| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 449,933 | G→A | 11.3% | M2I (ATG→ATA) | bolA → | stationary‑phase morphogene, transcriptional repressor for mreB; also regulator for dacA, dacC, and ampC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 449,933 | 0 | G | A | 11.3% | 116.8 / 6.1 | 49 | M2I (ATG→ATA) | bolA | stationary‑phase morphogene, transcriptional repressor for mreB; also regulator for dacA, dacC, and ampC |
| Reads supporting (aligned to +/- strand): ref base G (20/21); new base A (4/2); total (25/24) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.66e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.27e-01 | |||||||||||
CCCGCCATCATAACATTGCCAACGGCGAGGGGAAGTGGGT‑AAGGCATGTAAATTCATCATGTTGACGAAATAATCGCCCCTGGTAAAAGAAACACTGATGCGAGGCCTGTGTTTCAATCTTTAAATCAGTAAACTTCATACGCTTGACGGAAAAACCAGGACGAAACCTAAATATTTGTTGTTAAGCTGCAATGGAAACGGTAAAAGCGGCTAGTATTTAAAGGGATGGATGACATCTCAGCGTTGTCGGAGGAGATATTTCATGATGATACGTGAGCGGATAGAAGAAAAATTAAGGGCGGCGTTCCAACCCGTATTCCTCGAAGTAGTGGATGAAAGCTATCGTCACAATGTCCCAGCCGGCTCTGAAAGCCATTTTAAAGTTGTGCTGGTCAGCGATCGTTTTACGGGTGAACGTTTTCTGAATCGTCATCGAATGATTTACAGTACTTTAGCGGAGGAACTCTCTACTACCGTTCATGCGCTGGCTCTGCATACTTACACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTT > CP009273/449666‑450205 | cccGCCATCATAACATTGCCAACGGCGAGGGGAAGGGGGT‑AAAGCATGTAAGTTCATCATGTTGACGAAATAATAGCACCGGGTAAAAGAAACACTGATGCGAGGCCTGTGTTTAAATCTTTAAGTCAGTAAACTTAATACGCTTGAACGACACACCAGGCCGAATCCTAACTATTAGTTGTAACGATACAATGGAAACGATCAACGCGAATAGACTTTAAAGGGATGGCTGACATCTCAGCGAGGTCGGAGGAGCTATTTCAGGAGTCTACGTg > 2:330829/1‑275 (MQ=255) gCCAACGGCGAGGGGAAGTGGGT‑AAGGCATGTAAATTCATCATGTTGACGAAATAATCGCCCCTGGTAAAAGAAACACTGATGCGAGGCCTGTGTTTCAATCTTTAAATCAGTAAACTTCATACGCTTGACGGAAAACCCAGGACAAAACCTAAATATTTGTTGTTAATCTGCAATGGAAACGGTAAAAGCGGCTAGTATTCAAAGGGATGAATAACATCTCAGAGTTGTCGGAGGAAATATTTCATGATAATACGATAGCGCATAGAaaaaaa > 1:763015/1‑274 (MQ=255) agggAAATGGGTGNAGGCATTTATATTCATTATTGTTACGAAATAATCGCTCCTCGTAAAAGAAACACATATTCGATGCCTGTGTTTCAATCTTTAAATCAGTAAACTTCATACGCTTGACGGAAAAACCAAGACAAAAGCTAAATGTTTGTTGTTAAGCTGGAATGGAAACGGGAAAAGCGGCGAATATTTAAGGTGATGGAAGACGTCTCAGCGTTGTCGGAGGGGATATTGCATGATGACACGTGAGCGGATAGAAGAAAAAATAAGggcg < 2:595184/273‑1 (MQ=255) ggT‑AAGACATGTAACTTCATCATGTTGATGAAATAATCGCCCCTTGTAAAAGAAACACTGATGCGAGGCCTGTGTTTCAATCTTTAAATCAGTAAACTTCATACGCTTGACGGAAAAACCAGGACGAAACCTAAATATTTGTTGTTAAGCTGCAATGGAAACGGTAAAAGCGGCTAGTATTTANAGGGATGGATGACATCTCAGCGTTGTCGGAGGAGATATTTCATGATGATACGTGAGCGGCTAGAAGAAAAATTAAGGGCGACGTTACAAcc > 1:595189/1‑275 (MQ=255) gAAACAATGATGAGAGGCCTGTGTTTATATCTTTATATCAGTAAGCTTCATTCGCTTGACGGAAATACCAGGACGAAAGCTAATTATTTGTTGTTAAGCTGCAATGGAAACGGTAAAAGCGGCTTGTATTTACAGGGATGGATGTCATCTCAGCGTTGTCGGAGGAGATCTTTAATTATGAAACAGGAGCAGATAGTGCATAAATTAAGGGCGTCGTCGCAACCAGTATTCCTCGAAGTAGTGGATGAAAGCCACAGTCACAATGTCACAGCCgt < 2:571636/275‑2 (MQ=255) cacTGAGGCGAGGCCTGTGTTTCAATCTTTAAATCAGTAAACTTCATACGCTGGACGGAAAAACCAGGACGAAACCTAAATATTTGTTGTTAAGCTGCAATGGAAACGGTAAAAGAGGCTAGTCTTAAAAGGGATGGATGACATATCAGCGTTGTTGGAGGAGATATTTCATGATAATACGTGAGAGAAGAGACGAAAAATGAAGGGCGACGATAGAAAACGTATAACGCGAAGGAGTGGATGAAAGCTATAGCAACAATGtacagggcgnactn > 2:217/1‑262 (MQ=255) aTGCGAGGCCTGTGTTTCAATCTTTAAATCAGTAAACTTCATACGCTTGACGGAAAAACCAGGACGAAACCTAAATATTTGTTGTTAAGCTGCAATGGAAACGGTAAAAGCGGCTAGTATTTAAAGGGATGGATGACATCTCAGCGTTGTCGGAGGAGATATTTCATGATGATACGTGAGCGGATAGAAGAAAAATTAAGGGCGGCGTTCCAACCCGTATTCCTCGAAGTAGTGGATGAAAGCTATCGTCACAATGTCCCAGCCGGCTCTGAAAg > 1:137099/1‑275 (MQ=255) tgtgAGTCCTGTGTTTCAATCTTTAAATCTGTAAACTTCATACGCTTGACGGAAAAACCAGGACGAAACCTAAATATTTGTTGTTAAGCTGCAATGGAAACGGTAAAAGCGGCTAGTATTTAAAGGGATGGATGACATCTCAGCGTTGTCGGAGGAGATATTTCATGATGATACGTGAGCGGATAGAAGAAAAATTAAGGGCGGCGTTCCAACCCGTATTCCTCGAAGTAGTGGATGAAAGCTATCGTCACAATGTCCCAGCCGGCTCTGAAAGc < 1:352507/272‑1 (MQ=255) aGGCCTGTGTTTCAATCTTTAAATCAGTAAACTTCATACGCTTGACGGAAAAACTAGGACGAAACCTAAATATTTGTTGTTAAGCTGCAATGGAAACGGTAAAAGCGGCCAGTATTTAAAGGGATGGATGACATCTCAGCGTTGTCGGAGGAGATATTTCATGATGATACGTGAGCGGAGAGAAGAAAAATTAAGGGAGGCGTTACAACCAGTATTCCTCGAAGTAGTGGATGAAGGATATGATCAAAATGTCGCAGCGGGCTCTGAAAGctttt > 2:257513/1‑271 (MQ=255) tAAACCAGTAAACTTCATACGCTTTACGGAAAAACCAGGACGAAACCTACATACTTGTTGTTAAGCTGCAATGGAAACGGTAAACACGCCTAGCATTTAAAGGGATGGAGGACATCTCAGTGGTGTCGGATGAGATATTTCATGATGATACGTGAGCGGATAGAAGAAAAATTAAGGGCGGCATTCTAACCCGTATTCATCGAAGAAGTGGATGAAAGATAGAGTCACAAAGTCCCGGCCGGCCCTGAAAGCCATTTAAAAgattttgttttctg > 2:626465/1‑262 (MQ=255) tGACGGAAAAACCAGGACGAAACCTAGATATCGATTGCTCCGCTGCATTGGAAACGCATATAGCGGTTAGAATTTAAAGGCATGGTTGACATCTCAGGGCTGTCGGAGGAGATATTTCATGATGATACGTGAGCGGATAGAAGAAAAATTAAGGGCGGCGTTCCAACCCGTATTCCTCGAAGTAGTGGATGAAAGCTATCGTCACAATGTCCCAGCCGACTCAGAAAGCCATTTTAAAGTTGTGCTGGTCAGAGATCGTTTTANCGGTGaaact > 2:66980/1‑271 (MQ=255) cGGAAAAACCAGGACGAAACCTAAATATTTGTTGTTAAGCTGCAATGGAAACGGTAAAAGCGGCTAGTATTTAAAGGGATGGATGACATCTCAGCGTTGTCGGAGGAGATATTTCATGATGATAc > 1:184736/1‑125 (MQ=255) aaaaCCAGGACGAAACCTAAATATTTGTTGTTAAGCTGCAATGGAAACGGTAAAAGCGGCTAGTATTTAAAGGGATGGATGACATCTCAGCGTTGTCGGAGGAGATATTTCATGATGATACGTGa < 2:184733/125‑1 (MQ=255) gAAACCTAAATATTTGTTGTTATGCTGCAATGGAAACGGTAAAAGCGGCTAGTAATTAAAGGGATGGATGACATCTCAGCGTTGTCGGAGGAGATATTTCATGATGATACGTGAGCGGATAGAAGAAAAATTAAGGGCGGCGTTCCAACCCGTATTCCTCGAAGTAGTGGATGAAAGCTATCGTCACAATGTCCCAGCCGGCTCTGAAAGCCATTTTAAAGTTGTGCTGGTCAGCGATCGTTTTACGGGTGAACGTTTTCTGAATCGTCATCGaa < 1:66980/275‑1 (MQ=255) catatTTGTTGTTAAGCTGCAATGGAAACGGTAAAAGCGGCTAGTATTTAAAGGGATGGATGACATCTCAGCGTTGTCGGAGGAGATATTTCATGATGATACGTGAGAGGATAGAAGAAAAATCAAGGGCGGCGTTCCAACCCGTATTCGTCGAAGTAGTGGATGAACGCTATCGTCACAATGTCCCAGCCGGCTCTGAAAGCCATTTAAAAGTTGTGCTGGTCAGTGATCGTTTTACGGGAGAACGTTTTTTGCATCTTAATTGAATGCTTTAc > 2:368259/2‑275 (MQ=255) atTTGGTGTTTAGCGGTAATTGAAACGGTAAAAGCGGCTAGTATTTAAAGGGATGGAGTACATCTCAGCGTTGTCGGAGGAGATATTTCATGATGATACGTGAACGGATAGAAGAAAAATTAAGGGCGTCGTTCCAACCCGTATTCCTCGAAGTAGTGGATGAAAGCTATCGTCACAATGTCCCAGCCGGCTCTGAAAGCCATTTTAAAGTTGTGCTGGTCAGCGATCGTTTTACGGGTGAACGTTTTCTGAATCGTCATCGAATGATTTACAg < 1:217/274‑1 (MQ=255) tgttgtTAAGCTGCAATGGAAACGGTAAAAGCGGCTAGTATTTAAAGGGATGGATGACATCTCAGCGTTGTCGGAGGAGATATTTCATGATGATACGTGAGCGGATAGAAGAACAATTAAGGGCGGCGTTCCAACCCGTATTCCTCGAAGTAGTGGATGAAAGCTATCGTCACAATGTCCCAGCCGGCTCTGAAAGCCATTTTAAAGTTGTGCTGGTCAACGATCGTTTTACGGGTGAACGTTTTCTGAATCGTCATCGAATGATTTACAGTAc > 1:43925/1‑274 (MQ=255) gttgttAAGCTGCAATGGAAACGGTAAAAGCGGCTAGTATTTAAAGGGATGGATGACATCTCAGCGTTGTCGGAGGAGATATTTCATGATGATACGTGAGCGGATAGAAGAAAAATTAAGGGCGGCGTTCCAACCCGTAt > 1:772656/1‑140 (MQ=255) gttgttAAGCTGCAATGGAAACGGTAAAAGCGGCTAGTATTTAAAGGGATGGATGACATCTCAGCGTTGTCGGAGGAGATATTTCATGATAATACGTGAGCGGATAGAAGAAAAATTAAGGGCGGCGTTCCAACCCGTATTCCTCGAAGTAGTGGAt > 2:44217/1‑157 (MQ=255) ttAAGCTGCAATGGAAACGGTAAAAGCGGCTAGTATTTAAAGGGATGGATGACATCTCAGCGTTGTCGGAGGAGATATTTCATGATGATACGTGAGCGGATAGAAGAAAAATTAAGGGCGGCGTTCCAACCCGTATTCCt < 2:772647/140‑1 (MQ=255) ttAAGCTGCAATGGAAACGGTAAAAGCGGCTAGTATTTAAAGGGATGGATGACATCTCAGCGTTGTCGGAGGAGATATTTCATGATAATACGTGAGCGGATAGAAGAAAAATTAAGGGCGGCGTTCCAACCCGTATTCCTCGAAGTAGTGGATGaaa < 1:44217/157‑1 (MQ=255) ggaaTGGAAAAGGTAAAAGCGGATATTATTTAAGGGGATGGATGACGTCTCAGCTTTGTCGGAGGATATATTTCATGATGCTACGTGAGCGGATAGAAGAAAAATTAAGGGCGGCGTTCCAACCCGTATTCCTCGAAGTAGTGGATGAAAGCTATCGTCACAATGTCCCAGCCGGCTCTGAAAGCCATTTTAAAGGTGTGCTGGTCAGCGATCGTTTTACGGGTGAACGTTTTCTGAATCGTCATCGAATGATTTACAGTACTTTAGCGGAGGaa < 1:30536/273‑1 (MQ=255) gCAATGGAAACTGTAAATGCGGCTAGTATTTATAGGGATGGATGACATCTCAGCGTTGTCGGAGGGGATATTTCATAATGATACGTGGGCGGATAGAAGAAAAAGTAAGGGCGGCGTTCCAATCCGTACTCCTCGAAGTAGTGGATGAAAGCTATCGTCACAATGTCCCAGCCGGCTCTGAAAGCCATTTTAAAGTTGTGCTGGTCAGCGATCGTTTTACGGGTGAACGTTTTCTGAATCGTCATCGAATGATTTACAGTACTTTAGCGGAGGaa < 1:722802/275‑1 (MQ=255) gCAATGGAAACGGTAAAAGCGGCTAGTATTTAAAGGGATGGATGACATCTCAGCGTTGTCGGAGGAGATATTTCATGATGATACGTGAGCGGATAGAAGAAAAAGTAAGGGCGGCGTTCCAACCCGTATTCCTCGAAGTAGTGGATGAAAGCTATCGTCACAATGTCCCAGCCGGCTCTGAAAGCCATTTTAAAGTTGTGCTGGTCAGCGATCGTTTTACGGGTGAACGTTTTCTGAATCGTCATCGAATGATTTACAGTACTTTAGCGGAGGaa < 1:257517/275‑1 (MQ=255) agaTGGAAACGGTAAAAGCGGCTATTATTTAAAGGGAGGGATGACATCTCAGTGTTGTCGGAGGAGATATTTCATGATGATACGTGAGCGGATAGAAGAAAAATTAAGGGCGGCGTTCCAACCCGTATTCCTCGAAGTAGTGGATGAAAGCTACCGTCACAATGTCCCAGCCGGCTCTGAAAGCCATTTTAAAGTTGTGCTGGTCAGCGATCGTTTTACGGGTGAACGTTTTCTTAATCGTCATCGAATGATTTACAGTACTTTAGCGGAGGaa < 1:330833/272‑1 (MQ=255) gCTAGTATTTAAAGGGATGGATGACATCTCAGCGTTGTCGGAGGAGATATTTCATGATGATACGTGAGCGGATAGAAGaaa > 1:760545/1‑81 (MQ=255) ttAGTAATAAATGGGGTGGAGGACAGCTCAGCGTTGTCGGAGGAGATATTTCATGATTATACGTTAGCTGAGAGAAGAAAAATTAAGGGCGGCGTTCCAACCCGTATTCCTCGAAGTAGTGGATGAAAGCTATCGTCACAATGTCCCAGCCGGCTCTGAAAGCCATTTTAAAGTTGTGCTGGTCAGCGATCGTTTTACGGGTGAACGGTTTCTGAATCGTCATCGAATGATTTACAGTACTTTAGCGGAGGAACTCTCTACTACCGTTCATgcgc < 2:43925/274‑1 (MQ=255) gtcctctatgaaGGGGAGGATGACAGCGCAGCGTTGTCGGAGGAGATATTTCATGAGGATACGTGGGCGGATAGAAGAAAAATTAATGGCGGCGTTCCAACCCGTATTCCTCGAAGTAGTGGATGAAAGCTATCGTCACAATGTCCCAGCCGGCGCTGAAAGCCATTTTAAAGTTGTGCTGGTCAGCGATCGTTTTACGGGTGAACGTTTTCTGAATCGTCATCGAATGATTTACAGTACTTTAGCGGAGGAACTCTCTACTACCGTTCATgcgc < 2:137099/265‑1 (MQ=255) gTATTTAAAGGGATGGATGACATCTCAGCGTTGTCGGAGGAGATATTTCATGATGATACGTGAGCGGATAGAAGAAAAAtt < 2:760536/81‑1 (MQ=255) tttAAAGGGATGGTTGTCATCTCAGCGTTGTCGGAGGAGATATTTCATGATGATACGTGATCGGAGAGAAGAAAAATTAAGGGCGGCGTTNCAACCCGTATTCCTCGAAGTAGTGGATGAAAGCTATCGTCACAATGTCCCAGCCGGCTCTGAAAGCCATTTTAAAGTTGTGCTGGTCAGCGATCGTTTTACGGGTGAACGTTTTCTGAATCGTCATCGAATGATTTACAGTACTTTAGCGGAGGGACTCTCTACTACCGTTCATGCGCTGGct < 1:626472/274‑1 (MQ=255) aGGGATGGATGACATCTCAGCGTTGTCGGAGGAGATATTTCATGATGATACGTGAGCGGATAGAAGAAAAATTAAGGGCGGCGTTCCAACCCGTATTCCTCGAAGTAGTGGATGaaa > 1:48473/1‑117 (MQ=255) gatggatgACATCTCAGCGTTGTCGGAGGAGATATTTCATGATGATACGTGAGCGGATAGAAGAAAAATTAAGGGCGGCGTTCCAACCCGTATTCCTCGAAGTAGTGGATGAAAGCTATCGTCACAATGTCACAGCCGGCTCTGAAAGCCATTTTAAAGTTGTGCTGGTCAGCGATCGTTTTACGGGTGAACGTTTTCTGAATCGTCATCGACTGATTTACAGTACTTTAGCGGAGGAACTCTCTACTACCGTTCATGCCATGGCTATGCATACt > 1:16101/1‑275 (MQ=255) gatggatgACATATCAGCGTTGTCGGAGGAGATATTTCATGATGATACGTGAGCGGATAGAAGAAAAATTAAGGGCGGCGTTCCAACCCGTATTACTCGAAGTAGTGGATGAAAGCTATCGTCACAATGTCCCAGCCGGCTCTGAAAGCCATTTTAAAGTTGTGCTGATAAGCGATCGTTTAACGGGTGAACGTTTTCTGAATAGTCATCGAATGATATACAGTACTTTATCGGAGGAACTCACTAATACCGTTCATGCGCAGGCGATGCAAACt > 1:61914/1‑275 (MQ=255) atggatgACATCTCAGCGTTGTCGGAGGAGATATTTCATGATGATACGTGAGCGGATAGAAGAAAAATTAAGGGCGGCGTTCCAACCCGTATTCCTCGAAGTAGTGGATGAAAGCTa < 2:48473/117‑1 (MQ=255) tggatgACATCTCAGCGTTGTCGGAGGAGATATTTCATGATGATACGTGAGCGGATAGAAGAAAAATTAAGGGCGGCGTTCCAACCCGTATTCCTCGAAGTAGTGGATGAAAGCTATCGTCACAATGTCCCAGCCGGCTCTGAAAGCCATTTTAAAGTTGTGCTGGTCAGCg > 2:657716/1‑172 (MQ=255) tggatgACATCTCAGCGTTGTCGGAGGAGATATTTCATGATGATACGTGAGCGGATAGAAGAAAAATTAAGGGCGGCGTTCCAACCCGTATTCCTCGAAGTAGTGGATGAAAGCTATCGTCACAATGTCCCAGCCGGCTCTGAAAGCCAGGTTAAAGTTGTGCTGGTCAGCGATCGTTTTACGGGTGAACGTTTTCTGAATCGTCATCGAATGATTTACAGTACTTTAGCGGAGGAActctct > 1:661261/1‑243 (MQ=255) tggatgACATCTCAGCGTTGTCGGAGGAGATATTTCATGATAATACGTGCGCGGATAGAAGAAAAATTAAGGGCGGCGTTCCAACCCGTATTCCTCGAAGTAGTGGATGAAAGCTATCGt > 2:25312/1‑120 (MQ=255) tgACATCTCAGCGTTGTCGGAGGAGATATTTCATGATGATACGTGAGCGGATAGAAGAAAAATTAAGGGCGGCGTTCCAACCCGTATTCCTCGAAGTAGTGGATGAAAGCTATCGTCACAATGTCCCAGCCGGCTCTGAAAGCCATTTTAAAGTTGTGCTGGTCAGCGATCg < 1:657723/172‑1 (MQ=255) tgACATCTCAGCGTTGTCGGAGGAGATATTTCATGATAATACGTGAGCGGATAGAAGAAAAATTAAGGGCGGCGTTCCAACCCGTATTCCTCGAAGTAGTGGATGAAAGCTATCGTcaca < 1:25312/120‑1 (MQ=255) cATCTCAGCGTTGTCGGAGGAGATATTTCATGATGATACGTGAGCGGATAGAAGAAAAATTAAg > 1:20954/1‑64 (MQ=255) tctcAGCGTTGTCGGAGGAGATATTTCATGATGATACGTGAGCGGATAGAAGAAAAATTAAGGGCGGCGTTCCAACCCGTATTCCTCGAAGTAGTGGATGAAAGCTATCGTCACAATGTCCCAGCCGGCTCTGAAAGCCATTTTAAAGtt > 2:468067/1‑150 (MQ=255) tcAGCGTTGTCGGAGGAGATATTTCATGATGATACGTGAGCGGATAGAAGAAAAATTAAGggcg < 2:20954/64‑1 (MQ=255) aGCGTTGTCGGAGGAGATATTTCATGATGATACGTGAGCGGATAGAAGAAAAATTAAGGGCGGCGTTCCAACCCGTATTCCTCGAAGTAGTGGATGAAAGCTATCGTCACAATGTCCCAGCCGGCTCTGAAAGCCATTTTAAAGTTGTGc < 1:468072/150‑1 (MQ=255) ttGTCGGAGGAGATATTTCATGATGATACGTGAGCGGATAGAAGAAAAATTAAGGGCGGCGTTCCAAcc > 2:233110/1‑69 (MQ=255) agacGGAGGAGATATTTCCTGATGATACGTGAGTGGATAGAAGAAAAATTAACGGCGGCGTTCCAACCCGTATTCCTCGa > 2:773709/4‑80 (MQ=255) cGGAGGAGATATTTCATGATGATACGTGAGCGGATAGAAGAAAAATTAAGGGCGGCGTTCCAACCCGTa < 1:233114/69‑1 (MQ=255) ggaggaGATATTTCATGATGATACGTGAGCGGCTAGAAGAAAAATTAAGGGCGGCGTTCCAACCCGTATTCCTCGAagta < 1:773718/80‑1 (MQ=255) atgagaTATTTCATGATGATACGTGAGCGGATAGAAGAAAAATTAAGGGCGGCGTTCCAACCCGTATTCCTCGAAGTAGTGGATGAAAGCTATCGTCACAATGTCCCAGCCGGCTCTGAAAGCCATTTTAAAGTTGTGCTGGTCAGCGATCGTTTTACGGGTGAACGTTTTCTGAATCGTCATCGAATGATTTACAGTACTTTAGCGGAGGAACTCTCTACTACCGTTCATGCGCTGGCTCTGCATACTTaca < 1:463604/251‑1 (MQ=255) atatTTCATGATGATACGTGAGCGGATAGAAGAAAAATTAAGGGCGGCGTTCCAACCCGTATTCCTCGAAGTAGTGGATGAAAGCTATCGTCACAATGTCCCAGCCGGCTCTGAAAGCCATTTTAAAGTTGTGCTGGTCAGCGATCGTTTTACGGGTGAACGTTTTCTGAATCGTCATCGAATGATTTACAGTACTTTAGCGGAGGAACTCTCTACTACCGTTCATGCGCTGGCTCTGCATACTTACACTATTAAGGAGTGGGAAGGGTTGCAg > 1:271546/1‑274 (MQ=255) atgatgATACGTGAGCGGATAGAAGAAAAATTAAGGGCGGCGTTCCAACCCGTATTCCTCGAAGTAGTGGATGAAAGCTATCGTCACAATGTCCCAGCCGGCTCTGAAAGCCATTTTAAAGTTGTGCTGGTCAGCGATCGTTTTACGGGTGAACGTTTTCTGAATCGTCATCGAATGATTTACAGTACTTTAGCGGAGGAACTCTCTACTACCGTTCATGCGCTGGCTCTGCATACt > 1:288448/1‑237 (MQ=255) tgatACGTGAGCGGATAGAAGAAAAATTAAGGGCGGCGTTCCAACCCGTATTCCTCGAAGTAGTGGATGAAAGCTATCGTCACAATGTCCCAGCCGGCTCTGAAAGCCATTTTAAAGTTGTGCTGGTCAGCGATCGTTTTACGGGTGAACGTTTTCTGAATCGTCATCGAATGATTTACAGTACTTTAGCGGAGGAACTCTCTACTACCGTTCATGCGCTGGCTCTGCATACTTaca < 2:288444/237‑1 (MQ=255) tgatACGTGAGCGGATAGAAGAAAAATTAAGGGCGGCGTTCCAACCCGTATTCCTCGAAGTAGTGGATGAAAGCTATCGTCACAATGTCCCAGCCGGCTCTGAAAGCCATTTTAAAGTTGTGCTGGTCAGCGATCGTTTTACGGGTGAACGTTTTCTGAATCGTCATCGAATGATTTACAGTACTTTAGCGGAGGAACTCTCTACTACCGTTCATGCGCTGGCTCTGCATACTTACACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCtt < 2:271542/274‑1 (MQ=255) | CCCGCCATCATAACATTGCCAACGGCGAGGGGAAGTGGGT‑AAGGCATGTAAATTCATCATGTTGACGAAATAATCGCCCCTGGTAAAAGAAACACTGATGCGAGGCCTGTGTTTCAATCTTTAAATCAGTAAACTTCATACGCTTGACGGAAAAACCAGGACGAAACCTAAATATTTGTTGTTAAGCTGCAATGGAAACGGTAAAAGCGGCTAGTATTTAAAGGGATGGATGACATCTCAGCGTTGTCGGAGGAGATATTTCATGATGATACGTGAGCGGATAGAAGAAAAATTAAGGGCGGCGTTCCAACCCGTATTCCTCGAAGTAGTGGATGAAAGCTATCGTCACAATGTCCCAGCCGGCTCTGAAAGCCATTTTAAAGTTGTGCTGGTCAGCGATCGTTTTACGGGTGAACGTTTTCTGAATCGTCATCGAATGATTTACAGTACTTTAGCGGAGGAACTCTCTACTACCGTTCATGCGCTGGCTCTGCATACTTACACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTT > CP009273/449666‑450205 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |