Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP009273	2004753	2004803	51	2 [1]	[1] 2	yedN	pseudogene, IpaH/YopM family

TCGCTGCGATCTTTCATAGCAAATCCCTGTCAAAGTCCATGATATAAAAATGTCTCTTCAAAAGAATTACATTCTTTAAAAAGTAATTCTTTA  >  CP009273/2004800‑2004892     |                                                                                         tCGCTGCGATCTTTCATAGCAAATCCCTGTCAAAGTCCATGATATAAAAATGTCTCTTCAAAAGAATTACATTCTTTAAAAAGTAATTc      >  1:450885/1‑89 (MQ=255)     tGCGATCTTTCATAGCAAATCCCTGTCAAAGTCCATGATATAAAAATGTCTCTTCAAAAGAATTACATTCTTTAAAAAGTAATTCTTTa  <  2:450876/89‑1 (MQ=255)     |                                                                                         TCGCTGCGATCTTTCATAGCAAATCCCTGTCAAAGTCCATGATATAAAAATGTCTCTTCAAAAGAATTACATTCTTTAAAAAGTAATTCTTTA  >  CP009273/2004800‑2004892

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