New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	71874 =	57 (1.480)	6 (0.170)	6/296	NT	10.1%	coding (94/984 nt)	thiB	thiamine‑, thiamine pyrophosphate‑, thiamine monophosphate‑binding ABC transporter periplasmic protein; ThiBPQ thiamine, thiamine pyrophosphate importer
	?	CP009273	72027 =	53 (1.460)					intergenic (‑60/+104)	thiB/sgrR	thiamine‑, thiamine pyrophosphate‑, thiamine monophosphate‑binding ABC transporter periplasmic protein; ThiBPQ thiamine, thiamine pyrophosphate importer/transcriptional DNA‑binding transcriptional activator of sgrS sRNA

GCGCCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATGCGCAGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAGTGGTGCAATAATGGCACCATCGCTTTGCTGGCGACCAGTTGCTGGCACCAGTTCGCCAGATTCATCT  >  CP009273/71799‑72300                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                                                  gcgcCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTANGTATAAACAGTCAGAACGAGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTCTCTCAGCGCacgcgta                                                                                                                                                                                                                                     <  1:537200/275‑1 (MQ=255)                      caTTTCAGTCTCCTTCCAAGGCTTTTTTAACCACCGTACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACTGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGaa                                                                                                                                                                                                                <  1:189398/274‑1 (MQ=255)                            gtacgggtanaaaGGCTTTTTTAACCACCGGACCACGCACCCAGTGGGGGGCGAAGGAATCGTAGGTATAAACAGTAAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGt                                                                                                                                                                                                          <  2:258123/265‑1 (MQ=255)                            aGTCGGCTTCAAAGGCTTTTTTAACCACCGGGCCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGt                                                                                                                                                                                                          <  1:159120/275‑1 (MQ=255)                                        aGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATGAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGATTGTCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGCTCAGGTTCGACGGGTATTTTCTCAGCGCac                                                                                                                                                                                                                                          >  1:174177/1‑231 (MQ=255)                                            ttttttAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTg                                                                                                                                                                                          >  1:87781/1‑275 (MQ=255)                                                         cgcagaGGCCCCCCGTCGGCGGCGCAGGAATCGTAGGTATAAACAGTCAGGTCTGGTTTATCGACAACGGGCGCTGTGCACAGCAACAGCAGCGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAACCTCAAATCCCTTCGCCGTCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAg                                                                                                                                                                               <  2:91011/268‑1 (MQ=255)                                                               ggCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGt                                                                                                                                                                                                                                                                                >  2:489257/1‑170 (MQ=255)                                                                gCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAAGGGAGTTAGTGTAGTGATTTTGTTCTCAACNAGCacttctgc                                                                                                                                                                      >  2:57988/1‑268 (MQ=255)                                                                   cccAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATc                                                                                                                                                                                                                                                                            <  1:489264/170‑1 (MQ=255)                                                                     cAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAATAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGAATTTGTTATCAACCAGAAATCATGGATCCg                                                                                                                                                                 >  1:173084/1‑275 (MQ=255)                                                                           ggtGCGAANGAATCGTAGGTATAAACAGGCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGgc                                                                                                                                                            >  2:270078‑M1/4‑274 (MQ=255)                                                                             GGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGgcgc                                                                                                                                                          <  1:270083‑M1/274‑1 (MQ=255)                                                                                      aacGTAGGGATAAACCGTCAGAACGGGTTTGGCGAAACCGGGGGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGc                                                                                                                                                 <  2:660021/272‑1 (MQ=255)                                                                                            ggTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATGTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGACCGGCGTGAGTGTAGTGATTTTGTTATCAAACCGCAATCATGGATCAGGTGGCTCAACGCACGGTGAttg                                                                                                                                           >  2:714471/1‑273 (MQ=255)                                                                                               tccttctcaagtcctttgccactcttttttgaggtgcaaagtgttaaaaaaatgtctgcccctgctgttgctgtgcacagcgcccgttttcgctaaacccgttctgactgtttatacctacgattccttcgccgGCGTTATCCGGATCAGTTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTTTCAACCAGCAATCATGGATCCGTTGGCTCACACGCCGCTGAtgtacac                                                                                                                                       >  2:494346‑M2/135‑272 (MQ=255)                                                                                               ataAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGAGCAAACCACGCTGATTTaaaa                                                                                                                                       >  1:135223/1‑275 (MQ=255)                                                                                               ataAACAGTCAGAACGGGTCTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAATGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGACGtt                                                                                                                                                                                                         >  1:573467/1‑209 (MQ=255)                                                                                                taAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCCGGTTCGACGGNTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAAcc                                                                                                                                                     >  1:660030/1‑260 (MQ=255)                                                                                                    cAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGCACCGGTGGAGCCAACCACGCTGATTCAAAATCGaa                                                                                                                                  >  2:684019/1‑275 (MQ=255)                                                                                                          gAACGGGTTCAGCGAAAACGGGCGTTGTGCACAGCAACAGCAGGGGCAGAAATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGGGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGcc                                                                                                                            <  1:418882/275‑1 (MQ=255)                                                                                                            aCGGGTTTAGCGGAAACGGACGCTTTTCACAAAAACAGCAGGGGCATACATTTTTTTAACACTTTGAACCTCAAAAAATAGTGGCAAAGGACTTGGGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGcc                                                                                                                            <  2:173081/273‑1 (MQ=255)                                                                                                              cggattAGCGAANGCGGGCCCTGTACACAGCACCAGCAGGGGCTGACATTTTTTTAACACTTTGCCCCTTAAAAAAGAGTGGCAAGTGACTTGGGAAGGAGCCTCAAATCCCTTCGCCCGCGTTATCCGGATCAGGTTCGACCGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGa                                                                                                                          <  2:531502/269‑1 (MQ=255)                                                                                                                   actcttttttgaggtgcaaagtgttaaaaaaatgtctgcccctgctgttgctgtgcacagcgcccgttttcgctaaacccgttctgactgtttatacctacgattccttcgccgGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGAt                                                                                                                                                                    >  2:266920‑M2/115‑226 (MQ=255)                                                                                                                     gCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTgg                                                                                                                                                                                                                              >  2:198916/1‑166 (MQ=255)                                                                                                                       ttttttgaggtgcaaagtgttaaaaaaatgtctgcccctgctgttgctgtgcacagcgcccgttttcgctaaacccgttctgactgtttatacctacgattccttcgccgGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCgg                                                                                                                                                                <  1:266925‑M2/116‑1 (MQ=255)                                                                                                                         aaaCGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCAcc                                                                                                                                                                                                                          <  1:198919/166‑1 (MQ=255)                                                                                                                          aaCGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACCTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATgcg                                                                                                             <  1:684028/274‑1 (MQ=255)                                                                                                                                cgcttggCACAGCAACAGCAGTGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGTAAAGGACTTTAGAAGGAGCCTCAAATNCCTTCGCCGGCGTTATCCGCATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACTCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGTTATTCATGCGCAGGCcg                                                                                                      <  1:552588/269‑1 (MQ=255)                                                                                                                                agctggaccanacaacagacGGGGCCGACCTTTGTTTACCACTTTCCCCACCAGAAAAGAGTGGCAAAGGTCTTGAACAGGAGCCTCACATCCCTTCGCCGGCCGTATTCGGATCAGGTTCGACGGGTATTTTATCAGCTCACGCGTACGCGTGGCACCTCGTTGATAACGGCGTTAGTGTAGTGATGTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAATCCACGCTGATTTAAAAACGAACCAGCCGAGGGTATTCATGCGCAGGcc                                                                                                       <  2:52643/262‑1 (MQ=255)                                                                                                                                              gcggaagGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATGCGCAGGCCGCGCATACTGCGtt                                                                                         <  2:87780/269‑1 (MQ=255)                                                                                                                                               cagcagGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGACCTGCGTTAGTGTAGTGATTTTGTTATCAACCAGCACTCATGGATCCGGCGGCGCAAACATCGCTGATTTAAAATCGAACCAGCCGTGGGTATGCATTCGCAGGCCGCGCATACTGCgggg                                                                                        >  2:194522/1‑271 (MQ=255)                                                                                                                                                  atgtctgcccctgctgttgctgtgcacagcgcccgttttcgctaaacccgttctgactgtttatacctacgattccttcgccgGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTg                                                                                                                                               >  1:557514‑M2/84‑216 (MQ=255)                                                                                                                                                    ggggCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATc                                                                                                                                                                                     >  2:209477/1‑176 (MQ=255)                                                                                                                                                    ggggCAGACATTTTTTTAACACTTTGCACCTAAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAAGCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATGCGCAGGCCGCGCATACTGCGTTGCCCCt                                                                                   <  1:343885/274‑1 (MQ=255)                                                                                                                                                      ggCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTAt                                                                                                                                                                                      >  2:221498/1‑173 (MQ=255)                                                                                                                                                      ggCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAAcc                                                                                                                                                     >  2:245818/1‑206 (MQ=255)                                                                                                                                                      ctgcccctgctgttgctgtgcacagcgcccgttttcgctaaacccgttctgactgtttatacctacgattccttcgccgGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGAttt                                                                                                                                           <  2:557505‑M2/137‑1 (MQ=255)                                                                                                                                                        cAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAAcc                                                                                                                                                                                 <  1:209481/176‑1 (MQ=255)                                                                                                                                                          gACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAAc                                                                                                                                                                                  <  1:221503/173‑1 (MQ=255)                                                                                                                                                          gACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGc                                                                                                                                                 <  1:245823/206‑1 (MQ=255)                                                                                                                                                           aCATTTTTTTAACACTTTTCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACTGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATGCGCAGGCCGCGCATACTGCGTTGCCCCTGAATGa                                                                             <  1:194525/273‑1 (MQ=255)                                                                                                                                                             aTTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGAttt                                                                                                                                                                                            >  2:191870/1‑160 (MQ=255)                                                                                                                                                                 ttttAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGtt                                                                                                                                                                                        <  1:191873/160‑1 (MQ=255)                                                                                                                                                                    tAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAACCCCTTCGCCGGCGTTATCCGGATCNGGTTCGACNGGTATTTTCTCATCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATGCGCAGGCAGCGCATATTGCGTTGCCCCTGAATGATCAGCCAg                                                                     <  1:465026/272‑1 (MQ=255)                                                                                                                                                                      acacTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATGCGCAGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAgtggt                                                                 <  1:375168/274‑1 (MQ=255)                                                                                                                                                                         cTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGa                                                                                                                                                                     >  1:44500/1‑171 (MQ=255)                                                                                                                                                                         cTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATc                                                                                                                                     >  1:70973/1‑203 (MQ=255)                                                                                                                                                                             gCACTTCAAAAAAGATTGGAAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGTTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACGCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATGCGCAGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAgcaaagcgatggt                                                         <  1:256181/275‑13 (MQ=255)                                                                                                                                                                             gCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCg                                                                                                                                                                 <  2:44500/171‑1 (MQ=255)                                                                                                                                                                             gCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAAc                                                                                                                                 <  2:70972/203‑1 (MQ=255)                                                                                                                                                                                  ccgttttcgctaaacccgttctgactgtttatacctacgattccttcgccgGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCNCGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATGCGCAGGCCGCGCATACTGCGTTGCCCCTGTATGATCAGCCAGTGGTGCAATAATGGCAc                                                    <  1:494353‑M2/224‑1 (MQ=255)                                                                                                                                                                                    aaaaaaGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTg                                                                                                                                                                                                                    >  1:433838/1‑113 (MQ=255)                                                                                                                                                                                        aaGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGaa                                                                                                                                                                                                                <  2:433831/113‑1 (MQ=255)                                                                                                                                                                                             tGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTg                                                                                                                                                                                                                    >  1:23127/1‑104 (MQ=255)                                                                                                                                                                                                 aaaGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGaa                                                                                                                                                                                                                <  2:23127/104‑1 (MQ=255)                                                                                                                                                                                                       cTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGGATTTTCTCAGCGCACGCGTACGCGTGGAACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATGCGCAGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAGTGGTGCAATAATGGCACCATCGCTTTGCTGGCGACCAg                               <  1:78827/275‑1 (MQ=255)                                                                                                                                                                                                               ggAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTACAATCGAACCAGCCGAGGGTATTCATGCGCAGGCCGCGCATACTTCGTTGCCCCTAAGAGATCCGCCAGTGGTGCCACATTGGCACCATCCCCTTGCTTGCACCCATTTGNTggn                       >  2:1796/1‑274 (MQ=255)                                                                                                                                                                                                               ggAGCCTCAAATCACTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTGAGTGTAGTGATTTTGTTATCAACCAGCAATCGTGGATCCGGTGGCGCAAACCACGCTGATGTAAAATCGAACCAGCCGCGGGTATTCATGCGCAGGCAGCGCATACTGCGTTGCCCCTGAATGATAAGCCAGTGGTGCAATAATGCCACCATCGCTTTGCTAGCGACCAGTTGCTgac                       >  1:247088/1‑273 (MQ=255)                                                                                                                                                                                                                gAGCCTCAAATCCCTTCGCCGGCGTTATACGGATCAGGTTCGACTGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCNTGCGCAGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAGTGGTGCAATAATGGCACCATCGCTTTGCTGGCGACCAGTTGCTGGCa                      >  1:529170/1‑275 (MQ=255)                                                                                                                                                                                                                  gCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATgcgc                                                                                                            >  2:598923/1‑187 (MQ=255)                                                                                                                                                                                                                      cAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATGCGCAGGc                                                                                                        <  1:598932/187‑1 (MQ=255)                                                                                                                                                                                                                               tcgccgGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGt                                                                                                                                                               >  1:307006‑M2/7‑123 (MQ=255)                                                                                                                                                                                                                                   cgGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGgcg                                                                                                                                                           <  2:307000‑M2/121‑1 (MQ=255)                                                                                                                                                                                                                                     gCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATGCGCAGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAGTGGTGCAATAATGGCACCATCGCTTTTCTGGCGACCAGTTGACGGCACCAGTTCGCCAGATTCAtcc  >  1:410053/1‑273 (MQ=255)                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                                                  GCGCCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATGCGCAGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAGTGGTGCAATAATGGCACCATCGCTTTGCTGGCGACCAGTTGCTGGCACCAGTTCGCCAGATTCATCT  >  CP009273/71799‑72300

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.