| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | CP009273 | 1,613,357 | Δ20 bp | 94.9% | intergenic (‑192/‑1) | marC ← / → marR | UPF0056 family inner membrane protein/transcriptional repressor of multiple antibiotic resistance |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 1613356 | 3 (0.070) | 54 (1.300) | 39/284 | NT | 94.9% | intergenic (‑191/‑21) | marC/marR | UPF0056 family inner membrane protein/transcriptional repressor of multiple antibiotic resistance |
| ? | CP009273 | 1613377 = | 3 (0.070) | coding (1/435 nt) | marR | transcriptional repressor of multiple antibiotic resistance | |||||
GCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAGTATAAGGGGTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATG > CP009273/1613117‑1613650 | tggtaattggtttacttacggcagcaacaccaccagccccaggccaattgatttaaacaaatcgaactatggtggttgttatcctgtgtatctgggttatcagcgaaaagtataaggggtaaacaaggataaagtgtcactctttagctagccttgcatcgcattgaacaaaacttgaaccgattaagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggaaatattatcccctgcaactaatGTGAAAAGTACCa < 2:787023‑M2/13‑1 (MQ=255) agctaacggcagcaacaccaccagccccaggccaattgctttaaacaaatctaacattggtggttgttatcctgtgtatctgggttatcagcgaaaagtataaggggtaaacaaggataaagtgtcactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatctgtcaattcattcatttgacttatacttgcctgggcaatattatcccctgcaactaatGTGAAAATTACCAGCGATCTGTtcact > 1:237722‑M2/249‑273 (MQ=255) ccccaggccaattgctttaaacaaatctaacattggtggttgttatcctgtgtatctgggttatcagcgaaaagtataaggggtaaacaaggataaagtgtcactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCtt < 1:338081‑M2/50‑1 (MQ=255) aggccaattgctttaaacaaatctaacattggtggttgttatcctgtgtatctgggttatcagcgaaaagtataaggggtaaacaaggataaagtgtcactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGt > 2:580616‑M2/221‑242 (MQ=255) caattgctttaaacaaatctaacattggtggttgttatcctgtgtatctgggttatcagcgaaaagtataaggggtaaacaaggataaagtgtcactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCaa < 1:580621‑M2/26‑1 (MQ=255) tttaaacaaatctaacattggtggttgttatcctgtgtatctgggttatcagcgaaaagtataaggggtaaacaaggataaagtgtcactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaatattatcccctgcaactaatgtg < 1:229529‑M2/3‑1 (MQ=255) gtgatctaacattgggggttgttatcctgttgatatgggttataagcgaaaagtataaggggtaaaaaaggataaagtgtcactctttagctagccttgaatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgtgcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCagaa < 2:237718‑M2/71‑1 (MQ=255) tgtATCTGGGTTATCAGCGAAAAGTATAAGGGGTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AC‑‑‑TGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCCTTGGGTCGCTTAATCCATATGTTTAATCAGAAGAAAGAACGCCTGCTTAANTAGTaaccat > 2:62391/1‑269 (MQ=255) ggtggttgttatcctgtgtatctgggttatcagcgaaaagtataaggggtaaacaaggataaagtgtcactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGt > 1:507287‑M2/191‑212 (MQ=255) gttgttatcctgtgtatctgggttatcagcgaaaagtataaggggtaaacaaggataaagtgtcactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCaa < 2:507282‑M2/26‑1 (MQ=255) gtgtatctgggttatcagcgaaaagtataaggggtaaacaaggataaagtgtcactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTaa > 1:392422‑M2/176‑264 (MQ=255) tgtatctgggttatcagcgaaaagtataaggggtaaacaaggataaagtgtcactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGt > 2:342560‑M2/175‑274 (MQ=255) ctgggttatcagcgaaaagtataaggggtaaacaaggataaagtgtcactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttacctgtgcaatcttatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGACTCTGTCTCCGc > 1:162842‑M2/170‑275 (MQ=255) aaaCAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTCAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTTATTTGACTTATACTTGCTTGGGCAATATTATCCCCTGCAACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AC‑‑‑TGTGAAACGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAAACAGAAGAAAGATAGCTTGCTTAACGAGTATCTGTCTCGGCTGGATATTCCAGCGGCACAGTTTAAGGtt > 2:765171/1‑274 (MQ=255) gcgaaaagtataaggggtaaacanggataaagtgtcactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCt < 1:643932‑M2/49‑1 (MQ=255) gaaaagtataaggggtaaacaaggataaagtgtcactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaatattatcccctgcaactcatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGNAAGATCGCCTGCTTAACgacaatctgtctcccccatatatatc > 2:520354‑M2/157‑260 (MQ=255) aaaagtataaggggtaaacaaggataaagtgtcactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTaa > 1:500352‑M2/156‑207 (MQ=255) aagtataaggggtaaacaaggataaagtgtcactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGc < 1:342564‑M2/122‑1 (MQ=255) agtcttatgtggtaacaagactaaagtgtcacgctttagctagccttgcatcgcattgaatcaaacttgaaccgatttaggaaaacgtggcatcggtcaattcattcagttgacttatacttgcctgtgcaatattatcccctgcaactaatGTGAAAAGCACCAGCGATCTGTTCAATGAAAGTATTCCATTGGGTCGCTTAATCCATATCGGTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATCTTCCCGCGGc < 2:162842‑M2/122‑1 (MQ=255) gtataaggggtaaacaaggataaagtgtcactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCa < 2:500347‑M2/56‑1 (MQ=255) gtaaacaaggataaagtgtcactggttacgtagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTNGGt > 1:575831‑M2/143‑187 (MQ=255) ctccTTAACCAGCCTTGCGTAGCATTGAACCAAACCTGAACCGATTTATATAAACGTTGCATCGGTCAATTTATTCATTTGCATTATTGCTGCCTGGGCAATATTATCCCCTGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAA‑‑AA‑GTGACAATTAACAGCAATCTGTTCAATAGAATTATTCCACTGGGTCGCTTAAACCTTATGGTTAATCAGAAGATAGATCGGCTGGTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGTCAGAGTTTAAGGTGCTATGCTCTATCCGCTgcg < 2:276790/275‑1 (MQ=255) acaaggataaagtgtcactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCt < 2:575826‑M2/49‑1 (MQ=255) aaggataaagtgtcactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtagcatcggtcaattcattcatttgacttatacttgcctgggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAg < 1:765180‑M2/132‑1 (MQ=255) ggataaagtgtcactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGtttctctga > 1:276794‑M2/135‑274 (MQ=255) gataaagtgtcactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGt > 2:807247‑M2/134‑155 (MQ=255) gataaagtgtcactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGa > 2:272338‑M2/134‑225 (MQ=255) aagtgtcactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCaa < 1:807256‑M2/26‑1 (MQ=255) aagtgtcactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTAt < 1:272342‑M2/96‑1 (MQ=255) cactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCAt > 1:344475‑M2/124‑163 (MQ=255) ctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTggg < 2:344471‑M2/44‑1 (MQ=255) ttagctagccttgaatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCgcggc < 1:105382‑M2/158‑1 (MQ=255) gccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGtc > 1:64982‑M2/111‑211 (MQ=255) gccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGAgtgt > 1:91930‑M2/111‑272 (MQ=255) cattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCcgttttt > 2:697246‑M2/100‑273 (MQ=255) cattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCAAAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATNTCTCCGCTTGa > 2:74184‑M2/100‑275 (MQ=255) aacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGACATTATTCCATTGGGTc > 1:49495‑M2/90‑135 (MQ=255) aacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGt > 1:348504‑M2/90‑134 (MQ=255) tgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCtt < 2:49495‑M2/50‑1 (MQ=255) tgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCt < 2:348500‑M2/49‑1 (MQ=255) gaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAgg > 2:131851‑M2/85‑217 (MQ=255) cgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGtgct < 1:131851‑M2/137‑1 (MQ=255) acgtggcatcggtcaattcattcatttgacttatacttgcctgggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACcg > 1:327635‑M2/69‑186 (MQ=255) ggcatcggtcaattcattcatttgacttatacttgcctgggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGc < 2:327631‑M2/122‑1 (MQ=255) gtcaattcattcatttgacttatacttgcctgggcaatattatcccctgcaactaatGTGa > 1:689935‑M2/58‑61 (MQ=255) attcattcatttgacttatacttgcctgggcaatattatcccctgcaactaatGTGAAAAg < 2:689928‑M2/8‑1 (MQ=255) acttttactttcctgggcaatattatcccctgcaactaatGTGAAAAGTACCATCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTgg < 1:74184‑M2/235‑1 (MQ=255) gcctgggcaatattatcccctgcaactaatGTGACAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGTTCTATCCGCTGCNCGGCGTGTNTTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGc > 1:529367‑M2/31‑261 (MQ=255) gcctgggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGANTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAgg < 1:697253‑M2/245‑1 (MQ=255) gcctgggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTAcc > 1:459493‑M2/31‑147 (MQ=255) ctgggcaatattattccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCt < 1:62391‑M2/247‑1 (MQ=255) gggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCgg < 2:459488‑M2/121‑1 (MQ=255) ggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGt > 1:243282‑M2/26‑70 (MQ=255) ggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACcgc > 2:221893‑M2/26‑144 (MQ=255) ggcaatattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTGCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCaga > 1:780339‑M2/26‑95 (MQ=255) atattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCt < 2:243278‑M2/49‑1 (MQ=255) atattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAgaagaa < 2:780330‑M2/74‑1 (MQ=255) atattatcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGca < 1:221897‑M2/123‑1 (MQ=255) tcccctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGAt > 1:99437‑M2/16‑93 (MQ=255) ctgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGcc < 2:99437‑M2/82‑1 (MQ=255) tggaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTGGCTTAATCCATATGGTTAATCAGAAGAAAGCTCGCTTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTCAAGGTGCTCTGCTCTATCCGCTGAGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGGCGACCTGGGAGAACTGACCCGTATGCGGGATGGAGTGGTGTGTGAAGGCGGGGGGGAAGGGTTGCGGa > 2:739857‑M2/11‑275 (MQ=255) tgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAattat > 1:516968‑M2/11‑45 (MQ=255) tgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGAt > 1:693603‑M2/11‑88 (MQ=255) tgcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGAATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTgcg > 2:64414‑M2/11‑164 (MQ=255) actaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCa < 2:516963‑M2/39‑1 (MQ=255) actaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGcc < 2:693596‑M2/82‑1 (MQ=255) actaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGAATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCgcggc < 1:64414‑M2/158‑1 (MQ=255) ctaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATc > 2:630978‑M2/6‑59 (MQ=255) tGTGAAAAGTACCAGCGATGTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATg > 1:648032‑M2/2‑275 (MQ=255) tGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCata < 1:630985‑M2/58‑1 (MQ=255) | GCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAGTATAAGGGGTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATG > CP009273/1613117‑1613650 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |