New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	1899 =	81 (2.110)	8 (0.220)	6/298	NT	11.1%	coding (1563/2463 nt)	thrA	Bifunctional aspartokinase/homoserine dehydrogenase 1
	?	CP009273	2042 =	51 (1.400)					coding (1706/2463 nt)	thrA	Bifunctional aspartokinase/homoserine dehydrogenase 1

CTGGAGCAACTGAAGCGTCAGCAAAGCTGGCTGAAGAATAAACAT‑ATCGACTTACGTGTCTGCGGTGTTGCCAACTCGAAGGCTCTGCTCACCAATGTACATGGCCTTAATCTGGAAAACTGGCAGGAAGAACTGGCGCAAGCCAAAGAGCCGTTTAATCTCGGGCGCTTAATTCGCCTCGTGAAAGAATATCATCTGCTGAACCCGGTCATTGTTGACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCATCAGTTGCGTTATGCGGCGGAAAAATCGCGGCGTAAATTCCTCTATGACACCAACGTTGGGGCTGGATTACCGGTTATTGAGAACCTGCAAAATCTGCTCAATGCAGGTGATGAATTGATGAAGTTCTCCGGCATTCTTTCTGGTTCGCTTTCTTATATCTTCGGCAAGTTAGACGAAGGCATGAGTTTCTCCGAGGCGACCACGCTGGCG  >  CP009273/1777‑2316                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                                   ctgGAGCAACTGAAGCGTCAGCAAAGCTGGCTGAAGAATAAACAT‑ATCGACTTACGTGTCTGCGGTGTTGCCAACTCGACGGCTCTGCTCACCAATGTACATGGCCTTAATCTGGAAAACTGGCAGGAAGAACTGGCGCAAGCCAAAGAGCCGTTTAATCCCGGGCGCTTAATTCGCCTCGTGAAAGAATATCATCGGCTGCACCCGGTCATTGTTGACTGCACTTCCAGCCAGGCAGTGGCGTCTCACTATGTCGAATGCCCGTGCGACGGtt                                                                                                                                                                                                                                                                            >  2:16212/1‑274 (MQ=255)    caGCAACGGAGGCGACAGCAAACCGGGCTCAAGCAT‑ACCATGCTCGCCTTCGTTGGCGGCGGTGTTTCCAACTCGAAGGCTCTGCTCACTGATGTACATTGCCTTAATCGGGAGCACTGGCAGGAACAACGGGCGCAAGCCAAAGAGCCGTTTAATCTCGGGCGCTTACTTCGCCTCGTGTAAGAATATCATCTGCTGAACCCGGTCATTGTTGACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCa                                                                                                                                                                                                                                                                        <  2:11152/274‑1 (MQ=255)                    aGCAAAGCTGGCTGAAGAATAAACAT‑ATCGACTTACGTGTCTGCGGTGTTGCCAACTCGAAGGCACTGCTCACCAATGTACATGGCCTTAATCTGGAAAACTGTCAGGAAGAACTGGCGCAAGCCAAAGAGCCGTTTAATCTCGGGCGCTTAATTCGCCTCGTGAAAGAATATCATCTGCTGAACCCGTTCATTGTTTACTGCATATCCAGCAAGGCAGTGGCGGATAAATATACCGACTTCACGCGCTAAGGTTTCCACGTTTTCccgccgca                                                                                                                                                                                                                                                         >  2:672071/1‑272 (MQ=255)                                  aaaaaTAAAAAT‑AAGGATTTACGGGTCTGCGGTTTTGCCAACTCGAAGGTTCTGCTAACAAATGTAAATGGACTTAATCGGGAAAACTGGAAGGAAGAACGGGCGCAAGCCAAAGAGCCGTTTAATCTCGGGCGCTTAATTCGCATCGTGAAAGAATATCATATGCTGAACCCGGTCATTGTTGACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGGTGTCACGCCGAACAAAAAGGCTAacac                                                                                                                                                                                                                                          <  2:573880/272‑1 (MQ=255)                                       tAAACAT‑ATCGACTTACGTGTCTGCGGTGTTGCCAACTCGAAGGCTCTGCTCACCAATGTACATGGCCTTAATCTGGAAAACNGGCAGGAANAACTGGCGCAAGTCAAAGAGCCGTTTAATCTCGGGCGCTTAATTCGCCTCGTGAAAGAATATCATCTGCTGAACCCGGTCATTGTTGACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCAAGCCGAACAAAAAGGCCAACACCtcgt                                                                                                                                                                                                                                     <  1:463625/275‑1 (MQ=255)                                               atCGCCATACGTGTCTGAGGGGTTGCCAACTCGAAGGCCCTGCTCAGCAATGTACGTGGCCTTAATCTGTAAAACTGGCAGGAAGAACTGGCGAAAGCCAAAGAGCCGTGTAATCTCGGGCGCTTAATTCGCCTCGTGAAAGAATCTCATCTGCTGAACCCGGTCATTGTTGACTGCACTTCACTCCAGGCAGTGGCGGATCAATATTCAGACATCCCTCTCGAAATTTGCCCCGTAGCAACACAGAACANCAATCCCAacacacaataaaacta                                                                                                                                                                                                                              >  2:424265/1‑263 (MQ=255)                                                tCGACTTACGTGTCTGCGGTGTTGCCAACTCGAAGGCTCTGCTCACCAATGTACATGGCCTTAATCTGGAAAACTGGCAGGAAGAACTGGCGCAAGCCAAAGAGCCGTTTAATCTCGGGCGCTTAATTCGCCTCGTGAAAGAATATCATCTGCTGAACCCGGTCATTGTTGACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAAAAAAAAGGCCAAAACCTCGTCGATGGAt                                                                                                                                                                                                                             >  1:269342/1‑275 (MQ=255)                                                   aCTTACGTGTCTGCGGTGTTGCCAACTCGAAGGCTCTGCTCACCAATGTACAGGGCCTTAATCTGGAAAACTGGCAGGAAGAACTGGCGCAAGCCAAAGAGCCGTTTAATCTCGGGCGCTTAATTCGCCTCGTGAAAGAATAGCATCTGCTGAACCCGGTCATTGTTGACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTATCACGTTGTCACGCCg                                                                                                                                                                                                                                                           <  1:424272/242‑1 (MQ=255)                                                              tGCGGTGTTGCCAACTCGAAGGCTCTGCTCACCAATGTACATGGCCTTAATCTGGAAAACTGGCAGGAAGAACTGGCGCAAGCCAAAGAGCCGTTTAATCTCGGGCGCTTAATTCGCCTCGTGAAAGAATATCATCTGCTGAACCCGGTCATTGTTGACTGCACTTCCAGCAAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGCAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCATCAGtt                                                                                                                                                                                                               >  1:68197/1‑275 (MQ=255)                                                                  gtgtTGCCAACTCGAAGGCTCTGCTCACCAATGTACATGGCCTTAATCTGGAAAACTGGCAGGAAGAACTGGCGCAAGCCAAAGAGCCGTTTAATCTCGGGCGCTTAATTCGCCTCGTGAAAGAATATCATCTGCTGAACCCGGTCATTGTTGACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACaaa                                                                                                                                                                                                                                                     <  1:19889/233‑1 (MQ=255)                                                                             tCGAAGGCTCTGCTCACCAATGTACATGGCCTTAATCTGGAAAACTGGCAGGAAGAACTGGCGCAAGCCAAAGAGCCGTTTAATCTCGGGCGCTTAATTCGCCTCGTGAAAGAATATCATCTGCTGAACCCGGTCATTGTTGACTGCACTTCCAGCCAGGCATTGGCGGATCAATATGCCCACTTCCTGCCCGACGGTTTCCACGTTGTCACCCCGAACAAAAAGCCCAACACCTCGTCGACGCATTACTACCATCATATTCTTTATgcgaattg                                                                                                                                                                                                >  2:597390/1‑270 (MQ=255)                                                                                                   tACATGGCCTTAATCTGGAAAACTGGCAGGAAGAACTGGCGCAAGCCAAAGAGCCGTTTAATCTCGGGCGCTTAATTCGCCTCGTGAAAGAATATCATCTGCTGAACCCGGTCATTGTTGACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCATCAGTTGCGTTATGCGGCGGAAAAATCGCGGCGTAAATTc                                                                                                                                                                             >  1:86655/1‑272 (MQ=255)                                                                                                    agtgggCTTTAGTCTCGAAAACCGGCAGGAAGAACTGGCGCAAGCCAAAGAGCCGTTTAATCTCGGGCGCTTAATTCGCCTCGTGAAAGAATATCATCTGCTGAACCCGGTCATTGTTGACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCATCAGTTGCGTTATGCGGCGGAAAAATCGCGGCGTAAATTCctct                                                                                                                                                                         <  2:86654/271‑1 (MQ=255)                                                                                                          ctttAATCTGGAAAACTGGCAGGAAGCACTGGCGCAAGCCAAAGAGCCGTTTAATCTCGGGCGCTTAATTCGCCTCGTGAAAGAATATCATCTGCTGAACCCGGTCATTGTTGACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCATCAGTTGCGTTATGCGGCGGAAAAATCGCGGCGTAAATTc                                                                                                                                                                             <  1:388158/263‑1 (MQ=255)                                                                                                           ctgatgcTGGANAACGGGCAGTAAGAACTTGCGCAAGCCAACTAGCCGGTTATTCTCGCGTGCTTAATTCGCCTCGTGAAAGAATATCATCTGCTGAACCCGGTCATTGTTGACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCATCAGTTGCGTTATGCGGCGGAAAAATCGCGGCGTAAATTCCTCTATGacac                                                                                                                                                                  <  2:68196/269‑1 (MQ=255)                                                                                                           cTTAATCTGGAAAACTGGCAGGAAGAACTGGCGCAAGCCAAAGAGCCGTTTAATCTCGGGCGCTTAATTCGCCTCGTGAAAGAATATCATCTGCTGAACCCGGTCATTGTTGACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAgg                                                                                                                                                                                                                                                 >  1:371873/1‑196 (MQ=255)                                                                                                            ttAATCTGGAAAACTGGCAGGAAGAACTGGCGTAAGCCAAAGAGCCGTTTAATCTCGGGCGCTTAATTCGCCTCGTGAAAGAATATCGTCTGCTGAACCCGGTCATTGTTGACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGa                                                                                                                                                                                                                                  <  1:380866/210‑1 (MQ=255)                                                                                                            ttAATCTGGAAAACTGGCAGGAAGAACTGGCGCAAGCCAAAGAGCCGTTTAATCTCGGGCGCTTAATTCGCCTCGTGAACGAATATCATCTGCTGAACCCGGTCATTGTTGACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCATCAGTTGCGTTATGCGGCGGAAAAATCGCGGCGTAAATTCCTCTATGACAcc                                                                                                                                                                 <  1:672080/275‑1 (MQ=255)                                                                                                               aTCTGGAAAACTGGCAGGAAGAACTGGCGCAAGCCAAAGAGCCGTTTAATCTCGGGCGCTTAATTCGCCTCGTGAAAGAATATCATCTGCTGAACCCGGTCATTGTTGACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCaa                                                                                                                                                                                                                                             <  2:371867/196‑1 (MQ=255)                                                                                                                 atGGAAAACTGGCGTGCAGAACACGCGCAAGCCAAAGAGCCGTTTAAGCTCGGGCGCTTAATTCGCCTCGTGAAAGAATATCATCTGCTGAACCCGGTCATTGTTGACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCAt                                                                                                                                                                                                                    <  1:175655/218‑1 (MQ=255)                                                                                                                            GCAGGAAGAACTGGCGCAAGCCAAAGAGCCGTTTAATCTCGGGCGCTTAATTCGCCTCGTGAAAGAATATCATCTGCTGAACCCGGTCATTGTTGACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATtacta                                                                                                                                                                                                                        <  2:552329‑M1/204‑1 (MQ=255)                                                                                                                                GAAGAACTGGCGCAAGCCAAAGAGCCGTTTAATCTCGGGCGCTTAATTCGCCTCGTGAAAGAATATCATCTGCTGAACCCGGTCATTGTTGACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCAt                                                                                                                                                                                                                    >  1:552338‑M1/1‑204 (MQ=255)                                                                                                                                          cgcAAGCCAAAGAGCCGTTTAATCTCGGGCGCTTAATTCGCCTCGTGAAAGAATATCATCTGCTGAACCCGGTCATTGTTGACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACaaaa                                                                                                                                                                                                                                                    >  2:17355/1‑162 (MQ=255)                                                                                                                                           gcAAGCCAAAGAGCCGTTTAATCTCGGGCGCTTAATTCGCCTCGTGAAAGAATATCATCTGCTGAACCCGGTCATTGTTGACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCATCAGTTGCGTTATGCGGCGGAAAAATCGCGTCGTAAATTCCTCTATGACACCAACGTTGGGGCTTGATTACCGGTTATTgag                                                                                                                                   >  1:99835/1‑274 (MQ=255)                                                                                                                                              aGCCAAAGAGCCGTTTAATCTCGGGCGCTTAATTCGCCTCGTGAAAGAATATCATCTGCTGAACCCGGTCATTGTTGACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGc                                                                                                                                                                                                                                                <  1:17355/162‑1 (MQ=255)                                                                                                                                                  acgcatccNTTTAATCGCGGGCGCTTATTTCGCCGCGTGAACGGATATCATCTGCTTAACCCGGTTATTGTTTACTGACCTTCCCGCCAGGCAGTGGCGGAGCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCATCAGTTGCGTTATGCGGCGGAAAAATCGCGGCGTAAATTCCTCTATGACACCAACGTTGGGGCTGGATTACCGGTTATTGAGAACCTGc                                                                                                                            <  2:269337/268‑1 (MQ=255)                                                                                                                                                         gcctggctggaagtgcagtcaacaatgaccgggttcagcagatgatattctttcacgaggcgaattaagcgcccgagattaaacggctctttggcttgcgccagttcttcctgcGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCATCAGTAGCGTTATGCGGCGGAAAAATCGCGGCGTAAATTCCTCTATGACACCAACGTTGGGGCTGGATTAc                                                                                                                                              >  2:574092‑M2/115‑249 (MQ=255)                                                                                                                                                             ggctggaagtgcagtcaacaatgaccgggttcagcagatgatattctttcacgaggcgaattaagcgcccgagattaaacggctctttggcttgcgccagttcttcctgcGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCATCAGTAGCGTTATGCGGCGGAAAAATCGCGGCGTAAATTCCTCTATGACACCAACGTTGGGGCTGGATTACCGGt                                                                                                                                          <  1:574101‑M2/139‑1 (MQ=255)                                                                                                                                                                   cGGGCGCTTAATTCGCCTCGTTAAAGAAGATCAGCTGCTTAACCCGGTCATTGTTGCCTGTACTTCCAGTCAGGCAGTGGGGAAGCAATAGGACGACTTCCTGCGTGAATGTTTCTGCGGTGTCACGCCGAAAAAAAAGGCCAACACCTCGTCGATAGATTACTACCATCAGTTGCGTTATTGTGCAGAAAAATCGCGGCGTAAAGTCCTCTATGACACCAACGTTGGGGCTGGATTACCGGTTATGGAGATCCTGCAAAATCTGCTCAATGc                                                                                                            <  2:630197/273‑1 (MQ=255)                                                                                                                                                                     ggCGCTTAATTCGCCTCGTGAAAGAATATCATCTGCTGCACCCGGTCATTATTGACTGCACTTCCAGCCCGGCAGTGGCGGATCAATATGCCGACTTCCTCCGCGAAGGTTTCCACGTTGTCACGCCGCACAAAAAACCCAACACCTCTTCGCTGGATTACTACCATCCGTTCCGTTATGCGGCGGACAACTCGCTGAGTAAATTCCTCTATGCAACCAACGCTGTGACTGGATTCCCGGTTATGTAGACCCTCCAAAAACTACTCCATCCAGGt                                                                                                        >  2:194226/1‑275 (MQ=255)                                                                                                                                                                     ggCGCTTAATTCGCCTCGTGAAAGAATATCATCTGCTGAACCCGGTCATTGTTGACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCATCAGTTGCGTTATGCGGCGGCAAAATCGCGGCGTAAATTCCTCTATGACACCAACGTTCGGGCTGGATTACCGGTTCTTGAGAACCTGCAAAATCTGCTCAATGCaag                                                                                                         >  1:630206/1‑272 (MQ=255)                                                                                                                                                                           tAATTCGCCTCGTGAAAGAATATCATCTGCTGAACCCGGTCATTGTTGACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGNACAAAAAGGCCAACACCTCGTCGATGGATTACTACCATCAGTTGCGTTATGCGGCGGAAAAATCGCGGCGTAAATTCCTCTATGACACCAACGTTGGGGCTGGATTACCGGTTATTGAGAACCTGCAAAATCTGCTCAATGCAGGTGATGaa                                                                                                  <  1:597399/275‑1 (MQ=255)                                                                                                                                                                                aatgaccgggttcagcagatgatattctttcacgaggcgaattaagcgcccgagattaaacggctctttggcttgcgccagttcttcctgcGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGa                                                                                                                                                                                                                                  >  1:303176‑M2/92‑142 (MQ=255)                                                                                                                                                                                aatgaccgggttcagcagatgatattctttcacgaggcgaattaagcgcccgagattaaacggctctttggcttgcgccagttcttcctgcGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATgg                                                                                                                                                                                                                               >  1:386134‑M2/92‑145 (MQ=255)                                                                                                                                                                                aatgaccgggttcagcagatgatattctttcacgaggcgaattaagcgcccgagattaaacggctctttggcttgcgccagttcttcctgcGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCATCAGTTGCGTTATGCGGCGGAAAAATCGCGGCGTaa                                                                                                                                                                                 >  2:155184‑M2/92‑191 (MQ=255)                                                                                                                                                                                    accgggttcagcagatgatattctttcacgaggcgaattaagcgcccgagattaaacggctctttggcttgcgccagttcttcctgcGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGa                                                                                                                                                                                                                              <  2:303170‑M2/55‑1 (MQ=255)                                                                                                                                                                                    accgggttcagcagatgatattctttcacgaggcgaattaagcgcccgagattaaacggctctttggcttgcgccagttcttcctgcGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATta                                                                                                                                                                                                                           <  2:386128‑M2/58‑1 (MQ=255)                                                                                                                                                                                    accgggttcagcagatgatattctttcacgaggcgaattaagcgcccgagattaaacggctctttggcttgcgccagttcttcctgcGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCATCAGTTGCGTTATGCGGCGGAAAAATCGCGGCGTAAATTc                                                                                                                                                                             <  1:155187‑M2/104‑1 (MQ=255)                                                                                                                                                                                      gTGAAAGAATATCATCTGCTGAACCCGGTCATTGCTGACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCATCTGTTGCGTTATGCGGCGGACAAATCGCGGCGTNAATTCATCNATGACACCAACGTTGGGGCTGGATTAACGGTTATTTAGAACCTGCAAAATCTGCTCAATGCAGGTATTGAATTGATGAAGt                                                                                        >  1:470765/1‑274 (MQ=255)                                                                                                                                                                                                    tcTGCTGAACCCGGTCATTGTTGACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGcgcg                                                                                                                                                                                                                                                                                  <  1:200873/74‑1 (MQ=255)                                                                                                                                                                                                      tgctgAACCCGGTCATTGTTGACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCATCAGTTGCGTTATGCGGCGGAAAAATCGCGGCGTAAATTCCTCTATGACCCCAACGTTGGGGCTGGATTACCGGTTATTGAGAACCTGCAAAATCTTCTCAATGCAGGTGATGAATTGATGAAGATTTCCGGCAttctttct                                                                       >  1:432684/1‑275 (MQ=255)                                                                                                                                                                                                       gctgAACCCGGTCATTGTTGACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATgg                                                                                                                                                                                                                               >  2:598707/1‑122 (MQ=255)                                                                                                                                                                                                        ctgAACCCGGTCATTGTTGACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGcgcg                                                                                                                                                                                                                                                                                  <  2:209446/70‑1 (MQ=255)                                                                                                                                                                                                           aaCCCGGTCATTGTTGACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGaa                                                                                                                                                                                                                                                         >  2:246929/1‑92 (MQ=255)                                                                                                                                                                                                           aaCCCGGTCATTGTTGACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATta                                                                                                                                                                                                                           <  1:598716/122‑1 (MQ=255)                                                                                                                                                                                                               cGGTCATTGTTGACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACaaa                                                                                                                                                                                                                                                     <  1:246934/92‑1 (MQ=255)                                                                                                                                                                                                                ggTCATTGTTGACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCa                                                                                                                                                                                                                                              >  1:693791/1‑98 (MQ=255)                                                                                                                                                                                                                ggTCATTGTTCACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCATCAGTTCCGTTATGCGGCGGAAAAATCGCGGCGTAAATTCCTCTATGACACCAACGTTGGGGCTGGATTACCGGTTTTTGAGAACCTGCAAAATCTGCTCAATGCAGGTGATGAATTGATGAATTTCTCCGGCATTCTTTCATGTTCGCtc                                                              >  1:722794/1‑273 (MQ=255)                                                                                                                                                                                                                  tgaTTGTTGACTGCACTCTGAGCCAGCCAGTGGCGGATCAATATGCCGCTTTCCTGCGCGAAGGTTTCCACGTTGTCGCGCCGAACGAAAAGGCCAACACCTCTTCGATGGATTACTACAATCAGTTGCGTTATGCGCAGGAAAAATCGCGTCGTAAATTCCTCTATGACACCAACGTTGTGGCTGGATTCCCGGTTATGGAGAACCTGCAAAATCTGATCAATGCAGGTGATGAAGTGCTGAAGTTCTCTGCCATTCTTTCTGTTCCGCtttat                                                           >  2:648971/3‑273 (MQ=255)                                                                                                                                                                                                                    aTTGTTGACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAacac                                                                                                                                                                                                                                          <  2:693782/98‑1 (MQ=255)                                                                                                                                                                                                                               cACTACCAGCAAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTTTCACGCCGAACAAAAAGGCCACCACCTCGTCGATGGATTACTACCATCAGTTGCGTTATGCGGCGGACAAATCGCGGCCTAAATTCCTCTATGACCCCAACGTTGGGGCTGGCTTACCGGTTATTGCGAACCTCCAAAACCTGCTCACTGCATGTGATGAATTGATGAAGTTTTACGGCATTCTTTCAGGTTCTTTTTCTTATATCTTCGGc                                               >  1:721506/1‑274 (MQ=255)                                                                                                                                                                                                                                  tgcgcgcgtggCAGTGGCGGATCATAATGCCGCCTGCCTCCGCGAACTTTTCACCGTTGTCACGCCGAACAAAAAGGCTAACACATCGTCGATGGATTACTACCATAAGTTGCGTTATGCGGCGGAAAAAGCGCGGCGTAAATTCCTCTATGACACCAACGTTGGGGCTGGATTACCGGTTATTGAGAACCTGCAAAATCTGCTCAATGCAGGTGATGAATTGATGAAGTTCTCCGGCATTCTTTCTGGTTCGCTTTCTTATATCTTCGGCAAGt                                           <  2:99834/266‑1 (MQ=255)                                                                                                                                                                                                                                    ccagccagGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCATCAGTTGCGTTATGCGGCGGAAAAATCGCGGCGTAAATTcc                                                                                                                                                                            >  1:627187/1‑144 (MQ=255)                                                                                                                                                                                                                                       gccagGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACaaaaa                                                                                                                                                                                                                                                   >  2:461545/1‑70 (MQ=255)                                                                                                                                                                                                                                        ccagGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCATCAGTTGCGTTATGCGGCGGAAAAATCGCGGCGTAAATTCCTCTa                                                                                                                                                                        <  2:627178/144‑1 (MQ=255)                                                                                                                                                                                                                                         cagGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCATCAGt                                                                                                                                                                                                                >  2:171157/1‑103 (MQ=255)                                                                                                                                                                                                                                           ggCAGTGGCGGATCAATATGCCGACTTCCTGCGCGTAGGTTTCAACGTTGTCACGCCGAACAAAAAGGcc                                                                                                                                                                                                                                               <  1:461552/70‑1 (MQ=255)                                                                                                                                                                                                                                           ggCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCATCAGTTGCGTTATGCGGCGGAAAAATCGCGGCGTAAATTCCTCTATGACACCAACGTTGGGGCTGGATTACCGGTTATTGAGAACCTGCAAAATCTGCTGAATGCAGGTGATGAATTGATGAAGTTCTCCGGCATTCTTTCTGGTTCGCTTTCTTATATCTTCGGCAAGTTAGACGAAg                                  >  1:721268/1‑275 (MQ=255)                                                                                                                                                                                                                                             cAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCATCAGTTGCg                                                                                                                                                                                                            <  1:171160/103‑1 (MQ=255)                                                                                                                                                                                                                                                  gCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCATCAGTTGCGTTATGCGGCGGaaaa                                                                                                                                                                                             >  1:388193/1‑113 (MQ=255)                                                                                                                                                                                                                                                      aTCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACTCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCATCAGTTGCGTTATGCGGCGGAAAAATcg                                                                                                                                                                                         <  2:388187/113‑1 (MQ=255)                                                                                                                                                                                                                                                      aTCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCATCAGTTGCGTTATGCGGCGGAAAAATCGCGGCGt                                                                                                                                                                                   >  2:7085/1‑119 (MQ=255)                                                                                                                                                                                                                                                          atatGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCATCAGTTGCGTTATGCGGCGGAAAAATCGCGGCGTAAAt                                                                                                                                                                               <  1:7085/119‑1 (MQ=255)                                                                                                                                                                                                                                                              gCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATtac                                                                                                                                                                                                                          >  1:626801/1‑72 (MQ=255)                                                                                                                                                                                                                                                                cGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACaaaaa                                                                                                                                                                                                                                                   >  2:326249/1‑45 (MQ=255)                                                                                                                                                                                                                                                                cGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCATCAGTTGCGTTATGCGGCGGAAAAATCGCGGCGTAAATTCCTCTATGACACCAACGTTGGGGCTGGATTACCGGTTATTg                                                                                                                                     >  2:45859/1‑155 (MQ=255)                                                                                                                                                                                                                                                                  aCTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTAcc                                                                                                                                                                                                                      <  2:626792/72‑1 (MQ=255)                                                                                                                                                                                                                                                                  aCTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCATCAGTTGCGTTATGCGGCGGAAAAATCGCGGCGTAAATTCCTCTATGACACCAACGTTGGGGCTGGa                                                                                                                                                  >  1:350886/1‑140 (MQ=255)                                                                                                                                                                                                                                                                    ttcctgcGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGcc                                                                                                                                                                                                                                               <  1:326255‑M2/38‑1 (MQ=255)                                                                                                                                                                                                                                                                    ttcctgcGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCATCAGTTGCGTTATGCGGCGGAAAAATCGCGGCGTAAATTCCTCTATGACACCAACGTTGGGGCTGGATTACCGGTTATTGAGaa                                                                                                                                 <  1:45859‑M2/148‑1 (MQ=255)                                                                                                                                                                                                                                                                      cctgcGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCATCAGTTGCGTTATGCGGCGGAAAAATCGCGGCGTAAATTCCTCTATGACACCAACGTTGGGGCTGGATTAc                                                                                                                                              <  2:350880‑M2/135‑1 (MQ=255)                                                                                                                                                                                                                                                                         gcGCGAAGTTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCATCAGTAGCGTTATGCGGCGTAACAATCGCGGCGTAAATTCct                                                                                                                                                                           >  2:250654‑M2/3‑108 (MQ=255)                                                                                                                                                                                                                                                                         gcGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCATCAGTTGCGTTATGCGGCGGAAAAATCGCGGCGTAAATTCCTCTATGACACCAACGtt                                                                                                                                                           >  1:17371‑M2/3‑124 (MQ=255)                                                                                                                                                                                                                                                                           gcgAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCATCAGTTGCGTTATGCGGCGGAAAAATCGCGGCGTAAATTCCTCTATGACACCAACGTTGGGGCTGGATTACCGGTTATTGAGAACCTGCAAAATCTGCTCAATGCAGGTGATGAATTGATGAAGTTCTCCGGCATTCTTTCTGGTTCGCTTTCTTATATCTTCGGCAAGTTAGACGAAGGCATGAGTTTCTCCGAGGCGACCACGCTGgcg  <  1:13461/275‑1 (MQ=255)                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                                   CTGGAGCAACTGAAGCGTCAGCAAAGCTGGCTGAAGAATAAACAT‑ATCGACTTACGTGTCTGCGGTGTTGCCAACTCGAAGGCTCTGCTCACCAATGTACATGGCCTTAATCTGGAAAACTGGCAGGAAGAACTGGCGCAAGCCAAAGAGCCGTTTAATCTCGGGCGCTTAATTCGCCTCGTGAAAGAATATCATCTGCTGAACCCGGTCATTGTTGACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCATCAGTTGCGTTATGCGGCGGAAAAATCGCGGCGTAAATTCCTCTATGACACCAACGTTGGGGCTGGATTACCGGTTATTGAGAACCTGCAAAATCTGCTCAATGCAGGTGATGAATTGATGAAGTTCTCCGGCATTCTTTCTGGTTCGCTTTCTTATATCTTCGGCAAGTTAGACGAAGGCATGAGTTTCTCCGAGGCGACCACGCTGGCG  >  CP009273/1777‑2316

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.