New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 4514662	60 (1.560)	5 (0.130)	5/310	NT	6.8%	coding (166/906 nt)	yjhH	putative lyase/synthase
	?	CP009273	= 4514890	78 (2.060)					coding (731/789 nt)	yjhI	putative DNA‑binding transcriptional regulator

CGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTGGGCTGTATTCATTTGGCTAAATTCACCACCGGTACCCAGATAAAACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCGTCACGATGAAACGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGA  >  CP009273/4514617‑4515132                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                   cGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTGGGCTGTATTCATTTGGCTAAATTCACCACCGGTACCCAGATAAAACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCGTCACGATGAAACGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTg                                                                                                                                                                                                                                                   >  1:131414‑M2/1‑274 (MQ=255)         agggTTACAGCTTTTTCGGCGAGTGCCATGCGCTGGGCTGTATTCATTTGGCTAAATTCACCACCGGTACCCAGATAAAACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCGTCACGATGAAACGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAgcg                                                                                                                                                                                                                                            <  1:427507/272‑1 (MQ=255)               aCAGCTTCTTCGGCGAGTGCCATGCGCTGGGCTGTATTCATTTGGCTAAATTCACCACCGGTACCCAGATAAAACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCGTCACGATGAAAAGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTcc                                                                                                                                                                                                                                     >  2:171995/1‑275 (MQ=255)                   cttcttCGGCGAGTGCCATGCGCTGGGCTGTATTCATTTGGCTAAATTCACCACCGGTACCCAGATAAAACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCGTCACGATGAAACGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAg                                                                                                                                                                                                                                 <  1:299765/275‑1 (MQ=255)                      cttcGGCGAGTGCCATGCGCTGGGCTGTATTCATTTGGCTAAATTCACCACCGGTACCCAGATAAAACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCGTCACGATGAAACGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTAAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCgg                                                                                                                                                                                                                                   >  1:670271/1‑270 (MQ=255)                      cttcGGCGAGTGCCATGCGCTGGGCTGTATTCATTTGGCTAAATTCACCACCGGTACCCAGATAAAACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCGTCACGATGAAACGTGCTGGATACCGGTGGAATAATGCAGCTGAATTTTTTCATTACCTCAATTTCCTTTTCGTAAGTGCTCATTTTCGTTTTTGTTACCAAGCCCATATTAAANTTTCTCATACCATTTcctacctt                                                                                                                                                                                                                               >  2:427500/1‑268 (MQ=255)                                    aTGCCCTGTGCTGTATTCCTTTGTCTCAATTCACCACCGGTACCCAGATAAAACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCGTCACGATGAAACGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGt                                                                                                                                                                                                                <  2:655180/275‑1 (MQ=255)                                                     cATTTGTCTAAATTCACCACCGGTACCCAGATCAAACCGACCGTCGACTCCTTTATTTATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCGTCACGATGAAACGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTAGATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAAGTCCAGATAGCTGTCTATCTTATTTCCTGaa                                                                                                                                                                                               <  2:321075/275‑1 (MQ=255)                                                        ttGGCTAAATTCACCACCGGTACCCAGATAAAACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCGTCACGATGAAACGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATaa                                                                                                                                                                                            >  1:110880/1‑275 (MQ=255)                                                           gCTAAATTCACCACCGGTACCCAGATAAAACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCGTCACGATGAAACGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCCGCCCATATGATCTTTGCTCAGAGCATTTCCGGAGCAATTCCCGATAGATGTCTCCCTTTTTTCCTGAATCAAc                                                                                                                                                                                          >  2:220985/1‑274 (MQ=255)                                                           gCTAAATTCACCACCGGTACCCAGATAAAACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCGTCACGATGAAACGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGTATCAATTCAAGATATNTTTTTATCTTATTTCCtttatttatt                                                                                                                                                                                         >  2:465357/1‑266 (MQ=255)                                                                                cAGATAAAACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCGTCACGATGAAACGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCATGATAGCTGTCTATCTTATTTCCTGAATCAAAGACCGGATACCCCGCAAGTg                                                                                                                                                                      >  2:141471/1‑273 (MQ=255)                                                                                   aTAAAACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCGTCACGATGAAACGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCAAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCAAAAAAgagagaat                                                                                                                                                                 >  1:172180/1‑273 (MQ=255)                                                                                   aTAAAACAGCCCCTCGTCCCCTTTATTTATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCCTCACTATGAAACGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGGATTTCCTGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTgaga                                                                                                                                                                   <  2:667179/273‑1 (MQ=255)                                                                                      aaaCAGCCCGTCGACTCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCGTCACGATGANACGTGCTGNATACCGGTGGAACAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGTATAAACTTCCGGATCGCCAGAAAGTGAGATTGCa                                                                                                                                                              <  1:465364/275‑1 (MQ=255)                                                                                            cccGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCGTCACGATGAAACGTGCTGGATACCGGTGGAATAATGCCTCTGAATTTTTTCATTACCTCAGTTGCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTTAGCGCATTTCCTGATCAATCCCAGATAGCTGTCTATCTTATTTCCCTAATCAAATACCGGACCCCCAGAACAGGAGATTGCATAGTTa                                                                                                                                                        >  1:25583/1‑275 (MQ=255)                                                                                             ccGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCGTCACGATGAAACGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTaa                                                                                                                                                       <  1:269133/275‑1 (MQ=255)                                                                                             ccGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCGTCACGATGAAACGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTACTTTTCGTTTCNGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCTAGATAGCTGTCTATCTTATTTCCTGAATAAACAACCGGATCGCCAGAAAGTAAGATTGCATAGTTac                                                                                                                                                       >  1:667188/1‑274 (MQ=255)                                                                                             ccGGCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCGTCACGATGAAACGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTaa                                                                                                                                                       <  1:220990/275‑1 (MQ=255)                                                                                               gTCGAACCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCGTCACGATGAAACGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAAct                                                                                                                                                     <  2:79951/275‑1 (MQ=255)                                                                                                  gACCCCTTTATGAAGCAGGAAGTCGGCAACGTCGCGCATTGCCTTTTTATCAAGGGTTCCGTCACGATGAAACGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTGTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTAGCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAAct                                                                                                                                                     <  1:262989/272‑1 (MQ=255)                                                                                                     cccTTTATTAATCAGGAAGTCGGCAACTGCGCGCATTGCCTTTTTATCAATGGTTCCGTCACGATGAAACGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATGACCTCAGTTTCCTTGTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATAGTTGCTCAGCGCATTTCCGGAGCAATTCCATATAGCTGTCTATCTTATTTCCTGaa                                                                                                                                                                                               <  1:138576/227‑1 (MQ=255)                                                                                                           tttaATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCGTCACGATGAAACGTGCTGGATACCGGTGGAATAATGNCGCTGAATTTTTTCATTACATCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATAc                                                                                                                                            <  1:558451/271‑1 (MQ=255)                                                                                                              aaTCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCGTCACGATGAAACGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCCCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGATCAATTCAAGATAGCTGTCTATCTTATTTACTGAATAAACAACCGCATCAACAGAAAGTGTGTATTTTTAGTTAACTCATTTATACattt                                                                                                                                        >  2:490328/1‑271 (MQ=255)                                                                                                                 cAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCGTCACGATGAAACGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCAGATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTg                                                                                                                                                  >  1:634605/1‑260 (MQ=255)                                                                                                                  aGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCGTCACGATGAAACGTGCTGGATCCCGGTNGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCTGAAAGTGAGATTGCATAGTTAAct                                                                                                                                                     <  1:490335/256‑1 (MQ=255)                                                                                                                     aaGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCGTCACGATGAAACGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTtat                                                                                                                                              <  2:634596/260‑1 (MQ=255)                                                                                                                      aGTCTGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCGTCACGATGAAACGTGCTTGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGAGCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCgg                                                                                                                              <  1:141472/275‑1 (MQ=255)                                                                                                                        tctgtcaCTTCGCGCATTGCCTTTTTTTCAAGGGTTCCGTCACGATTAAACGTGCTTGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCa                                                                                                                            <  2:172177/269‑1 (MQ=255)                                                                                                                                      cATTGCCTTTTTATCAAGGGTTCCGTCACGATGAAACGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTtat                                                                                                                                              <  1:237466/243‑1 (MQ=255)                                                                                                                                         tGCCTTTTTATCAAGGGTTCCGTGGCGACTAAACGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATNTCCTGAATAAACTACCGGATCGc                                                                                                                                                                               >  1:493167/1‑207 (MQ=255)                                                                                                                                             tttttATCAAGGGTTCCGTCACGATGAAACGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGa                                                                                                                                                                           <  2:493160/207‑1 (MQ=255)                                                                                                                                                               tCACGATGAAACGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTgcccagcgcatggcactcgccgaagaagctgtaaccattgtcgacgggcgagtgccggtattgattggcgtcggttccccttccactgacgaagcggtcaaactggcgcagcatgcgcaagcctacggcgctgatggtatcgtcgccatcaacccctac                                                                                     >  1:328815‑M2/1‑116 (MQ=255)                                                                                                                                                                cACGATGAAACGTGATGGATAACGGTTGAATTATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGc                                                                                                                                                                               <  2:560240/184‑1 (MQ=255)                                                                                                                                                                         aCGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGa                                                                                                                                                                                                                                  >  1:278208/1‑124 (MQ=255)                                                                                                                                                                             gCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCaa                                                                                                                                                                                                                              <  2:278203/124‑1 (MQ=255)                                                                                                                                                                                ggATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATCTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCAGAGGTTGATTCTGCGTTGTCTATGGCCCATCCCCGa                                                                    <  1:387809/275‑1 (MQ=255)                                                                                                                                                                                      cGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGAttc                                                                                             >  1:504470/1‑244 (MQ=255)                                                                                                                                                                                        gTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCa                                                                                                                                                              >  1:192962/1‑177 (MQ=255)                                                                                                                                                                                          ggAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCg                                                                                         <  2:504463/244‑1 (MQ=255)                                                                                                                                                                                           gAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCa                                                                                                                                                              >  1:460458/1‑174 (MQ=255)                                                                                                                                                                                           gAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATa                                                                                                                                  >  2:597571/1‑202 (MQ=255)                                                                                                                                                                                            atttagtttgctgaattttTTCATTCCCCCATTTTCCTTTTCGTAGCTGCTCATTTGCGTTTCTGTATCCCAGCCCATATGATCTTTgcccagcgcatggcactcgccgaagaagctgtaaccattgtcgacgggcgagtgccggtattgattggcgtcggttccccttccactgacgaagcggtcaaactggcgcagcatgcgcaagcctacggcgctgatggtatcgtcgccatcaacccctactactggaaagtcgcaccacgaaatcttga                                                        >  2:82424‑M2/10‑87 (MQ=255)                                                                                                                                                                                            aataatGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGt                                                                                                                                                          <  2:192959/177‑1 (MQ=255)                                                                                                                                                                                             ataatGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATc                                                                                                                                                                                 >  1:80526/1‑153 (MQ=255)                                                                                                                                                                                               aatGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCgg                                                                                                                              <  1:597580/202‑1 (MQ=255)                                                                                                                                                                                               aatGCCGCTGAATTTTTTCATTACCGCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGt                                                                                                                                                          <  2:460451/174‑1 (MQ=255)                                                                                                                                                                                                atGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTcc                                                                                                                                                                                                                                     >  2:93322/1‑98 (MQ=255)                                                                                                                                                                                                 tGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCa                                                                                                                                                                             <  2:80525/153‑1 (MQ=255)                                                                                                                                                                                                   ccGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTgcacagcgcatggcactcgccgaagaagctgtaaccattgtcgacgggcgagtgccggtattgattggcgtcggttccccttccactgacgaagcggtcaaactggcgcagcatgcgcaagc                                                                                                                          <  2:199803‑M2/202‑123 (MQ=255)                                                                                                                                                                                                   ccGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATc                                                                                                                                                                                                           >  1:48669/1‑121 (MQ=255)                                                                                                                                                                                                    cGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAg                                                                                                                                                                                                                                 <  1:93323/98‑1 (MQ=255)                                                                                                                                                                                                    cGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCa                                                                                                        <  1:36806/219‑1 (MQ=255)                                                                                                                                                                                                      cTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTgcccagcgcatggcactcgccgaagaagctgtaaccattgtcgacgggcgagtgccggtattgattggcgtcggttccccttccactgacgaagcggtcaaactggcgcagcatgcgcaagcctacggcgctgatggtatcgtcgccatcaacccctactactggaaagtcgcaaccagaaatcttgaagactaatac                                              <  1:82425‑M2/275‑199 (MQ=255)                                                                                                                                                                                                      cTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCTCATCCCCAAAGGCGTGTTTTTTGTAAttctt                                              >  1:350891/1‑275 (MQ=255)                                                                                                                                                                                                       tGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTgcccagcgcatggcactcgccgaagaagctgtaaccattgtcgacgggcgagtgccggtattgattggcgtcggttccccttccactgacgaagcggtcaaactggcgcagcatgcgcaagcctac                                                                                                                      >  1:199806‑M2/1‑76 (MQ=255)                                                                                                                                                                                                       tGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTAt                                                                                                                                                                                                       <  2:48669/121‑1 (MQ=255)                                                                                                                                                                                                                                     cGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCt                                                                                                                                                                                                                  >  2:1774/1‑80 (MQ=255)                                                                                                                                                                                                                                         aGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCt                                                                                                                                                                                                              <  1:1774/80‑1 (MQ=255)                                                                                                                                                                                                                                           tGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGcgcg          <  1:171998/274‑1 (MQ=255)                                                                                                                                                                                                                                             cTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACat                                                                                                                                          >  1:16306/1‑144 (MQ=255)                                                                                                                                                                                                                                                 ttttCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTg                                                                                                                                      <  2:16306/144‑1 (MQ=255)                                                                                                                                                                                                                                                  tttCGATTGTTTATCCCAGCCCATTTTATATTTGCTCATCGCATTTCCGGAGCAATTCCATATAGCTGTCTATCTTATTTCCTAAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGa  <  2:110879/275‑1 (MQ=255)                                                                                                                                                                                                                                                                    gCCCATATGATATTTGCTCAGCGCATTTCCGGAGTAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGaa                                                                                                                                                                          >  1:481051/1‑89 (MQ=255)                                                                                                                                                                                                                                                                    gCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAg                                                                                                                                                                                                                        >  2:697179/1‑43 (MQ=255)                                                                                                                                                                                                                                                                     cccATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAg                                                                                                                                                           >  2:243738/1‑103 (MQ=255)                                                                                                                                                                                                                                                                     cccATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGtt                                                                                                                                                         >  2:343819/1‑105 (MQ=255)                                                                                                                                                                                                                                                                     cccATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACGTATTGAATa                                                                                                                                  >  2:243062/1‑128 (MQ=255)                                                                                                                                                                                                                                                                     cccATATGATATTTGATCAGCACAATTCTCGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGtt                                                                                                                                                         >  1:491701/1‑105 (MQ=255)                                                                                                                                                                                                                                                                        atatGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAg                                                                                                                                                                                                                    <  1:697188/43‑1 (MQ=255)                                                                                                                                                                                                                                                                        atatGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTg                                                                                                                                                                      <  2:481044/89‑1 (MQ=255)                                                                                                                                                                                                                                                                         tatGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGAt                                                                                                                                                                                                                      >  2:483010/1‑40 (MQ=255)                                                                                                                                                                                                                                                                         tatGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGt                                                                                                                                                                                                                >  1:632295/1‑46 (MQ=255)                                                                                                                                                                                                                                                                         tatGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGaa                                                                                                                                                                          >  2:325888/1‑84 (MQ=255)                                                                                                                                                                                                                                                                         tatGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTgaga                                                                                                                                                                   >  2:452604/1‑91 (MQ=255)                                                                                                                                                                                                                                                                         tatGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTaa                                                                                                                                                       <  1:243743/103‑1 (MQ=255)                                                                                                                                                                                                                                                                         tatGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAAct                                                                                                                                                     <  2:491694/105‑1 (MQ=255)                                                                                                                                                                                                                                                                         tatGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAAct                                                                                                                                                     <  1:343825/105‑1 (MQ=255)                                                                                                                                                                                                                                                                         tatGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACGTATTGAATACCgg                                                                                                                              <  1:243067/128‑1 (MQ=255)                                                                                                                                                                                                                                                                         tatGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCTATCCCCGAAGGCGTGTTTTTTGTCATTCTTCCAGAAACAATTTTTTATCGGTAAATGTAt                >  1:361834/1‑238 (MQ=255)                                                                                                                                                                                                                                                                             atatTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCt                                                                                                                                                                                                                  <  1:483017/40‑1 (MQ=255)                                                                                                                                                                                                                                                                             atatTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTAt                                                                                                                                                                                                            <  2:632286/46‑1 (MQ=255)                                                                                                                                                                                                                                                                             atatTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTg                                                                                                                                                                      <  1:325894/84‑1 (MQ=255)                                                                                                                                                                                                                                                                             atatTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGc                                                                                                                                                               <  1:452611/91‑1 (MQ=255)                                                                                                                                                                                                                                                                               atTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCg                                                                                                                                                                                     >  2:159265/1‑67 (MQ=255)                                                                                                                                                                                                                                                                               atTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATa                                                                                                                                  >  2:524815/1‑118 (MQ=255)                                                                                                                                                                                                                                                                               atTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATa                                                                                                                >  2:290734/1‑136 (MQ=255)                                                                                                                                                                                                                                                                               atTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGAttc                                                                                             >  1:692706/1‑155 (MQ=255)                                                                                                                                                                                                                                                                                 ttGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATc                                                                                                                                                                                 >  1:181502/1‑69 (MQ=255)                                                                                                                                                                                                                                                                                  tGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGtt                                                                                                                                                         >  2:49974/1‑92 (MQ=255)                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                   CGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTGGGCTGTATTCATTTGGCTAAATTCACCACCGGTACCCAGATAAAACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCGTCACGATGAAACGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGA  >  CP009273/4514617‑4515132

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.