Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
JC JC	CP009273	982,319	IS2 (+) +5 bp	100%	coding (116‑120/1089 nt)	ompF ←	outer membrane porin 1a (Ia;b;F)

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	982319 =	0 (0.000)	40 (1.000)	30/310	NT	100%	coding (120/1089 nt)	ompF	outer membrane porin 1a (Ia;b;F)
	?	CP009273	1462167 =	NA (NA)					noncoding (1331/1331 nt)	IS2	repeat region
*	?	CP009273	= 982323	0 (0.000)	41 (1.020)	30/310	NT	100%	coding (116/1089 nt)	ompF	outer membrane porin 1a (Ia;b;F)
	?	CP009273	= 1463497	NA (NA)					noncoding (1/1331 nt)	IS2	repeat region

GCAGACACATAAAGACACCAAACTCTCATCAATAGTTCCGTAAATTTTTATTGACAGAACTTATTGACGGCAGTGGCAGGTGTCATAAAAAAAACCATGAGGGTAATAAATAATGATGAAGCGCAATATTCTGGCAGTGATCGTCCCTGCTCTGTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/982550‑982319 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGTAGTCACGCTTTATCGTTTTCACGAAGCTCTCTGCTATTCCGTTACTCTCCGGACTCCGCACCGCCGTGTTCT  >  CP009273/1462167‑1462425                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GCAGACACATAAAGACACCAAACTCTCATCAATAGTTCCGTAAATTTTTATTCACAGAACTTATTGACGGCAGTGGCAGGGGTCATAAAAAAAACCATGAGGGTAATAAATAATGATGAAGCGCAATATTCTGTCAGTGATCGTCCCTGCTCTGTTAGTAGCCGGTACTGCAAACGCTGCAGAAATCTATAACAAAAATGTCAACAAAGTAGATCTGTACGGTAAAGCTCATTGAATTTTCCCGTATATTTTCCGCCATCTatatttttttta                                                                                                                                                                                                                            >  2:587789/1‑261                                                 TATTGACAGAACTTATTGACGGCAGTGGCAGGTGTCATAAAAAAAACCATGAGGGTAATAAATAATGATGAAGCGCAATATTCTGGCAGTGATCGTCCCTGCTCTGTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTTGGATTTGCCCCTATATTTCCAG                                                                                                                                                                                                                                              >  2:299739/1‑207                                                     GACAGAACTTATTGACGGCAGTGGCAGGTGTCATAAAAAAAACCATGAGGGTAATAAATAATGATGAAGCGCAATATTCTGGCAGTGATCGTCCCTGCTCTGTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTTGGATTTGCCCCTATATTTCCAGACAT                                                                                                                                                                                                                                          <  1:299744/207‑1                                                                TTGATGGAAGTGGCAGGTGTCATAAAAAAAACCATGAGGGTAATAAATAATGATGAAGCGCAATATTCGGGCAGGGATCGTCCCTGCTCTGTTAGTAGCAGGTACTGCAAACGCTGCAGNAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTTGGATGTGCCCCGATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATCCCCGTGGCGAGCGATAACCCAGCGCACTATGCG                                                                                                                                                              <  1:634208/272‑1                                                                                                          ATAAATAATGATGAAGCGCAATATTCTGGCAGTGATCGTCCCTGCTCTGTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTT                                                                                                                                                                                                                              >  1:272874/1‑166                                                                                                              ATAATGATGAAGCGCAATATTCTGGCAGTGATCGTCCCTGCTCTGTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACC                                                                                                                                                                                                                          <  2:272870/166‑1                                                                                                                AATGATGAAGCGCAATATTCTGGCAGTGATCGTCCCTGCTCTGTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCG                                                                                                           >  1:441059/1‑275                                                                                                                AATGATGAAGCGCAATATTCTGGCAGTGATCGTCCCTGCTCTGTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGATTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAAACCATTACAAGCCCGCTGCCGCGGATATTCCCGTGGCGAGCGATAAC                                                                                                                                                                             >  1:180880/1‑209                                                                                                                 ATGATGAAGCGCAATATTCTGGCAGTGATCGTCCCTGCTCTGTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGATCAATAACCCAGCACAATATGCGGACGCCAATCGGTCAACAGCTTCACCGCCTCTGCCAGTGTCTTTGtat                                                                                                              >  2:181140/1‑268                                                                                                                       AAGCGCAATATTCTGGCAGTGATCGTCCCTGCTCTGTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTTGGAT                                                                                                                                                                                                                                                                >  1:491860/1‑119                                                                                                                           GCAATATTCTGGCAGTGATCGTCCCTGCTCTGTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTTGGATTTGC                                                                                                                                                                                                                                                            <  2:491851/119‑1                                                                                                                                      GCAGTTATCGTCCCTGCTCTGTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTTGGATTTGCCCCTATATTTCCAGATATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTCACCCCGTCTGGTTTGGGCA                                                                                      <  1:587802/274‑1                                                                                                                                      GCAGTGATCGTCCCTGCTCTGTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTTGGATTTGCCCCTATATTTCCAGACATC                                                                                                                                                                                                                                         >  1:251433/1‑127                                                                                                                                         GTGATCGTCCCTGCTCTGTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTTGGATTTGCCCCTATATTTCCAGACATCTGTTAT                                                                                                                                                                                                                                   >  2:307156/1‑130                                                                                                                                          TGATCGTCCCTGCTCTGTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTTGGATTTGCCCCTATATTTCCAGACATCTGTT                                                                                                                                                                                                                                     <  2:251430/127‑1                                                                                                                                             TCGTCCCTGCTCTGTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACT                                                                                                                                                                                                                               <  1:307161/130‑1                                                                                                                                                TCCCTGCTCTGTTAGTAGCAGGTACTGCATACGCTGCAGACATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTTGGATTTGCCCCCATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTCCCGCAGATCTTCCCGTGGCGAGCGATAACCCAGCGCACTCTGCGGCTGCCATTCGTTATCATGCTCGAACGCCTCTGAAAGGTTCGTTGCTGCCGTTAACCCGTCGGGTTTGGTCATGATACTc                                                                              >  2:331000/1‑271                                                                                                                                                    TGCTCTGTTAGTAGCAGGTACTGCAAACGCTGCATAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTT                                                                                                                                                                                                                              >  1:494893/1‑124                                                                                                                                                    TGCTCTGTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTTGGATTTGCCC                                                                                                                                                                                                                                                          >  2:397329/1‑96                                                                                                                                                      CTCTGTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACACGCCCGCTTCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCTCTATGCGGATGCCATACGTTATAATGCTCGAACTACTCTGCAAGGTTCATTGCTGTCGTTAACTCGTCTGGTTTGGGCTTGATtatgttttcggaa                                                                     >  2:192287/1‑262                                                                                                                                                        CTGTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACC                                                                                                                                                                                                                          <  2:494884/124‑1                                                                                                                                                        CTGTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTTGGATTTGCCCCTAT                                                                                                                                                                                                                                                      <  1:397336/96‑1                                                                                                                                                                AGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTG                                                                                               >  2:432609/1‑239                                                                                                                                                                   AGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGTAGTCACGCTTTATCG                                                           >  1:604333/1‑272                                                                                                                                                                   AGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCAC                                                                                                                                                                                                                                >  1:318573/1‑107                                                                                                                                                                    GGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTT                                                                                           <  1:432616/239‑1                                                                                                                                                                       ACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAA                                                                                                                                                                                                                            <  2:318567/107‑1                                                                                                                                                                              ACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGTAGTCACGCTTTATCGTTTTCACGAAGCT                                              <  1:192289/274‑1                                                                                                                                                                                gagGCAGAAATATCTAAAAAAGANGGCAACATAGTAGATCTGTACCGTAAAGCTGTTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGTAGTCACGCTTTATCGTTTTCACGAAGCTCT                                            <  2:441052/271‑1                                                                                                                                                                                         ATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAG                                                                                                                                                                                                                 >  1:410822/1‑100                                                                                                                                                                                             ATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCG                                                                                                                                                                                                             <  2:410815/100‑1                                                                                                                                                                                                    AGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTTGGATTTGCCCCTATATTTCCAGACATCTGTTAT                                                                                                                                                                                                                                   >  2:291776/1‑71                                                                                                                                                                                                      ATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTTGGAT                                                                                                                                                                                                                                                                >  1:307811/1‑40                                                                                                                                                                                                        GGCAACAAAGTAGATCTGTACGGTAAAGCTGTTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACT                                                                                                                                                                                                                               <  1:291781/71‑1                                                                                                                                                                                                          CAACAAAGTAGATCTGTACGGTAAAGCTGTTTGGATTTGC                                                                                                                                                                                                                                                            <  2:307806/40‑1                                                                                                                                                                                                                         GTACGGTAAAGCTGTTTGGATTTGCCCCTATATTTCCAG                                                                                                                                                                                                                                              >  1:715097/1‑39                                                                                                                                                                                                                          TACGGTAAAGCTGTTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAAC                                                                                                                                                                             >  1:60023/1‑103                                                                                                                                                                                                                          TACGGTAAAGCTGTTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCT                                                                                                                                                                                                           >  2:4296/1‑73                                                                                                                                                                                                                          TACGGTAAAGCTGTTTGGATTTGCCCCTATATTTCCAGACATCTGGTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATCATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCTTTCACCCGTCTGGTTTGGGCATGATACTGCTGTAGTCACGCTTTATCGTTTTCCCGAAGATCTCTTCTATTCCGTTACTCTCCGTACTCCGCACCGCCGTTTTCT  >  1:115516/1‑274                                                                                                                                                                                                                             GGTAAAGCTGTTTGGATTTGCCCCTATATTTCCAGACAT                                                                                                                                                                                                                                          <  2:715083/39‑1                                                                                                                                                                                                                              GTAAAGCTGTTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAG                                                                                                                                                                         <  2:60022/103‑1                                                                                                                                                                                                                              GTAAAGCTGTTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCG                                                                                                                                                                                                       <  1:4296/73‑1                                                                                                                                                                                                                                    CTGTTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGT                                                                          >  2:333278/1‑192                                                                                                                                                                                                                                        TTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGTAGTC                                                                      <  1:333284/192‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GCAGACACATAAAGACACCAAACTCTCATCAATAGTTCCGTAAATTTTTATTGACAGAACTTATTGACGGCAGTGGCAGGTGTCATAAAAAAAACCATGAGGGTAATAAATAATGATGAAGCGCAATATTCTGGCAGTGATCGTCCCTGCTCTGTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/982550‑982319 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGTAGTCACGCTTTATCGTTTTCACGAAGCTCTCTGCTATTCCGTTACTCTCCGGACTCCGCACCGCCGTGTTCT  >  CP009273/1462167‑1462425

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.