| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 244,782:1 | +G | 8.9% | intergenic (+161/+63) | rayT → / ← lfhA | RAYT REP element‑mobilizing transposase; TnpA(REP)/pseudogene, flagellar system protein, promoterless fragment; flagellar biosynthesis |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 244,782 | 1 | . | G | 8.9% | 165.9 / 14.0 | 45 | intergenic (+161/+63) | rayT/lfhA | RAYT REP element‑mobilizing transposase; TnpA(REP)/pseudogene, flagellar system protein, promoterless fragment; flagellar biosynthesis |
| Reads supporting (aligned to +/- strand): ref base . (21/20); new base G (2/2); total (23/22) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.04e-01 | |||||||||||
GTGAGTGATTGGCCATTCTCAACGTTCCATCGCGATGTCGCGCGAGGGTTATATCCCATCGATTGGGCGGGGGACGTAACGGATTTTAGTGCCGGGGAGCGTATCATTTCATAATTGTGCGCAGATGCCTGATGCGACGCTAGCGCGTCTTATCATGCCTACAAACTTGTGCCGGATCGGTAGGCCGGATAAGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCT‑GAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGACAGCACATGCAGCCCCGGCGCAAACAACCTTGCATAACGCGCCAGCAAAGGGCGCAGCTGCGGTGGCACCAGCAGCACCGGGTCTTTCCCCGCCGCTTTCATCTGCTCTTTCACCTGTGGCATCGTACTCTGGAACTGGTTGAGCAT > CP009273/244508‑245048 | gtgagtgaTTGGCCATTCTCAACGTTCCATCGCGATGTCGCGCGAGGGTTATATCCCATCGATTGGGCGGGGGACGTAACGGATTTTAGTGCCGGGGAGCGTATCATTTCATAATTGTGCGCAGATGCCTGATGCGACGCTAGCGCGTCTTATCATGCCTACAAACTTGTGCCGGATCGGTAGGCCGGATAAGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCt > 1:121549/1‑275 (MQ=255) aCGTTCCATCGCGATGTCGCGCGAGGGTTATATCCCATCGATTGGGCGGGGGACGTAACGGATTTTAGTGCCGGGGAGCGTATCATTTCATAATTGTGCGCAGATGCCTGATGCGACGCTAGCGCGTCTTATCATGCCTACAAACTTGTGCCGGATCGGTAGGCCGGCTAAGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGAAGCCTGATGGGACGCTGGCGCGGCTTAGCATGCCTACCAACTTGGGCCT‑GAACGGTAGGAGGGCTAAgg > 2:304803/1‑274 (MQ=255) ccATCGCGATGTCGCGCGAGGGTTATATCCCATCGCTTGGGCGGGGGACGTAACGGATTTTAGTGCCGGGGAGCGTATCATTTCATAATTGTGCGCAGATGCCTGATGCGACGCTAGCGCGTCTTATCATGCCTACAAACTTGTGCCGGATCGGTAGGCCGGATAAGGCGTTTATGCCCCATCCGGCAGTTATGCTCAGATGCCTGATGCGACGCTCGCGCGTCTTAACATTCCCACAACCTTGTGCCT‑GACCGGTAGGCCGGAGNAGGCggcct > 2:277354/1‑271 (MQ=38) ccATCGCGATATCGCGCGAGGGTTATATCCCATCGATTGGGCGGGGGACGTAACGGATTTTAGTGCCGGGGAGCGTATCATTTCATAATTGTGCGCAGATGCCTGATGCGACGCTAGCGCGTCTTATCATGCCTACAAACTTGTGCCGGATCGGTAGGCCGGATAAGGCGTTTATGCCGCATCCGGCCGTTATGCGCATATGCCTGATGCGATGCTGGCCCGTCTTCTTATGCCCACAAACTTGGGCCT‑GAACGGTAGGAccttaaaggtgagg > 2:105129/1‑261 (MQ=38) ctcggacttgatatCCCATCGATTGGGCGGGGGACGTAACGGATTTTAGTGCCGGGGATCGTATCATTTAATAATTGTGCGCAGATGCCTGATGCGAAGCTAGCGCGTCTTATCATGCCTACAAAATTGTGCCGGATCGGTAGGCCGGATAAGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCT‑GAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGc < 2:121548/264‑1 (MQ=255) ccgtagagtggaagggggAAGTANGGGGTTTTGGTGCCGGGGGGCAGATCATTTCATAATTGTGCGCAGATGCCTGATGCGACGCTAGCGGGTCTTTTCATGCCTACAAACTTGTGCCGGAGCGGTAGGCCGGATAAGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCT‑GAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATg < 2:432286/261‑1 (MQ=25) ggCGGGGGACGTAACGGATTTTAGTGCCGGGGAGCGTATCATTTCATAATTGTGCGCAGATGCCTGATGCGACGCTAGCGCGTCTTATCATGCCTACAAACTTGTGCCGGATCGGTAGGCCGGATAAGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTTCCT‑GAACGGTAGGACGGATAAGGCGTTCACGCCGCAACCGGCCGTTGTTCACCaagtcttgattcct > 2:642420/1‑262 (MQ=255) ggCGGGGGACGTAACGGATTTTAGTGCCGGGGAGCGTATCATTTCATAATTGTGCGCAGATGCCTGATGCGACGCTAGCGCGTCTTATCATGCCTACAAACTTGTGCCGGATCGGTAGGCCGGATAAGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCATGATGCGACGCTGGCGCGTCTTATAATGCCTACACACGTGTGCCT‑GAACGGTAGGCCGGATAAGGCGGCAACGACGCACCCGGCCGTTGCGCCCCAATCCTGGCTaatg > 2:299911/1‑271 (MQ=37) gACGTAACTGATTTTAGTGCCGGGGAGCGTATCATTTCATAATTGTGCGCAGATGCCTGATGCGACGCTAGCGCGTCTTATCATGCCTACAAACTTGTGCCGGATCGGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCT‑GAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAAc < 1:642434/275‑1 (MQ=255) ggcttttcatGCCGGGGAGCGTATACTTTCATGATGGTGCGCAGATGCCTGGTGCGGCGCTAGCGCGTCTTATCATGCCTACAACCTTGTGCCGGATCGGTAGGCCGGATAAGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCT‑GAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCa < 2:520894/265‑1 (MQ=37) aTTTTAGTGCCGGGGAGCGTATCATTTCATAATTGTGCGCAGATGCCTGATGCGACGCTAGCGCGTCTTATCATGCCTACAAACTTGTGCCGGATCGGTAGGCCGGATAAGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCT‑GAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATaa < 1:304808/275‑1 (MQ=255) ccGGGGAGCGTATCAGTTCATAATGGTGCGCAGATGCCTGATGCGACGCTAGCGCGTCTTATCATGCCTACAAACTTGTGCCGGATCGGTAGGCCGGATAAGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCN‑GAACGTTAGGACGGATAAGGCGTTCCCGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGcc > 1:520903/1‑259 (MQ=255) attaTTGTGCGCAGATGCCTGATGCGACGCTAGCGCGTCTTATCATGCCTACAAACTTGTGCCGGATCGGTAGGCCGGATAAGGAGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTAGCATGCCTACAAACTTGTGCCT‑GAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACtt < 1:277358/271‑1 (MQ=255) atcaTTGTGTGCAGATGCCTGATGCGTCGCTAGCGCGTCTTATCATGCCTACAAACTTGTGCCGGATCGGTAGGCCGGATAAGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCT‑GAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACtt < 1:310190/271‑1 (MQ=255) cTAGCGCGTCTTATCATGCCTACAAACTTGGGCCGGATCGGTAGGCCGGATAAGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCT‑GAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGACAGCACATGCAGCCCCg < 1:105130/272‑1 (MQ=255) ccTACAAACTTGTGCCGGATCGGTAGGCCGGATAAGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCT‑GAACGGTAGGACGGATAAGGCGTTCAcgc > 1:596805/1‑147 (MQ=255) ccTACAAACTTGTGCCGGATCGGTAGGCCGGATAAGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCT‑GAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTtgt > 1:475098/1‑163 (MQ=255) tACAAACTTGTGCCGGATCGGTAGGCCGGATAAGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCT‑GAACGGTAGGACGGATAAGGCg > 1:499715/1‑138 (MQ=255) cAAACTTGTGCCGGATCGGTAGGCCGGATAAGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCT‑GAACGGTAGGACGGATAAGGCGTTCACGCCGCa < 2:596792/147‑1 (MQ=255) cAAACTTGTGCCGGATCGGTAGGCCGGATAAGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCT‑GAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCAc < 2:475090/163‑1 (MQ=255) aaCTTGTGCCGGATCGGTAGGCCGGATAAGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCT‑GAACGGTAGGACGGATAAGGCGTTCa < 2:499706/138‑1 (MQ=255) gATCGGTAGGCCGGATAAGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCT‑GAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCGCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGACAGCACATGCAGCCCCGGCGCAAACAACCTGGCATAACGCGCCAGCAAAGGgcg > 1:405672/1‑274 (MQ=255) cGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCGGGCGCGTCTTATCATGCCTACAAACTTGTGCCT‑GAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAATGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTAGACGACAGCACATGCAGCCCCGGCGCAAACAACCTTACATAACGCGCCAGCAAAGAGCACAGCTGCGAAGGCACcagca > 1:703376/1‑274 (MQ=255) gcattgaTGCGCAGTTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCT‑GAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACTTCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGACAGCACATGCAGCCCCGGCGCAAACAACCTTGCATAACGCGCCAGCAAAGGGCGCAGCTGCGGTGGCACCAGCAGCACCGGGTCTTTCCccg < 1:299916/269‑1 (MQ=255) ttATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCT‑GAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGACAGCACATGCAGCCCCGGCGCa > 1:142017/1‑201 (MQ=255) gcgcAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCT‑GAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGACAGCACATGCAGCCCCGGCGCAaaca < 2:142016/201‑1 (MQ=255) aTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCT‑GAACGGt > 2:339457/1‑57 (MQ=255) cTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCT‑GAACGGTAGGa < 1:339463/57‑1 (MQ=255) cGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCT‑GAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTg > 1:471977/1‑97 (MQ=255) gCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCT‑GAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATa < 2:471969/97‑1 (MQ=255) ggCGCGTCTTATCATGCCTACAAACTTGTGCCT‑GAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCAcc > 1:90006/1‑83 (MQ=255) ggCGCGTCTTATCATGCCTACAAACTTGTGCCT‑GAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAAGGCTGGATACTTACAGCAACGCCCCCATAATCGTCAACTCCAGCTCATCCGGCACTTCGTTATACGACAGCACATGCAGCCCCGGCGCAAACAACCTTGCATAACGCGCCAGCAAAGGGCGCAGCTGCGGTGGCACCAGCAGCACCGGGTCTGTCCCCGCCGCTTTCATCTGCTCTGTCACCTGTGGCa < 1:134588/274‑1 (MQ=255) cgcgTCTTATTATGCCTACAAACTTGTGCCT‑GAACGGTATGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGACAGCACATGCAGCCCCGGCGCAAACAACCTTGCATAACGCGCCAGCAAAGGGCGCAGCTGCGGTGGCACCAGCAGCACCGGGTCTTTCCCCGCCGCTTTCATCTGCTCTTTCACCTGTGGCATCg < 1:441025/275‑1 (MQ=255) cgTCTTATCATGCCTACAAACTTGTGCCT‑GAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATg < 2:90005/83‑1 (MQ=255) tCTTATCATGCCTACAAACTTGTGCCTGGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGTACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTtat > 2:466596/1‑143 (MQ=255) tCTTATCATGCCTACAAACTTGTGCCTGGAACGGTAGGACGGATAAGGCGTTCAAGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACCTCACCGCCCCCATAATCTTCAACTCCAGCTCATCCGTCACTTCGTtat > 2:710976/1‑143 (MQ=37) aTCATGCCTACAAACTTGTGCCTGGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGTACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGa < 1:466603/143‑1 (MQ=255) aTCATGCCTACAAACTTGTGCCTGGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGa < 1:710990/143‑1 (MQ=255) ccTACAAACTTGTGCCT‑GAACGGTAGGACGGAAAAGCCGTCCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAAAGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGACAGCAAATGCAGCCCCGGCGCAAACAACCTTGCCTAACGCGCCAGCAAAGGGCGCAGCGGCGGCGGCAACAGCAGCACAGGGTCTTTCCCCACCGCTTTAATCAGCCCTTGAACCCGTGGCATCGAACTCTGGTACggg > 2:670810/1‑275 (MQ=255) cTACAAACTTGTGCCT‑GAACGGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACCCCAGCTCATCCGGCACTTCGTTATACGACAGCACATGCAGCCCCGGCGCAAACAACCTTGCATAACGCGCCAGCAAAGGGCGCAGCTGCGGTGGCACCAGCAGCACCGGGTCTTTCCCCGCCGCTTTCATCTGCTCTTTCACCTGTGGCATCGTACTCTGGAACTGGt < 1:199159/275‑1 (MQ=255) cAAACTTGTGCCT‑GAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATCATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGACAGCACATGCAGCCCCGGCGCAAACAACCTTCCATAACGCGCCAGCCAAGGGCGCAGCTGCGGTGGCACCAGCAGCACCCGGTCTTTCCCCCCCGCTCTCACTCGCTCTCTCCCCTTGGGCATCGGActctcgcaccgtcttg > 2:622393/1‑263 (MQ=255) aCTTGTGCCT‑GAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATg > 2:339952/1‑64 (MQ=255) tgtgCCT‑GAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAGCGCCCCCATAATATTCAACTACAGCACATCCGGCACTTCGTTATACGACAGCACAAGCAGCCCCGGCGCAAACAACCTTGCCTAACGCGCCAGCAAAGGGAGCAGCTGCGCGGGCAACAACACCACAGAGTCTTGCCCCGCCACCTCCATCCGCTCTTTCACCTGTGCCACCGTACTCTGGaannnngcgcgnct > 2:52945/1‑261 (MQ=255) gtgCCT‑GAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTgg < 1:339958/64‑1 (MQ=255) tgCCT‑GAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGt > 1:320644/1‑47 (MQ=255) tgCCT‑GAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGACAGCCCATGCAGCCCCGGCGCAAACAACCTTGCATAACGCGCCAGCAAAGGGCGCAGCTGCGGTGGCACCAGCAGCACCGGGTCTTTCCCCGCCGCTTTc > 1:153913/1‑224 (MQ=255) t‑GAACGGTAGGACGGATAAGGCGTTCACGCCGCGTCCGGCAGTtgtg < 2:320638/47‑1 (MQ=255) | GTGAGTGATTGGCCATTCTCAACGTTCCATCGCGATGTCGCGCGAGGGTTATATCCCATCGATTGGGCGGGGGACGTAACGGATTTTAGTGCCGGGGAGCGTATCATTTCATAATTGTGCGCAGATGCCTGATGCGACGCTAGCGCGTCTTATCATGCCTACAAACTTGTGCCGGATCGGTAGGCCGGATAAGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCT‑GAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGACAGCACATGCAGCCCCGGCGCAAACAACCTTGCATAACGCGCCAGCAAAGGGCGCAGCTGCGGTGGCACCAGCAGCACCGGGTCTTTCCCCGCCGCTTTCATCTGCTCTTTCACCTGTGGCATCGTACTCTGGAACTGGTTGAGCAT > CP009273/244508‑245048 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |