New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 4472788	46 (1.200)	5 (0.130)	4/306	NT	9.5%	coding (867/2856 nt)	valS	valyl‑tRNA synthetase
	?	CP009273	= 4472944	50 (1.330)					coding (711/2856 nt)	valS	valyl‑tRNA synthetase

AGATTCGTTACCTTTGGTATCGAACACCTGGGCGCTTTCACGGATATCGCCGTCAAAGGTCAGGATGTTGATCATCGGCAGGGCGTGACGTTTACCCACTTCATAGTCGTTAAAGTCGTGCGCCGGAGTGATTTTCACGCAGCCGGTGCCTTTTTCCATGTCGGCGTGTTCGTCGCCAACGATCGGAATACGACGGTTAACCAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGTAGTCGCGACCACCAGATAATCTTTACCGTCTGCGGTTTTCGCACCGTCAGCCAGCGGATAGCGGATGTGCCACATCGAACCTTTCGATTCGCGGTTTTCGACTTCCA‑GGTCAGAGATAGCGGTGCGCAGTTTCGGATCCCAGTTTACCAGGCGTTTGCCACGGTAAATCAGGTCTTCTTTATACAGACGAACGAAAACTTCTTTCACCGCATTGGACAGGC  >  CP009273/4472692‑4473212                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                              aGATTCGTTACCTTTGGTATCGAACACCTGGGCGCTTTCACGGATATCGCCGTCAAAGGTCAGGATGTTGATCATCGGCAGGGCGTGACGTTTACCCACTTCATAGTCGTTAAAGTCGTGCGCCGGAGTGATTTTCACGCAGCCGGTGCCTTTTTCCATGTCGGCGTGTTCGTCGCCAACGATCGGAATACGACGGTTAAACAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAAAGCGGAACTTCCGGGTTAACGGCCACCCCAggaa                                                                                                                                                                                                                                                         >  1:347794/1‑272 (MQ=255)                      gAACACCTGGGCGCTTTCACGGATATCGCCGTCAAAGGTCAGGATGTTGATCATCGGCAGGGCGTGACGTTTACCCACTTCATAGTCGTTAAAGTCGTGCGCCGGAGTGATTTCCACGCAGCCGGTGCCTTTTTCCATGTCGGCGTGTTCGTCGCCAACGATCGGAATACGACGGTTAACCAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGa                                                                                                                                                                                                                                     >  1:334804/1‑274 (MQ=255)                                   cTTTCATGGATATCGCCGTCAAAGGTCAGGATGTTGATCATCGGCAGGGCGTGACGTTTACCCACTTGATAGTAGTTAAAGTCGTGCGCCGGAGTGATTTTCACGCAGCCGGTGCCTTTTTCCGTGTCAGCGTGTTCGTCGCCAACGATCGGAATACGACGGTTAACCAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTa                                                                                                                                                                                                                                                                         <  1:39365/225‑1 (MQ=255)                                                           gTCATGATGTTTATCATCGGCAGTGCGTGACGTTTACCCACTTCATAGTCGTTAAAGTCGTGCGCCGGAGTGATTGTCACGCAGCCGGTTCCTTTTTCCATGTCGGCGTGTTCGTCGCCAACGATCGGAATACGACGGTTAACCAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGTAGTCGCGACCACCAGATAATCTTTACCGTCTGc                                                                                                                                                                                               <  1:206191/275‑1 (MQ=255)                                                                gATGTTGATCATCGGCAGGGCGTGACGTTTACCCACTTCATAGTCGTTAAAGTCGTGCGCCGGAGTGATTTTCACGCAGCCGGTGCCTTTTTCCATGTCGGCGTGTTCGTCGCCAACGATCGGAATACGACGGTTAATCAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAGCGCGGATCTTCCgg                                                                                                                                                                                                                                                                             <  1:367207‑M2/192‑3 (MQ=255)                                                                    ttGATCATCGGCAGGGCGTGACGTTTACCCACGTCATAGTCGTTAAAGTCGTGCGCCGGAGTGATTTTCACGCAGCCGGTGCCTTTTTCCATGTCGGCGTGTTCGTCGCCAACGATCGGAATACGACGGTTAATCAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTa                                                                                                                                                                                                                                                                         <  2:367201/192‑1 (MQ=255)                                                                                  ggCGTGACGTTTACCCACTTCATAGTCGTTAAAGTCGTGCGCCGGAGTGATTTTCACGCAGCCGGTGCCTTTTTCCATGTCGGCGTGTTCGTCGCCAACGATCGGAATACGACGGTTAACCAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCCGGGTTTCTGGCCGGGTAGGCGGGACCCCCCGATGAGCCTTTCCGTCTGCGGGTTTCGGACCCTcagcccgc                                                                                                                                                                         >  2:166493/1‑274 (MQ=255)                                                                                    cGTGACGTTTACCCACTTCATAGTCGTTAAAGTCGTGCGCCGGAGTGATTTTCACGCAGCCGGTGCCTTTTTCCATGTCGGCGTGTTCGTCGCCAACGATCGGAATACGACGGTTAACCAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTaa                                                                                                                                                                                                                                                                        >  1:452494/1‑177 (MQ=255)                                                                                        aCGTTTACCCACTTCATAGTCGTTAAAGTCGTGCGCCGGAGTGATTTTCACGCAGCCGGTGCCTTTTTCCATGTCGGCGTGTTCGTCGCCAACGATCGGAATACGACGGTTAACCAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTAACGGc                                                                                                                                                                                                                                                                    <  2:452487/177‑1 (MQ=255)                                                                                                   cTTCATAGTCGTTAAAGTCGTGCGCCGGAGTGATTTTCACGCAGCCGGTGCCTTTTTCCATGTCGGCGTGTTCGTCGCCAACGATCGGAATACGACGGTTAACCAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGTAGTcgcg                                                                                                                                                                                                                         >  1:99568/1‑209 (MQ=255)                                                                                                       aTAGTCGTTAAAGTCGTGCGCCGGAGTGATTTTCACGCAGCCGGTGCCTTTTTCCATGTCGGCGTGTTCGTCGCCAACGATCGGAATACGACGGTTAACCAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGTAGTCGCGacca                                                                                                                                                                                                                     <  2:99567/209‑1 (MQ=255)                                                                                                         aGTCGTTAAAGTCGTGCGCCGGTGTGATTTTCACGCAGCCGGTGCCTTTTTCCATGTCGGCGTGTTCGTCGCCAACGATCGGAATACGACTGTTAACCAGCGGCAGAATGACATATTTGCCAATCCGATCTTTGTAACGCGGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGTAGTCGCGACCACCAGATAATCTTTACCGTCTGCGGTTTTCGCACCGTCAGCCAGCGGATAGCGGATGTGCCACATCGaa                                                                                                                                                 <  1:354416/275‑1 (MQ=255)                                                                                                            cGTTAAAGTCGTGCGCCGGAGTGATTTTCACGCAGCCGGTGCCTTTTTCCATGTCGGCGTGTTCGTCGCCAACGATCGGAATACGACGGTTAACCAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCgggtaaacgtcacgccctgccgatgatcaacatcctgacctttgacggcgatatccgtgaaagcgcccaggtgttcgataccaaaggtaacgaatctgacgtttattacagcgaaaaccctgaagaggc                                                                                                                                              <  1:276725‑M2/275‑130 (MQ=255)                                                                                                            cGTTAAAGTCGTGCGCCGGAGTGATTTTCACGCAGCCGGTGCCTTTTTCCATGTCGGCGTGTTCGTCGCCAACGATCGGAATACGACGGTTAACCAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCgggtaaacgtcacgccctgccgatgatcaacatcctgacctttgacggcgatatccgtg                                                                                                                                                                                                                    <  1:149158‑M2/205‑60 (MQ=255)                                                                                                                aaaGTCGTGCGCCGGAGTGATTTTCACGCAGCCGGTGCCTTTTTCCATGTCGGCGTGTTCGTCGCCAACGATCGGAATACGACGGTTAACCAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCgggtaaacgtcacgccctgccgatgatcaacatcctgacctttgacggcgatatccgtgaaag                                                                                                                                                                                                                >  2:149157‑M2/1‑142 (MQ=255)                                                                                                                  aGTCGTGCGCCGGAGTGATTTTCACGCAGCCGGTGCCTTTTTCCATGTCGGCGTGTTCGTCGCCAACGATCGGAATACGACGGTTAACCAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGTAGTCGCGACCACCAGATAATCTTTACCGTCTGCGGTTTTCGCACCGTCAGCCAGCGGATAGCGGATGTGc                                                                                                                                                          <  1:332014/257‑1 (MQ=255)                                                                                                                                        