGTCCGTCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACt                                                                                                                                                                                                                                                              >  1:408636/1‑166 (MQ=255)
                                                                                                                     aaaGACATCTGCTTAGCTTACTGGCGCTGGGCATTAGCACAGCTTGCTACGGCGAAACATATCCTGCGCCCATTGGTCCGTCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATcg                                                                                                                                                                                                                                                          <  2:408629/166‑1 (MQ=255)
                                                                                                                             cTGCTTAGCTTACTGGCGCTGGGCATAAGCACAGCTTGCTACGGCGAAACATATCCTGCGCCCATTGGTCCGTCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAATACCGTTATTACNCAGCTTCANTGCAACTCTTCCCGTGGCTGGAAACAACGCTGCGCTACACCGACGTGCGCACCCGGCAGTACAGCAGCGTCGAAGCGTtccc                                                                                                                                     >  1:470899/1‑273 (MQ=255)
                                                                                                                                ctttacttaCTGGCGCTGGGCATTAGCACAGCTTGCTACGGCGAAACATATCCTGCGCCCATTGGTCCGTCGCAGTCGGATTTCGGTGGCNTAGGATTATTACAAACGCGCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCTTCCCGTGGCTGGAAACAACGCTGCGCTACACCGACGTGCGCACCCGGCAGTACAGCAGCGTCGAAGCGTTCTCTg                                                                                                                                   <  1:520952/269‑1 (MQ=255)
                                                                                                                                          tGGCGCTGCGCATTAGCACAGCTTGCTACGGCGAAACACATCCTGCGCCCATTCGTCTGTCGCAGTCGGATTTTGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCTTCCCGTGGCTGGACATAACGCCGCGCTACACCGACGTGGCCACCCGGCAGCACAGCCGCGGCGCAGCGGTCACTGGCGAGCAAACg                                                                                                                        >  2:678009/1‑275 (MQ=255)
                                                                                                                                             cgcTGGGCATTAGCACAGCTTGCTACGGCGAAACATATCCTGCGCCCATTGGTCCGTCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCTTCCCGTGGCTGGAAACAACGCTGCGCTACACCGACGTGCGCACCCGGCAGTACAGCAGCGTCGAAGCGTTCTCTGGCGATCAAACGtat                                                                                                                     <  1:443286/275‑1 (MQ=255)
                                                                                                                                              gcTGGGCATTCGCACAGCTTGCTACGGCGAAACATATCCTGCGCCCATTGGTCCGTCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCATGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCTTCCCGTGGCTGGAAACAACGCTGCGCGACACCGACGTGCGCACCCGGCAGTACAGCAGCGTCGAAGCGTTCTCTGGCGAt                                                                                                                              <  1:678018/265‑1 (MQ=255)
                                                                                                                                               cTGGGCATTAGCACAGCTTGCTACGGCGAAACATATCCTGCGCCCATTGGTCCGTCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGAt                                                                                                                                                                                                                                                >  1:293387/1‑150 (MQ=255)
                                                                                                                                               cTGGGCATTAGCACAGCTTGCTACGGCGAAACATATCCTGCGCCCATTGGTCCGTCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCTTCCCGTGGCTGGAAACAACGCTgcgc                                                                                                                                                                                    >  2:560645/1‑210 (MQ=255)
                                                                                                                                                   gCATTAGCACAGCTTGCTACGGCGAAACATATCCTGCGCCCATTGGTCCGTCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGt                                                                                                                                                                                                                                            <  2:293381/150‑1 (MQ=255)
                                                                                                                                                   gCATTAGCACAGCTTGCTACGGCGAAACATATCCTGCGCCCATTGGTCCGTCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCTTCCCGTGGCTGGAAACAACGCTGCGCTaca                                                                                                                                                                                <  1:560654/210‑1 (MQ=255)
                                                                                                                                                            caGCTTGCTCCGGCGAAACATATCCTGCGCCCATTGGTCCGTCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCTTCCCGTGGCTGGAAACAACACTGCGCTACACCGACGTGCGCACCCGGCAGTACAGCAGCGTCGAAGCGTTCTCTGGCGATCAAACGTATAAAGATAAAGCCtt                                                                                                       <  1:379404/274‑1 (MQ=255)
                                                                                                                                                               cTTGCTACGGCGAAACATATCCTGCGCCCATTGGTCCGTCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCTTCCCGTGGCTGGAAACAACGCTGCGCTACACCGACGTGCGCACCCGGCAGTACAGCAGCGTCGAAGCGTTCTCTGGCGATCAAACGTATAAAAATAAAGCCtt                                                                                                       <  2:650117/271‑1 (MQ=255)
                                                                                                                                                               cTTGCTACGGCGAAACATATCCTGCGCCCATTGGTCCGTCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATGACTCAGCTTCAGTGCAACTCTTCCCGTGGCTGGAAACAACGCTGCGCTACACCGACGTGCGCACCCGGCAGTACAGCAGCGTCGAAGCGTTCTCTGGCGATCAAACGTATAAAAATAAAGCCtt                                                                                                       >  1:650126/1‑271 (MQ=255)
                                                                                                                                                                ttGCTACGGCGAAACNTATCCTGCGCCCATTGGTCCGTCTCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCTTCCCGTGGCTGGATACAACGCTGCGCTACAcc                                                                                                                                                                              <  1:565359/199‑1 (MQ=255)
                                                                                                                                                                 tgttACGGCAAAACATATCCTGCTCCCATTGCTCCGTCACAGTCGGAGTTCGGTGGCGTAGGCTTATTACAAACGCCCACCGGGCGTATGGTACGGAAAGGGGAGTTGAGTCTGAACTATcg                                                                                                                                                                                                                                                          <  2:636215/119‑1 (MQ=255)
                                                                                                                                                                  gCTACGGCGAAACATATCCTGCGCCCATTGGTCCGTCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCTTCCCGGGGCTGGAaac                                                                                                                                                                                              >  2:60378/1‑181 (MQ=255)
                                                                                                                                                                      cGGCGAAACATATCCTGCGCCCATTGGTCCGTCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCTTCCCGTGGCTGGAAACAACg                                                                                                                                                                                          <  1:60379/181‑1 (MQ=255)
                                                                                                                                                                         cGAAACATATCCTGCGCCCATTGGTCCGTCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTgagtctgaa                                                                                                                                                                                                                                                                <  2:423998‑M2/108‑10 (MQ=255)
                                                                                                                                                                             aCATATCCTGCGCCCATTGGTCCGTCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTAt                                                                                                                                                                                                                                                            <  1:424005/108‑1 (MQ=255)
                                                                                                                                                                                 atCCTGCGCCCATTGGTCCGTCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGa                                                                                                                                                                                                                                                 >  2:386197/1‑115 (MQ=255)
                                                                                                                                                                                  caagtcgcCCAGTGGGCCGTCGCGTTGGGAGTTGGGGTGCGTAGGATTATTCCAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTTAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGGGCAACTCTTCCCGTGGCTGGAAACAGCGCTGCGCTACACCGACGTGCGCACCCGGCAGTACAGCAGCGTCGAAGCGTTCTCTGGCGATCAAACGTATAAAGATAAAGCCTTCGATCTCAAACTGCGTTTGTggg                                                                                <  2:609294/270‑1 (MQ=255)
                                                                                                                                                                                     tGCGCCCATTGGTCCGTCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAg                                                                                                                                                                                                                                             <  1:386203/115‑1 (MQ=255)
                                                                                                                                                                                       cgcCCATTGGTCCGTCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGttat                                                                                                                                                                                                                                    >  1:110951/1‑122 (MQ=255)
                                                                                                                                                                                       cgcCCATTGGTCCGTCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCTTCCCGTGGCTGGAAACAACGCTGCGCTac                                                                                                                                                                                 >  2:334728/1‑173 (MQ=255)
                                                                                                                                                                                        gcCCATTGGTCCGTCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCTTCCCGTGGCTGGAAACAACGCTGCGCTACACCGACGTGCGCACCCGGCAGTACAGCAGCGTCGAAGCGTTCTCTGGCGATCAAACGTataaagataaag                                                                                                           >  1:113153/1‑242 (MQ=255)
                                                                                                                                                                                           cATTGGTCCGTCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACt                                                                                                                                                                                                                                <  2:110950/122‑1 (MQ=255)
                                                                                                                                                                                           cATTGGTCCGTCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCTTCCCGTGGCTGGAAACAACGCTGCGCTACACCg                                                                                                                                                                             <  1:334734/173‑1 (MQ=255)
                                                                                                                                                                                            aTTGGTCCGTCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCTTCCCGTGGCTGGAAACAACGCTGCGCTACACCGACGTGCGCACCCGGCAGTACAGCAGCGTCGAAGCGTTCTCTGGCGATCAAACGTATAAAGATAAAGCCtt                                                                                                       <  2:113152/242‑1 (MQ=255)
                                                                                                                                                                                                 tCCGTCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGa                                                                                                                                                                                                                                                       >  2:318708/1‑93 (MQ=255)
                                                                                                                                                                                                   cGTCGCAGTCGGATTTCGGTGGCGTAGGCTTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGa                                                                                                                                                                                                                                                       >  1:544271/1‑91 (MQ=255)
