New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	4400073 =	63 (1.640)	12 (0.330)	6/296	NT	17.3%	coding (124/402 nt)	yjfI	DUF2170 family protein
	?	CP009273	4400344 =	55 (1.520)					coding (395/402 nt)	yjfI	DUF2170 family protein

TTCTTTTTACTTCCCGCCAAATGATTATCGAAACCTTTATTTGTCCGGTGAGTAGTATCAGCAATCCAGATGAATTTAATACCTTCTTATTAAGAAATCAGAAGATGATGCCGTTGTCATCGGTAGGGATCTCCAGCGTACAACAGGAAGAGTATTACATTGTTTTCGGGGCGTTATCGCTTAAATCTTCTCTTGAAGATATCCTGCTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAGTTTATTTACGCTGGGGAAATCGTTTATCTCCCAGGCGGAAGAATCCATTGAAGAAACCCAGGGCGTGCGCATGCTGGAACAGCATATTCGTGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGAAATTAAGTCACGATAAGCTGAAAGATTTACGTGAGCGCAAAGCCAGTCTGGAAGCC  >  CP009273/4400077‑4400594                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                           ttttttttAATTGCCGCCAAATGATTATCTATTCCTTTATTTTTCCGGTGAGTAGTATCAGCAATCCAGATGAATTTAATACCTTCTTATTAAGAAATCAGAAGATGATGCCGTTGTCATCTGTAGGGATCTCCAGCGTACAACAGGAAGAGTATTACATTGTTTTCGGCGCGTTATCGCTTAAATCTTCTCTTGAAGATATCCTGCTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACt                                                                                                                                                                                                                                                       <  2:642626/270‑1 (MQ=255)    TTTTTACTTCCCGCCAAATGATTATCGAAACCTTTATTTGTCCGGTGAGTAGTATCAGCAATCCAGATGAATTTAATACCTTCTTATTAAGAAATCAGAAGATGATGCCGTTGTCATCGGTAGGGATCTCCAGCGTACAACAGGAAGAGTATTACATTGTTTTCGGGGCGTTATCGCTTAAATCTTCTCTTGAAGATATCCTGCTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAAACAATTCACCCTAATTa                                                                                                                                                                                                                                                  <  2:232069‑M1/275‑1 (MQ=255)        tACTTCCCGCCAAATGATTATCGAAACCTTTATTTGTCCGGTGAGTAGTATCAGCAATCCAGATGAATTTAATACCTTCTTATTAAGAAATCAGAAGATGATGCCGTTGTCATCGGTAGGGATCTCCAGCGTACAACAGGAAGAGTATTACATTGTTTTCGGGGCGTTATCGCTTAAATCTTCTCTTGAAGATATCCTGCTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACt                                                                                                                                                                                                                                                       <  1:232074/266‑1 (MQ=255)           ttaacgaaaaaTGGTTATCGAAACTTTTATTTGTCCTGTGAGTAGTATCAGCAATCCAGATGAATTTAATACCTTCTTATTAAGAAATCAGAAGATGATGCCGTTGTCATCGGTAGGGATCTCCAGCGTACAACAGGAAGAGTATTACATTGTTTTCGGGGCGTTATCGCTTAAATCTTCTCTTGAAGATATCCTGCTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGAc                                                                                                                                                                                                                                           <  2:509328/267‑1 (MQ=255)           ttCCCGCCAAATGATTATCGAAACCTTTATTTGTCCGGTGAGTAGTATCAGCAATCCAGATGAATTTAATACCTTCTTATTAAGAAATCAGAAGATGATGCCGTTGTCATCGGTAGGGATCTCCAGCGTACAACAGGAAGAGTATTACATTGTTTTCGGGGCGTTATCGCTTAAATCTTCTCTTGAAGATATCCTGCTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGAc                                                                                                                                                                                                                                           <  1:185197/275‑1 (MQ=255)                                             aggttatctcaagcaggatatcttcaagagaagatttaagcgataacgccccgaaaacaatgtaatactcttcctgttgtacgctggagatccctaccgatgacaacggcatcatcttctgatttcttaataagaaggtattaaattcatctggattgctgatactactcaccggacaaataaaggtttcgataatcatttggcgggaagtaaaaagaatattAACACTAATTACAAGGACTTTTATTNNTGGGAATTTTCNNCattttatttta                                                                                                                                                                                                         >  2:332327‑M2/224‑273 (MQ=255)                                                        taTCAGCAATCCAGATGAATTTAATACCTTCTTATTAAGAAATCAGAAGATGATGCCGTTGTCATCGGTAGGGATCTCCAGCGTACAACAGGAAGAGTATTACATTGTTTTCGGGGCGTTATCGCTTAAATCTTCTCTTGAAGATATCCTGCTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTAAAAGGACGGGAATATATGGGAATTTTAAAAAGTGTATTTACGATggttaaaa                                                                                                                                                                                              >  2:616292/1‑269 (MQ=255)                                                                       tGAATTTTATACTTTCTTATTAAGAAATCAGAAGATGATGCCGTTGTCATCGGTAGGGATCTCCAGCGTACAACAGGAACAGTATTACATTGTTTTCGGGGCGTTATCGCTTAAATCTTCTCTTGAAGATATCCTGCTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAGTTTATTTACGCTGGGGAAATCGTTTATCTCCCAgg                                                                                                                                                                               <  1:717788/275‑1 (MQ=255)                                                                           tttAATACCTTCTTATTAAGAAATCAGAAGATGATGCCGTTGTCATCGGTAGGGATCTCCAGCGTACAACAGGAAGAGTATTACATTGTTTTCGGGGCGTTATCGCTTAAATCTTCTCTTGAAGATATCCTGCTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAgg                                                                                                                                                                                                                                             >  1:595467/1‑209 (MQ=255)                                                                               aTACCTTCTTATTAAGAAATCAGAAGATGATGCCGTTGTCATCGGTAGGGATCTCCAGCGTACAACAGGAAGAGTATTACATTGTTTTCGGGGCGTTATCGCTTAAATCTTCTCTTGAAGATATCCTGCTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTca                                                                                                                                                                                                                                                           <  1:317887/191‑1 (MQ=255)                                                                               aTACCTTCTTATTAAGAAATCAGAAGATGATGCCGTTGTCATCGGTAGGGATCTCCAGCGTACAACAGGAAGAGTATTACATTGTTTTCGGGGCGTTATCGCTTAAATCTTCTCTTGAAGATATCCTGCTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACgg                                                                                                                                                                                                                                         <  2:595458/209‑1 (MQ=255)                                                                                     tcttATTAAGAAATCAGAAGATGATGCCGTTGTCATCGGTAGGGATCTCCAGCGTACAACAGGAAGAGTATTACATTGTTTTCGGGGCGTTATCGCTTAAATCTTCTCTTGAAGATATCCTGCTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGCATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAGTTTATTTACGCTGGGGAAATCGTTTATCTCCCAGGCGGAAGAATCAAt                                                                                                                                                                  >  1:403955/1‑274 (MQ=255)                                                                                     tcttATTAAGAAATCAGAAGATGATGCCGTTGTCATCGGTAGGGATCTCCAGCGTACAACAGGAAGAGTATTACATTGTTTTCGGGGCGTTATCGCTTAAATCTTCTCTTGAAGATATCCTGCTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTaa                                                                                                                                                                                                                      >  1:75472/1‑222 (MQ=255)                                                                                     tcttATTAAGAAATCAGAAGATGATGCCGCTGTCATCGGTAGGGATCTCCAGCGTACAACAGGAAGAGTATTACATTGTTTTCGGGGCGTTATCGCTTAAATCTTCTCTTGAAGATATCCTGCTTGAGATAATCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACACGGACGGGTATTTATGGGAATTTTAAAAAGTTTATTTACGCTGGGGAAATCGTTTATCTCCCAGGCGGAACAATCAAtt                                                                                                                                                                 >  2:317014/1‑275 (MQ=255)                                                                                        tattaAGAAATCAGAAGATGATGCCGTTGTCATCGGTAGGGATCTCCAGCGTACAACAGGAAGAGTATTACATTGTTTTCGGGGCGTTATCGCTTAAATCTTCTCTTGAAGATATCNTGCTTGAGATACCCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAGTTTATTTACGCTGGGGAAATCGTTTATCTCCCAGGCGGAAGAATCCATTgaa                                                                                                                                                              <  1:668789/275‑1 (MQ=255)                                                                                         attaAGAAATCAGAAGATGATGCCGTTGTCATCGGTAGGGATCTCCAGCGTACAACAGGAAGAGTATTACATTGTTTTCGGGGCGTTATCGCTTAAATCTTCTCTTGAAGATATCCTGCTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAg                                                                                                                                                                                                                  <  2:75471/222‑1 (MQ=255)                                                                                          acgccccgaaaacaatgtaatactcttcctgttgtacgctggagatccctaccgatgacaacggcatcatcttctgatttcttaataagaaggtattaaattcatctggattgctgatactactcaccggacaaataaaggtttcgataatcatttggcgggaggtaaaaagaatattCACACNAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAGTTTATTTACGCTGGGGAAATCGTTTATCTCCCAGGCGGAAGAATCCATTgaaga                                                                                                                                                            >  1:560154‑M2/179‑275 (MQ=255)                                                                                          acgccccgaaaacaatgtaatactcttcctgttgtacgctggagatccctaccgatgacaacggcatcatcttctgatttcttaataagaaggtattaaattcatctggattgctgatactactcaccggacaaataaaggtttcgataatcatttggcgggaagtaaaaagaatattCACACTAATTACAAGGACGGGTATTTATGGGAATTTTaa                                                                                                                                                                                                                      >  2:89608‑M2/179‑217 (MQ=255)                                                                                          acgccccgaaaacaatgtaatactcttcctgttgtacgctggagatccctaccgatgacaacggcatcatcttctgatttcttaataagaaggtattaaattcatctggattgctgatactactcaccggacaaataaaggtttcgataatcatttggcgggaagtaaaaagaatattCACACTAATTACAAGGACGGGTATTTATGGGAATTTTaa                                                                                                                                                                                                                      >  1:359987‑M2/179‑217 (MQ=255)                                                                                              cccgaaaacaatgtaatactcttcctgttgtacgctggagatccctaccgatgacaacggcatcatcttctgatttcttaataagaaggtattaaattcatctggattgctgatactactcaccggacaaataaaggtttcgataatcatttggcgggaagtaaaaagaatattCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAg                                                                                                                                                                                                                  <  1:89609‑M2/43‑1 (MQ=255)                                                                                              cccgaaaacaatgtaatactcttcctgttgtacgctggagatccctaccgatgacaacggcatcatcttctgatttcttaataagaaggtattaaattcatctggattgctgatactactcaccggacaaataaaggtttcgataatcatttggcgggaagtaaaaagaatattCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAg                                                                                                                                                                                                                  <  2:359981‑M2/43‑1 (MQ=255)                                                                                                         tgtaatactcttccttttgtacgcttgagatccctaccgatgacaacggcatcatcttctgatttcttaataagaaggtattaaattcatctggattgctgatactactcaccggacaaataaaggtttcgataatcatttggcgggaagtaaaaagaatattCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAGTTTATTTACGCTGGGGAAATCGTTTATCTCCCAGGCGGAAGAATCCATTGAAGAAACCCAGGGCGTgcg                                                                                                                                             <  1:332333‑M2/112‑1 (MQ=255)                                                                                                         tgtaatactcttcctgttgtacgctggagatccctaccgatgacaacggcatcatcttctgatttcttaataagaaggtattaaattcatctggattcctgatactactcaccggacaaataaaggtttcgataatcatttggcgggaagtaaaaagaatattCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAGTTTATTTACGCTGGGGAAATCGTTTATCTCCCAGGCGGAAGAATCCATTGAAGAAACCCAGGGCGTgcg                                                                                                                                             <  1:399572‑M2/112‑1 (MQ=255)                                                                                                                                    tgcAGCGTAGAATAGGATGTGTATTACTTTGTTTTCGGGGCATTATCGCTTAAATATTCTCTTGAAGATATCCTGCTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAGTTTATTTACGCTGGGGATATCGTTTATCTCCCAGGCGGAAGCATCCATTGAAGAATCCCAGGGCGTGCGCATGCTGGAACAGCATATTCGTGACGc                                                                                                                  <  1:317020/273‑1 (MQ=255)                                                                                                                                    tcCAGCGTACAACAGGAAGAGTATTACATTGTTTTCGGGGCGTTATCGCTTAAATCTTCTCTTGAAGATATCCTGCTTGAGATAACCTCTCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTAc                                                                                                                                                                                                                                                 >  2:699054/1‑148 (MQ=255)                                                                                                                                        gCGTACAACAGGAAGAGTATTACATTGTTTTCGGGGCGTTATCGCTTAAATCTTCTCTTGAAGATATCCTGCTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAgg                                                                                                                                                                                                                                             <  1:699063/148‑1 (MQ=255)                                                                                                                                           tACAACAGGAAGAGTATTACATTGTTTTCGGGGCGTTATCGCTTAAATCTTCTCTTGAAGATATCCTGCTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACGGGTACTTATGGGAATTTTAAAAAGTTTATTTACGCTGGGGAAATCGTTTATCTcc                                                                                                                                                                                   >  1:629429/1‑203 (MQ=255)                                                                                                                                               acaGGAAGAGTATTACATTGTTTTCGGGGCGTTATCGCTTAAATCTTCTCTTGAAGATATCCTGCTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAGTTTATTTACGCTGGGGAAATCGTTTATCTCCCAgg                                                                                                                                                                               <  2:629420/203‑1 (MQ=255)                                                                                                                                                      gagTAGTAAATTGTTTTGGGGGATGGTTAGCTTAAATCTTATTGGGCACATATCCTGCTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAGTTTATTTACGCTGGGGAAATCGTTTATCTCCCAGGCGGAAGAATCCATTGAAGAAACCCAGGGCGTGCGCATGCTGGAACAGCATATTCGTGACGCTAAAGCTGAACTCGATaa                                                                                                <  2:403948/275‑1 (MQ=255)                                                                                                                                                           ttACATTGTTTTCGGGGCGTTATCGCTTAAATCTTCTCTTGAAGATATCCTGCTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAGTTTATTTACGCTGGGGAAATCGTTTATCTCCCAGGCGGAAGAATCCATCTAAGAAACCCAGGGCGTGCGCATGCTGGa                                                                                                                                    >  2:680327/1‑234 (MQ=255)                                                                                                                                                               aTTGTTTTCGGGGCGTTATCGCTTAAATCTTCTCTTGACGATATCCTGCTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAGTTTATTTACGCTGGGGAAATCGTTTATCTCCCAGTCGGAAGAATCCATTGAAGAAACCCAGGGCGTGCGCATGCTGGAACAg                                                                                                                                <  1:680336/234‑1 (MQ=255)                                                                                                                                                                 tGTTTTCGGGGCGTTATCGCTTAAATCTTCTCTTGAAGATATCCTGCTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAGTTTATTTACGCTGGGGAAATCGTTTATCTCCCAGGCGGAAGAATCCATTGAAGAAACCCAGGGCGTGCGCATGCt                                                                                                                                       >  2:134226/1‑225 (MQ=255)                                                                                                                                                                 tGTTTTCGGGGCGTTATCGCTTAAATCTTCTCTTGAAGATATCCTGCTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAGTTTATTTACGCTGGGGAAATCGTTTATCTCCCAGGCGGAAGAATCCATTGAAGAAACCCAGGGCGTGCGCATGCTGGAACAGCATATTCGTGa                                                                                                                     >  2:173390/1‑243 (MQ=255)                                                                                                                                                                  tctgatttcttaataagaaggtattaaattcatctggattgctgatactactcaccggacaaataaaggtttcgataatcatttggcgggaagtaaaaagaatattCACACTAATTACAAGGACGGGTATTTATGGGAATTTTaa                                                                                                                                                                                                                      >  1:39827‑M2/107‑145 (MQ=255)                                                                                                                                                                  gTTTTCGGGGCGTTATCGCTTAAATCTTCTCTTGAAGATATCCTGCTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTcaca                                                                                                                                                                                                                                                         <  2:526950/110‑1 (MQ=255)                                                                                                                                                                   ttttCGGGGCGTTATCGCTTAAATCTTCTCTTGAAGATATCCTGCTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACg                                                                                                                                                                                                                                          >  2:277224/1‑124 (MQ=255)                                                                                                                                                                     ttCGGGGCGTTATCGCTTAAATCTTCTCTTGAAGATATCCTGCTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAGTTTATTTACGCTGGGGAAATCGTTTATCTCCCAGGCGGAAGAATCCATTGAAGAAACCCAGGGCGTGCGCATGCTGGaa                                                                                                                                   <  1:134227/225‑1 (MQ=255)                                                                                                                                                                     ttCGGGGCGTTATCGCTTAAATCTTCTCTTGAAGATATCCTGCTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAGTTTATTTACGCTGGGGAAATCGTTTATCTCCCAGGCGGAAGAATCCATTGAAGAAACCCAGGGCGTGCGCATGCTGGAACAGCATATTCGTGACGCt                                                                                                                 <  1:173393/243‑1 (MQ=255)                                                                                                                                                                      atttcttaataagaaggtattaaattcatctggattgctgatactactcaccggacaaataaaggtttcgataatcatttggcgggaagtaaaaagaatattCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAg                                                                                                                                                                                                                  <  2:39827‑M2/43‑1 (MQ=255)                                                                                                                                                                       cGGGGCGTTATCGCTTAAATCTTCTCTTGAAGATATCCTGCTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACGGGTa                                                                                                                                                                                                                                      <  1:277229/124‑1 (MQ=255)                                                                                                                                                                             gatATCGCTTAAATCTTCTCTTGAAGATATCCTGCTTGAGATAAGCTCGCTGGGAAATAACTCATTTGATCTGGCTGAAATTACAGACGAATATTCACACTAATTACAAGTCCGGGTATTTATGGGAATTTTAAAAAGTTTATTTACTCTGTGGAAATCGTTTATCTCCCATGCGGAAGAATCCATTGAAGAAAACCAGGGCGtt                                                                                                                                               >  2:274688/3‑204 (MQ=255)                                                                                                                                                                                 tCGCTTAAATCTTCTCTTGAAGATATCCTGCTTGAGATAACCTCGGTGGGAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAGTTTATTTACGCTGGGGAAATCGTTTATCTCCCAGGCGGAAGAATCCATTGAAGAAACCCAGGGCGTGCGCa                                                                                                                                           <  1:274693/205‑1 (MQ=255)                                                                                                                                                                                        aaTCTTCTCTTGAAGATATCCTGCTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAGTTTATTTACGCTGGGGAAATCGTTTATCTCCCAGGCGGAAGAAt                                                                                                                                                                      >  2:115942/1‑171 (MQ=255)                                                                                                                                                                                         aTCTTCTCTTGAAGATATCCTGCTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACa                                                                                                                                                                                                                                                >  2:407975/1‑96 (MQ=255)                                                                                                                                                                                            ttctCTTGAAGATATCCTGCTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAGTTTATTTACGCTGGGGAAATCGTTTATCTCCCAGGCGGAAGAATCCAt                                                                                                                                                                  <  1:115943/171‑1 (MQ=255)                                                                                                                                                                                             tctcTTGAAGATATCCTGCTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGa                                                                                                                                                                                                                                            <  1:407982/96‑1 (MQ=255)                                                                                                                                                                                                catctggattgctgatactactcaccggacaaataaaggtttcgataatcatttggcgggaagtaaaaagaatattCACACTAATTACAAGGACGGGTATTTATGGGAATTTTaa                                                                                                                                                                                                                      >  2:26463‑M2/77‑115 (MQ=255)                                                                                                                                                                                                    tggattgctgatactactcaccggacaaataaaggtttcgataatcatttggcgggaagtaaaaagaatattCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAg                                                                                                                                                                                                                  <  1:26463‑M2/43‑1 (MQ=255)                                                                                                                                                                                                              gCTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAGTTTATTTACGCTGGGGAAATCGTTTATCTCCCAGGCGGAAGAATCCATTGAAGAAACCCAGGGCGTGCGCATGCTGGANCAGCATATTCGTGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGAAATTAAGTCACGATAAGc                                        >  1:537436/1‑275 (MQ=255)                                                                                                                                                                                                              gCTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAAGTACAGAAGAATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAGTTTATTTACGCTGGGGAAATCGTTTATCTCCCAGGCgg                                                                                                                                                                            >  1:687984/1‑143 (MQ=255)                                                                                                                                                                                                               cTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAgg                                                                                                                                                                                                                                             >  1:301159/1‑77 (MQ=255)                                                                                                                                                                                                                  gagaTAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAGTTTATTTACGCTGGGGAAATCGTTTATCTCCCAGGCGgaaga                                                                                                                                                                        <  2:687975/143‑1 (MQ=255)                                                                                                                                                                                                                   agaTAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACgg                                                                                                                                                                                                                                         <  2:301153/77‑1 (MQ=255)                                                                                                                                                                                                                     aTAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTc                                                                                                                                                                                                                                                            <  1:151264/56‑1 (MQ=255)                                                                                                                                                                                                                     aTAACCTCGCTGGTACATAACGCTTTGGAACTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAGTTTATTTACg                                                                                                                                                                                                        >  1:497290/1‑108 (MQ=255)                                                                                                                                                                                                                         ccTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAGTTTATTTACGCTgg                                                                                                                                                                                                    <  2:497283/108‑1 (MQ=255)                                                                                                                                                                                                                              cTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAgg                                                                                                                                                                                                                                             >  2:347860/1‑62 (MQ=255)                                                                                                                                                                                                                                  tAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTcaca                                                                                                                                                                                                                                                         <  2:670967/46‑1 (MQ=255)                                                                                                                                                                                                                                  tAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACgg                                                                                                                                                                                                                                         <  1:347866/62‑1 (MQ=255)                                                                                                                                                                                                                                    gATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAGTTTATTTACGCTGGGGAAATCGTTTATCTCCCAGGCGGAAGAATCCATTGAAGAAACCCAGGGCGTGCGCATGCTGGAACAGCATATTCg                                                                                                                        >  1:609064/1‑173 (MQ=255)                                                                                                                                                                                                                                        aCGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAGTTTATTTACGCTGGGGAAATCGTTTATCTCCCAGGCGGAAGAATCCATTGAAGAAACCCAGGGCGTGCGCATGCTGGAACAGCATATTCGTGAc                                                                                                                    <  2:609055/173‑1 (MQ=255)                                                                                                                                                                                                                                            aTTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACa                                                                                                                                                                                                                                                >  2:692644/1‑45 (MQ=255)                                                                                                                                                                                                                                               ggATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAGTTTATTTACGCTGGGGAAATc                                                                                                                                                                                             >  1:439606/1‑93 (MQ=255)                                                                                                                                                                                                                                                gATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGa                                                                                                                                                                                                                                            <  1:692653/45‑1 (MQ=255)                                                                                                                                                                                                                                                   cTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAGTTTATTTACGCTGGGGAAATCGttt                                                                                                                                                                                         <  2:439599/93‑1 (MQ=255)                                                                                                                                                                                                                                                    tGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAGTTTATTTACGCTGGGGAAATCGTTTATCTCCCAGGCGGAAGAATCCATTGAAGAAACCCAGGGCGTGCGCATGCTGGAACAGCATATTCGTGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGAAATTAAGTCACGATAAGCTGAAAGAATTACGTGAGAGCAAAGCAAGTCTGGAAGcc  >  1:143816/1‑275 (MQ=255)                                                                                                                                                                                                                                                    aggCTGGAATTACAGAAGAATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTaa                                                                                                                                                                                                                      >  1:4245/2‑63 (MQ=255)                                                                                                                                                                                                                                                     ggCTGAAATTACAGAAGAATATTCACACTAATTACaa                                                                                                                                                                                                                                               >  1:459339/1‑37 (MQ=255)                                                                                                                                                                                                                                                        tggaaTTACAGAAGAATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAg                                                                                                                                                                                                                  <  2:4245/60‑1 (MQ=255)                                                                                                                                                                                                                                                         gAAATTACAGAAGAATATTCACACTAATTACAAGGAc                                                                                                                                                                                                                                           <  2:459332/37‑1 (MQ=255)                                                                                                                                                                                                                                                          aaaTTACAGAAGAATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAGTTTATTTACGCTGGGGAAATCGTTTATCTCCCAGGCGGAAGAATCCATTGAAGAAACCCAGGGCGTGCGCATGCt                                                                                                                                       >  2:598412/1‑136 (MQ=255)                                                                                                                                                                                                                                                          aaaTTACAGAAGAATATTCACACTAATTACAAGGACGGGTATGTATGGGAATTCTAAGAAGtttattt                                                                                                                                                                                                           >  2:221004/1‑68 (MQ=255)                                                                                                                                                                                                                                                              tACAGAAGAATATTCACACTAATTACAAGGACGGTTATTTATGGTAATTTTAAAAAGTTTATTTACGc                                                                                                                                                                                                       <  1:221009/68‑1 (MQ=255)                                                                                                                                                                                                                                                              tACAGAAGAATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAGTTTATTTACGCTGGGGAAATCGTTTATCTCCCAGGCGGAAGAATCCATTGAAGAAACCCAGGGCGTGCGCATGCTGGaa                                                                                                                                   <  1:598421/136‑1 (MQ=255)                                                                                                                                                                                                                                                                     gaatattCACACTAATTACAAGGACGGGTATTTATGGGAAtttt                                                                                                                                                                                                                        >  2:322824‑M2/8‑44 (MQ=255)                                                                                                                                                                                                                                                                         attCACACTAATTACAAGGACGGGTATTTATGGGAATTTTaaaa                                                                                                                                                                                                                    <  1:322830‑M2/41‑1 (MQ=255)                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                           TTCTTTTTACTTCCCGCCAAATGATTATCGAAACCTTTATTTGTCCGGTGAGTAGTATCAGCAATCCAGATGAATTTAATACCTTCTTATTAAGAAATCAGAAGATGATGCCGTTGTCATCGGTAGGGATCTCCAGCGTACAACAGGAAGAGTATTACATTGTTTTCGGGGCGTTATCGCTTAAATCTTCTCTTGAAGATATCCTGCTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAGTTTATTTACGCTGGGGAAATCGTTTATCTCCCAGGCGGAAGAATCCATTGAAGAAACCCAGGGCGTGCGCATGCTGGAACAGCATATTCGTGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGAAATTAAGTCACGATAAGCTGAAAGATTTACGTGAGCGCAAAGCCAGTCTGGAAGCC  >  CP009273/4400077‑4400594

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.