cACGCAGCCGGTGCCTTTTTCCATGTCGGCGTGTTCGTCGCCAACGATCGGAATACGACGGTTAACCAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGttt                                                                                                                                                                                                                                          >  2:132232/1‑155 (MQ=255)                                                                                                                                        cACGCAGCCGGTGCCTTTTTCCATGTCGGCGTGTTCGTCGCCAACGATCGGAATACGACGGTTAACCAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGTAGTCGCGACCACCAGATAATCTTTACCGTCAGCGGTTTTCGCACCGTCAGCCAGCGGATAGCGGATGTGCCACATCGAACCTTTCGATTCGCGGTTTTCGAATTCCA‑ggg                                                                                                                 >  1:713013/1‑274 (MQ=255)                                                                                                                                        aaagCAGTCGTTGCCTTTTTCCATGTCGGCGTGTTCGTCGCCAACGATCGGAATACGACGGTTAACCAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTACCGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGTAGTCGCGACCACCAGATAATCTTTACCGTCTGCGGTTTTCGCACCGTCAGCCAGCGGATAGCGGATGTGCCACATCGAACCTTTCGATTCGCGGTTTTCGACTTCCA‑gg                                                                                                                  <  1:581546/271‑1 (MQ=255)                                                                                                                                         aCGCAGCCGGTGCCTTTTTCCATGTCGGCGTGTTCGTCGCCAACGATCGGAATACGACGGTTAACCAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGCAGTCGCGACCACCAGATAANCTTTACCGTCTGCGGTTTTCGCACCGTCAGCCAGCGGTTAGCGGATGTGCCACATCGACCCTTTCGATTCGCGGTTTTCGACTTCCA‑GGTc                                                                                                                >  1:551377/1‑275 (MQ=255)                                                                                                                                            cAGCCGGTGCCTTTTTCCATGTCGGCGTGTTCGTCGCCAACGATCGGAATACGACGGTTAACCAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTgg                                                                                                                                                                                                                                      <  1:132233/155‑1 (MQ=255)                                                                                                                                             aGCCGGTGCCTTTTTCCATGTCGGCGTGTTCGTCGCCAACGATCGGAATACGACTGTTAACCAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGTAGTCGCGACCACCAGATAATCTTTACCGTCTGCGGTTTTCGCACCGTCAGCCAGCGGATAGCGGATGTGCCACATCGAACCTTACGATTCGCGGTGTTCGACTTc                                                                                                                       >  1:376334/1‑265 (MQ=255)                                                                                                                                              gCCGGTGCCTTTTTCCATGTCGGCGTGTTCGTCGCCAACGATCGGAATACGACGGTTAACCAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGTAGTCGCGACCACCAGATAATCTTTACCGTCTGCGGTTTTCGCACCGTCAGCCAGCGGATAGCGGATGTGCCACATCGAACCTTTCGATTCGCGGTTTTCGACTTCCA‑GGTCAgaga                                                                                                           >  1:137569/1‑275 (MQ=255)                                                                                                                                                         cttctggtggggCGTGTTCGTCACCAACGAGCGGAATATGACGGTTAACCAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCGTCCGGGTTACCCGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGTAGTCGCGACCACCAGATAATCTTTACCGTCTGCGGTTTTCGCACCGTCAGCCAGCGGATAGCGGATGTGCCACATCGAACCTTTCGATTCGCGGTTTTCGACTTCCA‑GGTCAGAGATAGCGGTgcgc                                                                                                <  2:155560/265‑1 (MQ=255)                                                                                                                                                              aTGTCGGCGTGTTCGTCACCAACGTTCGGAATACGACGGTTAACCAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGTAGTCGCGACCACCAGATAATCTTTACCGTCTGCGGTTTTCGCACCGTCAGCCAGCGGATAGCGGATGTGCCACATCGAACCTTTCGATTCGCGGTTTTCGACTTCCA‑GGTCAGAGATAGCGGTGCGCAGttt                                                                                           <  1:90420/275‑1 (MQ=255)                                                                                                                                                                        gtTCGTCGCCAACGATCGGAATACGACGGTTAACCAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGTAGTCGCGACCGCCAGATAATCTTTACCGTCTGAGGTTTTCGCACCGTCAGCCagcggat                                                                                                                                                                     <  1:109039/192‑1 (MQ=255)                                                                                                                                                                           cgtcgCCAACGATCGGAATACGACGGTTAACCAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGTAGTCGCGACCACCAGATAATCTATACCGTCTGCGGTTTTCGCACCGTCAGCCAGCGGATAGCGGATGTGCCACATCGAACCTTTCGATTCGCGGTTTTCGACTTCCA‑GGTCAGAGATAGCGGTGCGCAGTTTCGGATCCCAGctt                                                                              >  1:676597/1‑275 (MQ=255)                                                                                                                                                                              cgCCAACGATCGGAATACGACGGTTAACCAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGTAGt                                                                                                                                                                                                                             >  1:269379/1‑130 (MQ=255)                                                                                                                                                                                  aaCGATCGGAATACGACGGTTAACCAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGTAGTcgcg                                                                                                                                                                                                                         <  2:269374/130‑1 (MQ=255)                                                                                                                                                                                           aaTACGACGGTTAACCAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGTAGTCGCGACCACCAGATAATCTTTACCGTCTGCGGTTTTCGCACCGTCAGCCAGCGGATAGCGGATGTGCCACATCGAACCTTTCGATTCGCGGTTTTCGACTTCCA‑GGTCAGAGATAGCGGTGCGCAGTTTCGGATCCCAGTTTACCAGGCGTTTGCCAc                                                              >  1:214417/1‑275 (MQ=255)                                                                                                                                                                                           aaTACGACGGTTAACCAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGATTCTGGACGGGGAGTCGGGacca                                                                                                                                                                                                                     >  2:454914/1‑125 (MQ=255)                                                                                                                                                                                             tatgacgGTTAACCAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGTAGTCGCGACCACCAGATAATCTTTACCGTCTGCGGTTTTCGCACCGTCAGCCAGCGGATAGCGGATGTGCCACATCGAACCTTTCGATTCGCGGTTTTCGACTTCCA‑GGTCAGAGATAGCGGTGCGCAGTTTCGGATCCCAGTTTACCAGGCGTTTGCCACgg                                                            <  1:437172/272‑1 (MQ=255)                                                                                                                                                                                               cgacgGTTAACCAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGTAGTCGCGACCACCAg                                                                                                                                                                                                                 <  1:454921/125‑1 (MQ=255)                                                                                                                                                                                                  cgtttAAACCGCGGCAGAATGACATATTTGCCAATCCTAGCTTTGTAACGCGGATCTTCCGGGTTAACGGCCACGCCCGTATCGCCCAGCAGGGTTTCTGGACGGGTAGTCGCGACCACCAGATAATCTTTACCGTCTGCGGTTTTCGCACCGTCAGCCAGCGGATAGCCGATGTGCCACATCGAACCTTTCGATTCGCGGTTTTCGACTTCCA‑GGTCAGAGATAGCGGTGCGCAGTTTCGGCTCCCAGTTTACCAGGCGTTTGCCACGGTAAAt                                                       <  2:93680/272‑1 (MQ=255)                                                                                                                                                                                                   ggTTAACCAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGTAGTcgc                                                                                                                                                                                                                          >  2:126141/1‑112 (MQ=255)                                                                                                                                                                                                     ttAACCAGCGGCAGACTGACATATGTGCAAATCAGATCTTTGTAACGCGGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGTAGTCGCGACCACCAGATAATCTTTACCGTCTGCGGTTTTCGCACCGTCAGCCAGCGGATAGCGGATGTGCCACATCGAANCTTTCGATTCGCGGTTTTCGAc                                                                                                                          >  1:498210/1‑206 (MQ=255)                                                                                                                                                                                                     ttAACCAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTaa                                                                                                                                                                                                                                                                        >  1:215630/1‑64 (MQ=255)                                                                                                                                                                                                       aaCCAGCGTCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGTAGTCGCGACCACCAGATAATCTTTACCGTCTGCGGTTTTCGCACCGTCAGCCAGCGGATAGCGGATGTGCCACATCGAACCTTTCGATTCGCGGTTTTCGACTTCCA‑GGTCAGAGATAGCGGTGCGCAGTTTCGGATCCCAGTTTACCAGGCGTTTGCCACGGTAAATCAGGt                                                  <  1:61718/275‑1 (MQ=255)                                                                                                                                                                                                       aaCCAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGTAGTCGCGacc                                                                                                                                                                                                                      <  1:126142/112‑1 (MQ=255)                                                                                                                                                                                                       aaCCAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGTAGTCGCGACCACCAGATAATCTTTACCGTCTGCGGTTTTCGCACCGTCAGCCAGCGGATAGCGGATGTGCCACATCGAACCTTTCGATTCGCGGTTTTCGACTTCCA‑GGTCAGAGATAGCGGTGCGCAGTTTCGGATCCCAGTTTACCAGGCGTTGGCCACGGt                                                           >  1:93681/1‑266 (MQ=255)                                                                                                                                                                                                         ccAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTAACGGc                                                                                                                                                                                                                                                                    <  2:215626/64‑1 (MQ=255)                                                                                                                                                                                                          cAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGTAGTCGCGACCACCAGATAATCTTTACCGTCTGCGGTTTTCGCACCGTCAGCCAGCGGATAGCGGATGTGCCACATCGAACCTTTCGATTCGCGGTTTTCGACTTCCA‑GGTCAGAGATAGCGGTGCGCAGTTTCGGATCCCAGTTTACCAGGCGTTTGCCACGGTAAATCAGGtctt                                               <  1:166496/275‑1 (MQ=255)                                                                                                                                                                                                             cGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCgggtaaacgtcacgccctgccgatgatcaacatcctgacctttgacgg                                                                                                                                                                                                                               <  1:257323‑M2/97‑49 (MQ=255)                                                                                                                                                                                                             cGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTaa                                                                                                                                                                                                                                                                        >  2:203968/1‑56 (MQ=255)                                                                                                                                                                                                              ggCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGTAGTCGCGACCACCAGATAAt                                                                                                                                                                                                            >  2:652384/1‑115 (MQ=255)                                                                                                                                                                                                               gCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGTAGTCGCGACCACCAGATAATCTTTACCGTCTGCGGTTTTCGCACCGTCAGCCAGCGGATAGCGGATGTGCCACATCGAACCTTTCGATTCGCGGTTTTCGACTTCCA‑GGTCAGAGATAGCGGTGCGCa                                                                                               >  2:79709/1‑222 (MQ=255)                                                                                                                                                                                                                 aGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCgggtaaacgtcacgccctgccgatgatcaacatcctgacctttgacggcgat                                                                                                                                                                                                                           >  2:257318‑M2/1‑45 (MQ=255)                                                                                                                                                                                                                 aGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTAACGGc                                                                                                                                                                                                                                                                    <  1:203972/56‑1 (MQ=255)                                                                                                                                                                                                                  gAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGTAGTCGCGACCACCAGATAATCttt                                                                                                                                                                                                        <  1:652393/115‑1 (MQ=255)                                                                                                                                                                                                                  gAATGACATATTTGCCAATAAGATCTTTGTAACGCGGATCTTCCGGGTTAACGGCTACGCCAGGATCGCCCAGCAGGGTTTCTGGACGGGTAGTCGCGACCACCAGATAATCTTTACCGTCTGCGTTTTTCGCACCGTCAGCCAGCGGATAGCGGGCGGGCCACATCGACACTTTCGATTCGTGTTCTTTCAGTTCCATGGTC‑GAAAAAGCTGGACGTCGTTGCGTCTCCCAGTTTACCAGGAGTTTGCTACTGTTTATCAGGTcttcttgtt                                         >  2:163039/1‑270 (MQ=255)                                                                                                                                                                                                                   aaTGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGTAGTCGCGACCACCAGATAATCTTTACCGTCTGCGGTTTTCGCACCGTCAGCCAGCGGATAGCGGATGTGCCACATCGAACCTTTCGATTCGCGGTTTTCGACTTCCA‑GGTCAGAGATAGCGGTGCGCAGttt                                                                                           <  1:79710/222‑1 (MQ=255)                                                                                                                                                                                                                                   aTCAGATCTTTGTAACGCGGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGTAGGCGCGACCACCAGATAATCTTTACCGTCTGCGGTTTTCGCACCGTCAGCCAGCGGATAGCGGATGTGCCACATCGAACCTTTCGATTCGCGGTTTTCGACTTCCA‑g                                                                                                                   <  2:189059/182‑1 (MQ=255)                                                                                                                                                                                                                                        gtCTTTGTAACGCGGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGTAGTCGCGACCACCAGATAATCTTTACCGTCTGCGGTTTTCGCACCGTCAGCCAGCGGATAGCGGATGTGCCACATCGAACCTTTCGATTCGCGGTTTTCGACTTCCA‑GGTCAGAGATAGCGGTGCGCAGTTTCGGATCCCAGTTTACCAGGCGTTTGCCACGGTAAATCAGGTCTTCTTTATACAGACGAACGAAAACTTCTTTCa                 <  1:102708/274‑1 (MQ=255)                                                                                                                                                                                                                                                  cgcgGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCTGCAGGGTTGCTGGACGGGTAGTCGCGACCACCAGATAATCTTTACCGTCTGCGGTTTTCGCACCGTCAGCCAGCGGATAGCGGATGTGCCACATCGAACCTTTCGATTCGCGGTTTTCGACTTCCA‑GGTCAGAGATAGCGGTGCGCAGTTTCGGATCCCAGTTTACCAGGCGTTTGc                                                                 <  1:406307/217‑1 (MQ=255)                                                                                                                                                                                                                                                  cgcgGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGTAGTCGCGACCACCAGATAATCTTTACCGTCTGCGGTTTTCGCACCGTCAGCCAGCGGATAGCGGATGTGCCACATCGAACCTTTCGATTCGCGGTTTTCGACTTCCA‑GGTCAGAGATAGCGGTGCGCAGTTTCGGATCCCAGTTTACCAGGCGTTTGCCACGGTAAATc                                                      >  2:546065/1‑228 (MQ=255)                                                                                                                                                                                                                                                   gcgGTTCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGTAGTCGCGACCACCAGATAATCTTTACCGTCTGCNGTTTTCGCACCGTCAGCCAGCGGATAGCGGATGTGCCACATCGAACCTTTCGATTCGCGGTTTTCGACTTCCA‑GGTCAGAGATAGCGGTGCGCAGTTTCGGATCCCAGTTTACCAGGCGTTTGCCACGGTAAATCAGGTCTTCTTTATACAGACGAACGAAAACTTCTTTCACCGCATTGGAc      <  1:526062/275‑1 (MQ=255)                                                                                                                                                                                                                                                    cgGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGTAGTCGCGACCACCAGATAATCTTTACCGTCTGCGGTTTTCGCACCGTca                                                                                                                                                                               >  2:77996/1‑106 (MQ=255)                                                                                                                                                                                                                                                    cgGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGTAGTCGCGACCACCAGATAATCTTTACCGTCTGCGGTTTTCGCACCGTCAGCCAGCGGATAGCGGATGTGCCACATCGAACCTTTCGATTCGCGGTTTTCGACTTCCA‑GGTCAGAGATAGCGGTGCGCAGTTTCGGATCCCAGTTTACCAGGCGTTTTCAACGGTAAATAAGGTCTTCATTATACAGACGAACGAAAACTTCTTTctacgaagatgat      >  2:102707/1‑262 (MQ=255)                                                                                                                                                                                                                                                      gATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGTAGTCGCGACTACCAGATAATCTTTACCGTCTGCGGTTTTCGCACCGTCAGCCAGCGGATAGCGGATGTGCCACATCGAACCTTTCGATTCGCGGTTTTCGACTTCCA‑GGTCAGAGATAGCGGTGCGCAGTTTCGGATCCCAGTTTACCAGGCGTTTGCCACGGTAAATCAGGt                                                  <  1:546074/228‑1 (MQ=255)                                                                                                                                                                                                                                                       aTCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGTAGTCGCGACCACCAGATAATCTTTACCGTCTGCGGTTTTCGCACCGTCAGCCAGCGGATAGCGGATGTGCCACATCGAACCTTTCGATTCGCGGCTTTCGACTTCCA‑GGTCAGAGCTAGCGGTGCGCAGGTTCGGATCCCAGGTTACCAGGCGTTTGCCACGGTAAATCAGGTATTCTTTATAAAGACAGACGAAAACTTATTTCAACGCATTGGAcggtc  >  2:699770/1‑271 (MQ=255)                                                                                                                                                                                                                                                        tCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGTAGTCGCGACCACCAGATAATCTTTACCGTCTGCGGTTTTCGCACCGTcagcca                                                                                                                                                                           <  1:77997/106‑1 (MQ=255)                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                              AGATTCGTTACCTTTGGTATCGAACACCTGGGCGCTTTCACGGATATCGCCGTCAAAGGTCAGGATGTTGATCATCGGCAGGGCGTGACGTTTACCCACTTCATAGTCGTTAAAGTCGTGCGCCGGAGTGATTTTCACGCAGCCGGTGCCTTTTTCCATGTCGGCGTGTTCGTCGCCAACGATCGGAATACGACGGTTAACCAGCGGCAGAATGACATATTTGCCAATCAGATCTTTGTAACGCGGATCTTCCGGGTTAACGGCTACGCCAGTATCGCCCAGCAGGGTTTCTGGACGGGTAGTCGCGACCACCAGATAATCTTTACCGTCTGCGGTTTTCGCACCGTCAGCCAGCGGATAGCGGATGTGCCACATCGAACCTTTCGATTCGCGGTTTTCGACTTCCA‑GGTCAGAGATAGCGGTGCGCAGTTTCGGATCCCAGTTTACCAGGCGTTTGCCACGGTAAATCAGGTCTTCTTTATACAGACGAACGAAAACTTCTTTCACCGCATTGGACAGGC  >  CP009273/4472692‑4473212

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.