                                                                                                                                                                                                    gTCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTgagtctgaagaatgtcggcgttaagggcatcaggcgtctcactccagacggagtccgcgaggccaacatcaataatgctgccgggcatcggctctacgtgacgcttgttccagtaagccaccggcgctttttgcgtgcgtccgtccgggtaaaccacccacgcgtagctgcgatccgcaccgctgcgcaggctctggtccgag                                                              <  1:163376‑M2/275‑204 (MQ=255)
                                                                                                                                                                                                    gTCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTgagtctgaagaatgtcggcgttaagggcatcaggcgtctcactccagacggagtccgcgaggccaacataaataatgctgccgggcatcggctctacgtgacgcttgttccagtaagcaaccggcgctttttgcgtgcgtccgtccgggtaaaccacccacgcgtagctgcgatccgcaccgctgagcaggctctggtaagag                                                              <  1:354972‑M2/275‑204 (MQ=255)
                                                                                                                                                                                                    gTCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTgagtctgaagaatgtcggcgttaagggcatcaggcgtctcactccagacggagtccgcgaggc                                                                                                                                                                                                          <  1:92229‑M2/135‑64 (MQ=255)
                                                                                                                                                                                                     tCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAAc                                                                                                                                                                                                                                                   <  1:318714/93‑1 (MQ=255)
                                                                                                                                                                                                       gCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAAc                                                                                                                                                                                                                                                   <  2:544262/91‑1 (MQ=255)
                                                                                                                                                                                                        cAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTgagtctgaagaatgtcggcgttaagggcatcaggcgtctcactccagacggagtccgcgaggccaac                                                                                                                                                                                                      >  2:92228‑M2/1‑68 (MQ=255)
                                                                                                                                                                                                             ggATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTGTGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCTTCCCGTGGCTGGAAACAACGCTGCGCTACACCGACGTGCGCGCCCGGCAGTACAGCAGCGTNGAAGCGTTCTCTGGCGATCAAACGTATAAAGATAAAGCCTTCGATCTCAAACTGAGATTGTGGGAAGAGAGATAATGGCTGCCGAAAGTgg                                                     >  1:553390/1‑275 (MQ=255)
                                                                                                                                                                                                                     gTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCTTCCCGTGGCTGGAaac                                                                                                                                                                                              >  2:56809/1‑130 (MQ=255)
                                                                                                                                                                                                                         cGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCTTCCCGTGGCTGGAAACAACg                                                                                                                                                                                          <  1:56809/130‑1 (MQ=255)
                                                                                                                                                                                                                           tAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTgagtctgaagaatgtcggcgttaagggcatcaggcgtctcactccagacggagtccgcgaggccaacataaataatgctgccgggcatcggctctacgtgacgcttgttccagtaagccaccggcgctttttgcgtgcgtccgtcctggtaaaccacccacgcgtagctgcgatccgcaccgctgagcaggctctggtcagagagatagctcgccacgtcgcg                                          <  1:680181‑M2/272‑224 (MQ=255)
                                                                                                                                                                                                                           tAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTgagtctgaagaatgtcggcgttaagggcatcaggcgtctcactccagacggagtccgcgaggccaacataaataatgctgccgggcatcggctctacgtgacgcttgttccagtaagccaccggcgctttttgcgtgcctccgtccgggtaaaccacccactcgtagctgcgatcctcaccgctgagcaggctctggtcagagagctagctcaccacggcgcgacc                                       <  1:112563‑M2/275‑227 (MQ=255)
                                                                                                                                                                                                                           tAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTgagtctgaagaatgtcggcgttaagggcatcaggcgtctcactccagacggagtccgcgaggccaacataaataatgctgccgggcatcggctctacgtgacgcttgttccagtaagcca                                                                                                                                                 <  1:284922‑M2/169‑121 (MQ=255)
                                                                                                                                                                                                                              gtttattaGAAACGTCACTCGCGCGTATGGTACGGGAAGGGGAGTGGAGTCTGAACTATCTCGATAACGATCAGTACCGTTATTACTAAGCTTCAGTGCAACTCTTCCCGTGGCTGGAAACATAGCTGTGCTACACCGACGTGCGCACCCGGCAGTACAGCAGCGTCGAAGCGTTCTCTGGCGATCAAACGTATAAAGATAAAGCCTTCGATCTCAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGat                                    <  1:644310/273‑1 (MQ=255)
                                                                                                                                                                                                                              gATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATaa                                                                                                                                                                                                                                                    >  2:385105/1‑67 (MQ=255)
                                                                                                                                                                                                                              gATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCtt                                                                                                                                                                                                             >  2:489376/1‑106 (MQ=255)
                                                                                                                                                                                                                              gATTATTACAAACGCCCACCGCGCGTATAGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCa                                                                                                                                                                                                                                              >  1:547580/1‑73 (MQ=255)
                                                                                                                                                                                                                               attattACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTgagtctgaagaatgtcggcgttaagggcatcaggcgtctcactccagacggagtccgcgaggccaacataaataatgctgccgggcatcggctctacgtgacgcttgttccagtaagccaccgg                                                                                                                                             >  2:284917‑M2/1‑45 (MQ=255)
                                                                                                                                                                                                                               attagtACAAGAGGCCACAGCGCGGTAGGCACGGGTCGTGGTGTTGTGGTTTAACTTGGGCGATAACGATCTGTACCGGTATACTTTAGCTTCAGTGCAACTCCTCCCGGGGCTGGACAAAACGCTTCGTTACACTGGCGTGGGAACCCGGCAGGAGAGCAGCGTCGAAGAGTTGTCTGGAGATCAAACGTATAAAGATAAAGAATTCGATCTCAAACTGCGTGTGTGGGAAGAGAGTTAGTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGat                                    <  2:621062/274‑1 (MQ=255)
                                                                                                                                                                                                                                  attaCAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGAt                                                                                                                                                                                                                                                <  1:385111/67‑1 (MQ=255)
                                                                                                                                                                                                                                  attaCAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTAc                                                                                                                                                                                                                                          <  2:547571/73‑1 (MQ=255)
                                                                                                                                                                                                                                  attaCAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGtt                                                                                                                                                                                                                                      >  2:639632/1‑77 (MQ=255)
                                                                                                                                                                                                                                  attaCAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCtt                                                                                                                                                                                                             >  2:345942/1‑102 (MQ=255)
                                                                                                                                                                                                                                  attaCAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCTTCCCGTGGCTGGAAACAACGc                                                                                                                                                                                         >  2:445043/1‑122 (MQ=255)
                                                                                                                                                                                                                                  attaCAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTAATCAGCTTCAGTGCAACTCTTCCCg                                                                                                                                                                                                         <  1:489383/106‑1 (MQ=255)
                                                                                                                                                                                                                                      cAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGttatta                                                                                                                                                                                                                                  <  1:639641/77‑1 (MQ=255)
                                                                                                                                                                                                                                      cAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCTTCCCg                                                                                                                                                                                                         <  1:345948/102‑1 (MQ=255)
                                                                                                                                                                                                                                      cAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCTTCCCGTGGCTGGAAACAACGCTgcg                                                                                                                                                                                     <  1:445050/122‑1 (MQ=255)
                                                                                                                                                                                                                                            cccACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCTTCCCGTGGCTGGAAACAACGc                                                                                                                                                                                         >  1:570945/1‑112 (MQ=255)
                                                                                                                                                                                                                                              cccagcgggTATTGCGCGGGAGGGGGATTTGATTTTGAATGTTCGCGATACCGATTAGTATCGTTATTCCTTCGTTTCACTGCAACTCTTCCCGTGGCTGGAAACAGCGCTGGGCGACACCGACGTGCGCACCCGGCAGTTCAGCAGCGTCGAAGCGTTCTCTGGCGATCAAGCGTATAAAGATACAGCCTTCGATCTCAAGCTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGCGGTACgggg                     <  2:185837/270‑1 (MQ=255)
                                                                                                                                                                                                                                                ccGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCTTCCCGTGGCTGGAAACAACGCTgcg                                                                                                                                                                                     <  2:570936/112‑1 (MQ=255)
                                                                                                                                                                                                                                                   cgcgTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCTTCCCGTGGCTGGAaac                                                                                                                                                                                              >  1:176791/1‑100 (MQ=255)
                                                                                                                                                                                                                                                   cgcgTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCTTCCCGTGGCTGGAAACAACGCTGCGCTACACCGACGTgcgc                                                                                                                                                                     >  2:157479/1‑125 (MQ=255)
                                                                                                                                                                                                                                                     cgTATGGCACGGGCAGGGGCGTTGAGTCTGAACTATCGCGATAACGATCa                                                                                                                                                                                                                                              >  2:341949/1‑50 (MQ=255)
                                                                                                                                                                                                                                                     cgTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCa                                                                                                                                                                                                                                              >  2:691128/1‑50 (MQ=255)
                                                                                                                                                                                                                                                       tATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCTTCCCGTGGCTGGAAACAACg                                                                                                                                                                                          <  2:176788/100‑1 (MQ=255)
                                                                                                                                                                                                                                                       tATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCTTCCCGTGGCTGGAAACAACGCTGCGCTACACCGACGTGCGCAccc                                                                                                                                                                 <  1:157482/125‑1 (MQ=255)
                                                                                                                                                                                                                                                         tGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTAc                                                                                                                                                                                                                                          <  1:691137/50‑1 (MQ=255)
                                                                                                                                                                                                                                                                 gAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACGCTTCCCGTGGCTGGCAACAACGCTGCGCTACACCGACGTGCGCACCCGGCAGTACAGCAGCGTCGAAGCGTTCTCTGGCGATCAAACGTCTAAAGACAAAGCATTCGCTCACCAACTGCGTTTGGGGGAAGAGAGTGATTGACTGCAGAAAGTGGCGGTGGGTGCGGGGGAGACGGGCGGCAGGGGGCGGGTGGATggggggtggc  >  2:652201/1‑268 (MQ=255)
                                                                                                                                                                                                                                                                      ggAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCTTCCCGTGGCTGGAaacaac                                                                                                                                                                                           >  1:75961/1‑84 (MQ=255)
                                                                                                                                                                                                                                                                          ttGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCTTCCCGTGGCTGGAAACAACGc                                                                                                                                                                                         >  1:147643/1‑82 (MQ=255)
                                                                                                                                                                                                                                                                          ttGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCTTCCCGTGGCTGGAAACAACGCTg                                                                                                                                                                                       <  2:75960/84‑1 (MQ=255)
                                                                                                                                                                                                                                                                          ttGAGTCTGAACGATCCCCAGAACGACCAGTAGCGTGATTACTTGGCTTCAGTTCGACACTTCCCGTTGCTGGAAACAACGCTGCGCTACACCGACGTGCGCAc                                                                                                                                                                   >  2:152052/1‑104 (MQ=255)
                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                       
ATGCCCGGCAGCATTATTTATGTTGGCCTCGCGGACTCCGTCTGGAGTGAGACGCCTGATGCCCTTAACGCCGACATTCTTCAGACTCTGACGCAGCGGATACCTCAATAATGAAAAAAAGACATCTGCTTAGCTTACTGGCGCTGGGCATTAGCACAGCTTGCTACGGCGAAACATATCCTGCGCCCATTGGTCCGTCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCTTCCCGTGGCTGGAAACAACGCTGCGCTACACCGACGTGCGCACCCGGCAGTACAGCAGCGTCGAAGCGTTCTCTGGCGATCAAACGTATAAAGATAAAGCCTTCGATCTCAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGCGGTACGGGGCTGTTTGATGCGGAATATC  >  CP009273/4227452‑4227982

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.