Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ CP009273 2988529 2988633 105 2 [1] [1] 2 ygeK/ygeN pseudogene; putative 2‑component transcriptional regulator/pseudogene

TTCATTTATAATCATCCCTTCCATTATTATTATAAGCAAAATCCAAAGA  >  CP009273/2988484‑2988532
                                            |    
ttcattTATAATCATCCCTTCCATTATTATTATAAGCAAAATCCa      >  2:388414/1‑45 (MQ=255)
    tttATAATCATCCCTTCCATTATTATTATAAGCAAAATCCAAAGa  <  1:388422/45‑1 (MQ=255)
                                            |    
TTCATTTATAATCATCCCTTCCATTATTATTATAAGCAAAATCCAAAGA  >  CP009273/2988484‑2988532

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: