New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 3202572	38 (1.110)	4 (0.120)	4/304	2.4	11.0%	coding (1190/1464 nt)	ttdT	L‑tartrate/succinate antiporte
	?	CP009273	= 3202615	29 (0.900)					coding (1233/1464 nt)	ttdT	L‑tartrate/succinate antiporte
Rejected: Frequency below/above cutoff threshold.

AACAACACCGGTTTTATTAGCTGGTTTGGCAAACTGTTAGCAGGCAGCTTAAGCGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/3202445‑3202572 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccagcgcAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATA  <  CP009273/3202615‑3202580                                                                                                                                                                      AACAACACCGGTTTTATTAGCTGGTTTGGCAAACTGTTAGCAGGCAGCTTAAGCGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGC                                      >  2:493425/1‑128                                                          TATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC                                              >  1:126870/1‑63                                                              CGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCA                                          <  2:126869/63‑1                                                                   ACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGG         >  1:395613/1‑91                                                                       TGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGT     <  2:395609/91‑1                                                                               GTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGG      >  1:92238/1‑82                                                                                   CGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATA  <  2:92237/82‑1                                                                                                                                                                      AACAACACCGGTTTTATTAGCTGGTTTGGCAAACTGTTAGCAGGCAGCTTAAGCGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/3202445‑3202572 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccagcgcAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATA  <  CP009273/3202615‑3202580

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.